Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000934g0120 Nicotiana tabacum HOM05D003933 ORTHO05D004746 2.0e-236 822.0 401 100.0
Nitab4.5_0004707g0060 Nicotiana tabacum HOM05D003933 ORTHO05D004746 4.2e-202 708.0 391 89.3
CAN.G1054.19 Capsicum annuum HOM05D003933 ORTHO05D004746 2.5e-186 655.6 401 80.5
Peaxi162Scf00081g01011 Petunia axillaris HOM05D003933 ORTHO05D004746 1.6e-182 642.9 399 79.2
PGSC0003DMG400021516 Solanum tuberosum HOM05D003933 ORTHO05D004746 9.0e-181 637.1 399 79.4
Solyc04g078160.4 Solanum lycopersicum HOM05D003933 ORTHO05D004746 3.2e-178 628.6 400 79.2
Sopen04g031790 Solanum pennellii HOM05D003933 ORTHO05D004746 4.3e-175 618.2 409 77.5
Nitab4.5_0000569g0090 Nicotiana tabacum HOM05D003933 ORTHO05D004746 1.1e-167 593.6 400 72.2
CAN.G107.7 Capsicum annuum HOM05D003933 ORTHO05D004746 9.7e-167 590.5 401 72.3
Nitab4.5_0003643g0030 Nicotiana tabacum HOM05D003933 ORTHO05D004746 3.7e-166 588.6 400 72.2
PGSC0003DMG402011550 Solanum tuberosum HOM05D003933 ORTHO05D004746 8.2e-166 587.4 400 71.8
Solyc12g088450.3 Solanum lycopersicum HOM05D003933 ORTHO05D004746 1.1e-165 587.0 400 71.8
Cc11_g08880 Coffea canephora HOM05D003933 ORTHO05D004746 1.4e-152 543.5 400 66.0
Thecc.02G159300 Theobroma cacao HOM05D003933 ORTHO05D004746 4.4e-151 538.5 400 66.2
CSS0045284 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 5.7e-151 538.1 402 65.7
CSS0043425 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 4.8e-150 535.0 402 65.4
Peaxi162Scf00160g00123 Petunia axillaris HOM05D003933 ORTHO05D004746 1.1e-149 533.9 357 73.1
MSTRG.890 Avicennia marina HOM05D003933 ORTHO05D004746 7.0e-149 531.2 415 64.3
Duzib277G0001 Durio zibethinus HOM05D003933 ORTHO05D004746 1.2e-148 530.4 400 66.0
COL.COLO4_08591 Corchorus olitorius HOM05D003933 ORTHO05D004746 2.0e-148 529.6 401 65.1
Duzib132G1110 Durio zibethinus HOM05D003933 ORTHO05D004746 1.0e-147 527.3 400 65.8
MD13G1004400 Malus domestica HOM05D003933 ORTHO05D004746 1.7e-147 526.6 400 64.5
SGA_v2.0_scaffold38G15064 Striga asiatica HOM05D003933 ORTHO05D004746 2.9e-147 525.8 402 64.4
Lj6A748G52 Lonicera japonica HOM05D003933 ORTHO05D004746 1.9e-146 523.1 400 65.8
RcHm_v2.0_Chr4g0446781 Rosa chinensis HOM05D003933 ORTHO05D004746 1.9e-146 523.1 400 62.5
QL05p009967 Quercus lobata HOM05D003933 ORTHO05D004746 2.5e-146 522.7 401 65.8
Migut.L00761 Erythranthe guttata HOM05D003933 ORTHO05D004746 3.2e-146 522.3 407 63.6
Potri.005G092000 Populus trichocarpa HOM05D003933 ORTHO05D004746 4.2e-146 521.9 400 64.0
TWI77G0671 Tripterygium wilfordii HOM05D003933 ORTHO05D004746 5.5e-146 521.5 406 64.3
Cfa008748 Carpinus fangiana HOM05D003933 ORTHO05D004746 9.4e-146 520.8 403 64.0
Ciclev10031732m.g Citrus clementina HOM05D003933 ORTHO05D004746 9.4e-146 520.8 400 65.0
Duzib248G0690 Durio zibethinus HOM05D003933 ORTHO05D004746 1.6e-145 520.0 400 63.0
SalBow8G0218 Salvia bowleyana HOM05D003933 ORTHO05D004746 2.7e-145 519.2 402 62.7
DCAR_007284 Daucus carota HOM05D003933 ORTHO05D004746 1.8e-144 516.5 400 63.2
Gorai.013G069800 Gossypium raimondii HOM05D003933 ORTHO05D004746 1.2e-143 513.8 400 62.8
FAN07G0849 Fragaria x ananassa HOM05D003933 ORTHO05D004746 4.4e-143 511.9 400 61.2
Gohir.A13G060600 Gossypium hirsutum HOM05D003933 ORTHO05D004746 4.4e-143 511.9 400 63.0
FvH4_4g36990 Fragaria vesca HOM05D003933 ORTHO05D004746 7.5e-143 511.1 400 61.2
Prupe.1G348200 Prunus persica HOM05D003933 ORTHO05D004746 9.8e-143 510.8 400 62.0
Atru.chr11.1157 Acer truncatum HOM05D003933 ORTHO05D004746 1.3e-142 510.4 400 63.5
PGR142G4240 Punica granatum HOM05D003933 ORTHO05D004746 1.7e-142 510.0 402 63.2
Rhsim09G0099700 Rhododendron simsii HOM05D003933 ORTHO05D004746 2.8e-142 509.2 396 64.4
Actinidia14952 Actinidia chinensis HOM05D003933 ORTHO05D004746 1.1e-141 507.3 404 63.1
ClCG10G012050 Citrullus lanatus HOM05D003933 ORTHO05D004746 1.4e-141 506.9 400 63.8
Gohir.D13G061300 Gossypium hirsutum HOM05D003933 ORTHO05D004746 4.1e-141 505.4 400 61.8
vmacro10631 Vaccinium macrocarpon HOM05D003933 ORTHO05D004746 3.5e-140 502.3 444 59.2
TAR629G2222 Trochodendron aralioides HOM05D003933 ORTHO05D004746 1.0e-139 500.7 401 62.3
ECA234G4145 Erigeron canadensis HOM05D003933 ORTHO05D004746 5.0e-139 498.4 401 61.8
Eucgr.J00872 Eucalyptus grandis HOM05D003933 ORTHO05D004746 8.6e-139 497.7 401 62.1
Manes.08G053300 Manihot esculenta HOM05D003933 ORTHO05D004746 4.3e-138 495.4 400 62.2
Manes.09G017800 Manihot esculenta HOM05D003933 ORTHO05D004746 2.8e-137 492.7 401 61.3
Aqoxy5G00269 Aquilegia oxysepala HOM05D003933 ORTHO05D004746 4.7e-137 491.9 401 61.1
AUR62032977 Chenopodium quinoa HOM05D003933 ORTHO05D004746 1.2e-135 487.3 414 60.4
HanXRQChr12g0377651 Helianthus annuus HOM05D003933 ORTHO05D004746 2.0e-135 486.5 401 60.8
vmacro10628 Vaccinium macrocarpon HOM05D003933 ORTHO05D004746 2.0e-135 486.5 445 57.5
Hund08600 Selenicereus undatus HOM05D003933 ORTHO05D004746 3.4e-135 485.7 404 62.1
EL10Ac9g22955 Beta vulgaris HOM05D003933 ORTHO05D004746 4.4e-135 485.3 407 61.4
Aa31LG3G18300 Aethionema arabicum HOM05D003933 ORTHO05D004746 2.2e-134 483.0 407 61.2
CsaV3_3G031790 Cucumis sativus L. HOM05D003933 ORTHO05D004746 2.9e-134 482.6 405 61.0
THA.LOC104800863 Tarenaya hassleriana HOM05D003933 ORTHO05D004746 4.9e-134 481.9 404 60.4
Lsat_1_v5_gn_4_15060 Lactuca sativa HOM05D003933 ORTHO05D004746 1.4e-133 480.3 410 60.7
AL6G34400 Arabidopsis lyrata HOM05D003933 ORTHO05D004746 3.2e-133 479.2 402 60.7
Carub.0006s2098 Capsella rubella HOM05D003933 ORTHO05D004746 4.1e-133 478.8 402 61.2
Lalb_Chr10g0094951 Lupinus albus HOM05D003933 ORTHO05D004746 7.0e-133 478.0 400 59.0
PSO063G7666 Papaver somniferum HOM05D003933 ORTHO05D004746 7.0e-133 478.0 406 60.6
PSO782G2797 Papaver somniferum HOM05D003933 ORTHO05D004746 7.0e-133 478.0 406 60.8
Sed0001276 Sechium edule HOM05D003933 ORTHO05D004746 1.6e-132 476.9 396 61.1
CARHR190340 Cardamine hirsuta HOM05D003933 ORTHO05D004746 2.7e-132 476.1 404 60.4
AT5G23200 Arabidopsis thaliana HOM05D003933 ORTHO05D004746 4.6e-132 475.3 402 59.7
Thhalv10004353m.g Eutrema salsugineum HOM05D003933 ORTHO05D004746 4.6e-132 475.3 404 60.6
arahy.Tifrunner.gnm1.ann1.2XRJ77 Arachis hypogaea HOM05D003933 ORTHO05D004746 1.7e-131 473.4 403 59.1
CANSAT78G0638 Cannabis sativa HOM05D003933 ORTHO05D004746 3.0e-131 472.6 401 57.6
Glyma.09G282800 Glycine max HOM05D003933 ORTHO05D004746 3.9e-131 472.2 404 59.7
arahy.Tifrunner.gnm1.ann1.J5HH0A Arachis hypogaea HOM05D003933 ORTHO05D004746 8.6e-131 471.1 403 58.8
TPR.G29790 Trifolium pratense HOM05D003933 ORTHO05D004746 1.1e-130 470.7 400 58.5
Haze_11764 Corylus avellana HOM05D003933 ORTHO05D004746 1.5e-130 470.3 418 57.2
Phvul.003G004900 Phaseolus vulgaris HOM05D003933 ORTHO05D004746 1.9e-130 469.9 403 59.8
Os02g0634600 Oryza sativa ssp. japonica HOM05D003933 ORTHO05D004746 2.5e-130 469.5 406 59.9
Psat6g135760 Pisum sativum HOM05D003933 ORTHO05D004746 1.6e-129 466.8 400 57.8
MELO3C024011.2 Cucumis melo HOM05D003933 ORTHO05D004746 1.4e-128 463.8 401 59.4
Sp2g23940 Schrenkiella parvula HOM05D003933 ORTHO05D004746 4.0e-128 462.2 402 59.0
C07p44350 Brassica napus HOM05D003933 ORTHO05D004746 8.9e-128 461.1 403 60.5
BolC7t44956H Brassica oleracea HOM05D003933 ORTHO05D004746 8.9e-128 461.1 403 60.5
BraA03t13757Z Brassica rapa HOM05D003933 ORTHO05D004746 1.2e-127 460.7 403 59.8
A03p46330 Brassica napus HOM05D003933 ORTHO05D004746 2.9e-126 456.1 403 58.8
Ca_07914_v3 Cicer arietinum L. HOM05D003933 ORTHO05D004746 6.4e-126 454.9 396 57.6
Medtr1g037570 Medicago truncatula HOM05D003933 ORTHO05D004746 1.9e-125 453.4 400 56.5
CANSAT11G2660 Cannabis sativa HOM05D003933 ORTHO05D004746 7.0e-125 451.4 400 57.8
Lj2g0026122 Lotus japonicus HOM05D003933 ORTHO05D004746 1.6e-124 450.3 400 57.2
DCAR_030211 Daucus carota HOM05D003933 ORTHO05D004746 6.0e-124 448.4 363 60.1
unitig_26.g10014 Utricularia gibba HOM05D003933 ORTHO05D004746 1.7e-123 446.8 388 58.2
Hma1.2p1_0933F.1_g238310 Hydrangea macrophylla HOM05D003933 ORTHO05D004746 3.0e-123 446.0 432 55.1
Hma1.2p1_2428F.1_g321995 Hydrangea macrophylla HOM05D003933 ORTHO05D004746 3.0e-123 446.0 432 55.1
VMungo0251G2024 Vigna mungo HOM05D003933 ORTHO05D004746 3.0e-123 446.0 425 55.5
Cpa.g.sc0.130 Carica papaya HOM05D003933 ORTHO05D004746 3.9e-123 445.7 481 52.0
Glyma.11G100000 Glycine max HOM05D003933 ORTHO05D004746 8.6e-123 444.5 402 58.2
FAN12G2057 Fragaria x ananassa HOM05D003933 ORTHO05D004746 1.6e-121 440.3 400 55.2
Lj3g0018867 Lotus japonicus HOM05D003933 ORTHO05D004746 1.6e-121 440.3 400 56.0
CiPaw.06G061200 Carya illinoinensis HOM05D003933 ORTHO05D004746 2.1e-121 439.9 338 62.1
AL6G18670 Arabidopsis lyrata HOM05D003933 ORTHO05D004746 4.0e-120 435.6 401 56.6
Gohir.A03G165000 Gossypium hirsutum HOM05D003933 ORTHO05D004746 5.2e-120 435.3 405 56.3
Sabra05G0076300 Salix brachista HOM05D003933 ORTHO05D004746 1.2e-119 434.1 332 62.7
Lj3g0001561 Lotus japonicus HOM05D003933 ORTHO05D004746 4.4e-119 432.2 400 55.2
Medtr4g075120 Medicago truncatula HOM05D003933 ORTHO05D004746 3.7e-118 429.1 401 55.6
Gorai.005G210900 Gossypium raimondii HOM05D003933 ORTHO05D004746 3.2e-117 426.0 406 55.9
Gohir.D02G188200 Gossypium hirsutum HOM05D003933 ORTHO05D004746 5.4e-117 425.2 406 56.4
Thhalv10013838m.g Eutrema salsugineum HOM05D003933 ORTHO05D004746 2.1e-116 423.3 400 54.5
Ca_19016_v3 Cicer arietinum L. HOM05D003933 ORTHO05D004746 1.0e-115 421.0 400 53.2
arahy.Tifrunner.gnm1.ann1.3AB2AC Arachis hypogaea HOM05D003933 ORTHO05D004746 1.7e-115 420.2 398 54.8
arahy.Tifrunner.gnm1.ann1.E3G1QY Arachis hypogaea HOM05D003933 ORTHO05D004746 1.7e-115 420.2 398 54.8
Potri.005G092100 Populus trichocarpa HOM05D003933 ORTHO05D004746 6.6e-115 418.3 387 56.8
AT5G08270 Arabidopsis thaliana HOM05D003933 ORTHO05D004746 1.1e-114 417.5 400 55.0
ATR0618G423 Amborella trichopoda HOM05D003933 ORTHO05D004746 1.9e-114 416.8 403 55.3
Lalb_Chr19g0139431 Lupinus albus HOM05D003933 ORTHO05D004746 8.1e-113 411.4 404 54.2
BcaB08g37269 Brassica carinata HOM05D003933 ORTHO05D004746 1.2e-111 407.5 403 54.1
Sp6g34690 Schrenkiella parvula HOM05D003933 ORTHO05D004746 3.4e-111 406.0 384 54.2
VMungo1127G0010 Vigna mungo HOM05D003933 ORTHO05D004746 9.9e-111 404.4 391 54.0
MBI06_g23608_MAGBIO Magnolia biondii HOM05D003933 ORTHO05D004746 7.8e-108 394.8 358 55.0
Sopen12g030430 Solanum pennellii HOM05D003933 ORTHO05D004746 2.3e-107 393.3 245 74.3
HPP92_008573 Vanilla planifolia HOM05D003933 ORTHO05D004746 4.7e-105 385.6 330 60.9
Carub.0006s0715 Capsella rubella HOM05D003933 ORTHO05D004746 5.2e-104 382.1 362 53.6
MBI06_g32507_MAGBIO Magnolia biondii HOM05D003933 ORTHO05D004746 1.5e-103 380.6 311 58.2
BolC9t59613H Brassica oleracea HOM05D003933 ORTHO05D004746 1.2e-100 370.9 401 51.9
BraA10t44888Z Brassica rapa HOM05D003933 ORTHO05D004746 7.8e-100 368.2 400 51.0
C09p68670 Brassica napus HOM05D003933 ORTHO05D004746 2.3e-99 366.7 400 51.2
A10p28410 Brassica napus HOM05D003933 ORTHO05D004746 1.1e-98 364.4 398 50.8
Lj3g0003114 Lotus japonicus HOM05D003933 ORTHO05D004746 2.5e-98 363.2 357 51.8
Lj3g0021014 Lotus japonicus HOM05D003933 ORTHO05D004746 2.5e-98 363.2 357 51.8
Lj3g0017683 Lotus japonicus HOM05D003933 ORTHO05D004746 5.6e-98 362.1 357 51.5
Dinv17619 Davidia involucrata HOM05D003933 ORTHO05D004746 1.4e-96 357.5 261 67.4
TPR.G25000 Trifolium pratense HOM05D003933 ORTHO05D004746 3.1e-96 356.3 354 52.3
CSS0006186 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 6.4e-94 348.6 256 64.5
FAN17G2963 Fragaria x ananassa HOM05D003933 ORTHO05D004746 1.1e-93 347.8 272 58.5
GSVIVG01026245001 Vitis vinifera HOM05D003933 ORTHO05D004746 2.7e-92 343.2 402 49.5
Ca_20843_v3 Cicer arietinum L. HOM05D003933 ORTHO05D004746 1.1e-90 337.8 339 51.0
Zm00001eb248160 Zea mays HOM05D003933 ORTHO05D004746 2.5e-90 336.7 315 54.0
CSS0013970 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 4.3e-90 335.9 270 59.3
Psat7g177760 Pisum sativum HOM05D003933 ORTHO05D004746 1.4e-88 330.9 340 51.2
CSS0049411 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 2.4e-85 320.1 227 64.3
SEGI_04055 Sequoiadendron giganteum HOM05D003933 ORTHO05D004746 1.5e-82 310.8 379 46.2
CSS0027256 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 2.4e-80 303.5 253 56.9
CARHR204870 Cardamine hirsuta HOM05D003933 ORTHO05D004746 5.3e-80 302.4 267 57.7
SMO364G0332 Selaginella moellendorffii HOM05D003933 ORTHO05D004746 5.5e-77 292.4 379 43.3
Mapoly0072s0109 Marchantia polymorpha HOM05D003933 ORTHO05D004746 5.1e-75 285.8 398 41.5
AagrBONN_evm.TU.Sc2ySwM_117.4016 Anthoceros agrestis HOM05D003933 ORTHO05D004746 1.5e-74 284.3 410 41.2
CDE08G0738 Ceratophyllum demersum HOM05D003933 ORTHO05D004746 4.1e-72 276.2 249 55.0
Sed0007936 Sechium edule HOM05D003933 ORTHO05D004746 1.1e-69 268.1 281 51.2
PGSC0003DMG400011553 Solanum tuberosum HOM05D003933 ORTHO05D004746 3.6e-68 263.1 156 75.6
Pp3c10_5850 Physcomitrium patens HOM05D003933 ORTHO05D004746 8.7e-67 258.5 403 39.0
MD16G1003200 Malus domestica HOM05D003933 ORTHO05D004746 3.4e-63 246.5 361 41.0
Sc10g0005110 Simmondsia chinensis HOM05D003933 ORTHO05D004746 2.0e-55 220.7 189 59.3
CBR_g6576 Chara braunii HOM05D003933 ORTHO05D004746 1.4e-53 214.5 438 35.2
Oeu044350.1 Olea europaea HOM05D003933 ORTHO05D004746 5.2e-43 179.5 138 66.7
Nn7g37760 Nelumbo nucifera HOM05D003933 ORTHO05D004746 7.7e-39 165.6 126 69.8
Sc10g0005100 Simmondsia chinensis HOM05D003933 ORTHO05D004746 7.7e-39 165.6 136 67.6
SHI31071 Sapria himalayana HOM05D003933 ORTHO05D004746 5.5e-37 159.5 367 32.4
MCO06G263 Micromonas commoda HOM05D003933 ORTHO05D004746 3.7e-33 146.7 446 29.1
CDE08G1244 Ceratophyllum demersum HOM05D003933 ORTHO05D004746 2.9e-30 137.1 126 56.3
COL.COLO4_20883 Corchorus olitorius HOM05D003933 ORTHO05D004746 2.9e-30 137.1 113 55.8
C02p60970 Brassica napus HOM05D003933 ORTHO05D004746 1.7e-25 121.3 302 31.1
C06p10890 Brassica napus HOM05D003933 ORTHO05D004746 4.9e-25 119.8 302 30.8
BcaC03g18034 Brassica carinata HOM05D003933 ORTHO05D004746 1.4e-24 118.2 376 28.5
Cre02.g086076 Chlamydomonas reinhardtii HOM05D003933 ORTHO05D004746 6.6e-22 109.4 179 30.7
A02p41110 Brassica napus HOM05D003933 ORTHO05D004746 1.6e-20 104.8 67 64.2
MBI06_g42297_MAGBIO Magnolia biondii HOM05D003933 ORTHO05D004746 6.4e-17 92.8 92 53.3
PGSC0003DMG401019957 Solanum tuberosum HOM05D003933 ORTHO05D004746 3.2e-16 90.5 73 63.0
Dinv17620 Davidia involucrata HOM05D003933 ORTHO05D028341 2.7e-15 87.4 64 65.6
CARHR204860 Cardamine hirsuta HOM05D003933 ORTHO05D004746 5.9e-15 86.3 72 58.3
SEGI_32331 Sequoiadendron giganteum HOM05D003933 ORTHO05D004746 4.3e-13 80.1 103 43.7
Psat7g177720 Pisum sativum HOM05D003933 ORTHO05D004746 3.4e-10 70.5 44 79.5
BcaC03g13212 Brassica carinata HOM05D003933 ORTHO05D004746 6.4e-09 66.2 131 32.8
COL.COLO4_20881 Corchorus olitorius HOM05D003933 ORTHO05D004746 5.4e-08 63.2 43 67.4
BolC2t12147H Brassica oleracea HOM05D003933 ORTHO05D028341 3.0e-06 57.4 41 61.0


User provided reference genes

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