Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000930g0010 Nicotiana tabacum HOM05D003565 ORTHO05D003943 6.9e-67 257.3 142 100.0
Nitab4.5_0000194g0060 Nicotiana tabacum HOM05D003565 ORTHO05D003943 1.4e-35 153.3 155 64.5
Nitab4.5_0000493g0100 Nicotiana tabacum HOM05D003565 ORTHO05D003943 2.4e-35 152.5 152 63.8
Nitab4.5_0003949g0030 Nicotiana tabacum HOM05D003565 ORTHO05D003943 4.5e-34 148.3 147 66.7
Nitab4.5_0003949g0040 Nicotiana tabacum HOM05D003565 ORTHO05D003943 5.9e-34 147.9 145 66.9
Nitab4.5_0000493g0080 Nicotiana tabacum HOM05D003565 ORTHO05D003943 3.7e-28 128.6 140 58.6
Nitab4.5_0000194g0050 Nicotiana tabacum HOM05D003565 ORTHO05D003943 4.5e-26 121.7 145 57.2
Nitab4.5_0000493g0090 Nicotiana tabacum HOM05D003565 ORTHO05D003943 3.6e-23 112.1 146 53.4
Solyc01g066680.3 Solanum lycopersicum HOM05D003565 ORTHO05D003943 8.0e-23 110.9 140 51.4
PGSC0003DMG400011334 Solanum tuberosum HOM05D003565 ORTHO05D003943 1.4e-22 110.2 144 50.7
CAN.G261.3 Capsicum annuum HOM05D003565 ORTHO05D003943 5.2e-22 108.2 156 50.0
Sopen01g028300 Solanum pennellii HOM05D003565 ORTHO05D003943 8.8e-22 107.5 158 46.8
Peaxi162Scf00246g01219 Petunia axillaris HOM05D003565 ORTHO05D003943 1.2e-21 107.1 162 50.0
Nitab4.5_0000513g0180 Nicotiana tabacum HOM05D003565 ORTHO05D003943 9.8e-21 104.0 163 48.5
Nitab4.5_0005362g0030 Nicotiana tabacum HOM05D003565 ORTHO05D003943 1.2e-18 97.1 151 51.0
CiPaw.02G081300 Carya illinoinensis HOM05D003565 ORTHO05D003943 8.0e-15 84.3 154 40.9
Dinv29764 Davidia involucrata HOM05D003565 ORTHO05D003943 6.8e-14 81.3 161 42.2
Cfa015405 Carpinus fangiana HOM05D003565 ORTHO05D003943 2.6e-13 79.3 155 41.9
Nitab4.5_0000194g0080 Nicotiana tabacum HOM05D003565 ORTHO05D003943 9.8e-13 77.4 65 69.2
Hma1.2p1_1807F.1_g303350 Hydrangea macrophylla HOM05D003565 ORTHO05D003943 1.7e-12 76.6 154 41.6
SalBow2G0621 Salvia bowleyana HOM05D003565 ORTHO05D003943 4.9e-12 75.1 146 40.4
Migut.O00777 Erythranthe guttata HOM05D003565 ORTHO05D003943 1.4e-11 73.6 152 38.2
Gorai.011G191400 Gossypium raimondii HOM05D003565 ORTHO05D003943 1.4e-11 73.6 155 40.0
Gohir.D10G171300 Gossypium hirsutum HOM05D003565 ORTHO05D003943 1.8e-11 73.2 155 39.4
MSTRG.10106 Avicennia marina HOM05D003565 ORTHO05D003943 2.4e-11 72.8 154 40.3
Gohir.A10G165200 Gossypium hirsutum HOM05D003565 ORTHO05D003943 2.4e-11 72.8 155 38.1
Thecc.04G287000 Theobroma cacao HOM05D003565 ORTHO05D003943 3.1e-11 72.4 152 40.1
Cpa.g.sc16.191 Carica papaya HOM05D003565 ORTHO05D003943 5.4e-11 71.6 150 39.3
COL.COLO4_13836 Corchorus olitorius HOM05D003565 ORTHO05D003943 5.4e-11 71.6 162 40.1
Duzib151G1023 Durio zibethinus HOM05D003565 ORTHO05D003943 7.0e-11 71.2 151 40.4
ECA240G0767 Erigeron canadensis HOM05D003565 ORTHO05D003943 9.2e-11 70.9 147 42.9
SGA_v2.0_scaffold18G08345 Striga asiatica HOM05D003565 ORTHO05D003943 1.2e-10 70.5 167 36.5
THA.LOC104820292 Tarenaya hassleriana HOM05D003565 ORTHO05D003943 1.2e-10 70.5 124 45.2
Actinidia28386 Actinidia chinensis HOM05D003565 ORTHO05D003943 1.6e-10 70.1 143 37.8
GSVIVG01035140001 Vitis vinifera HOM05D003565 ORTHO05D003943 1.6e-10 70.1 137 42.3
CiPaw.02G081400 Carya illinoinensis HOM05D003565 ORTHO05D003943 5.9e-10 68.2 157 38.2
CiPaw.02G081500 Carya illinoinensis HOM05D003565 ORTHO05D003943 5.9e-10 68.2 157 38.2
PGR004G2879 Punica granatum HOM05D003565 ORTHO05D003943 5.9e-10 68.2 118 43.2
Sabra10G0007900 Salix brachista HOM05D003565 ORTHO05D003943 5.9e-10 68.2 147 37.4
Haze_01182 Corylus avellana HOM05D003565 ORTHO05D003943 7.8e-10 67.8 139 41.7
Nitab4.5_0000194g0070 Nicotiana tabacum HOM05D003565 ORTHO05D003943 7.8e-10 67.8 65 63.1
Oeu064291.1 Olea europaea HOM05D003565 ORTHO05D003943 7.8e-10 67.8 158 38.0
BcaC09g48620 Brassica carinata HOM05D003565 ORTHO05D003943 1.0e-09 67.4 113 43.4
AL3G29580 Arabidopsis lyrata HOM05D003565 ORTHO05D003943 1.3e-09 67.0 119 38.7
PGR004G0277 Punica granatum HOM05D003565 ORTHO05D003943 1.3e-09 67.0 118 42.4
PGR004G2171 Punica granatum HOM05D003565 ORTHO05D003943 1.3e-09 67.0 118 42.4
Carub.0003s1639 Capsella rubella HOM05D003565 ORTHO05D003943 1.7e-09 66.6 121 39.7
SalBow2G2654 Salvia bowleyana HOM05D003565 ORTHO05D003943 2.3e-09 66.2 161 34.8
vmacro15222 Vaccinium macrocarpon HOM05D003565 ORTHO05D003943 2.9e-09 65.9 142 39.4
Potri.010G012400 Populus trichocarpa HOM05D003565 ORTHO05D003943 5.0e-09 65.1 146 36.3
CsaV3_3G014750 Cucumis sativus L. HOM05D003565 ORTHO05D003943 8.6e-09 64.3 155 36.1
AT3G16660 Arabidopsis thaliana HOM05D003565 ORTHO05D003943 1.5e-08 63.5 116 37.9
Actinidia14291 Actinidia chinensis HOM05D003565 ORTHO05D003943 1.9e-08 63.2 148 36.5
CANSAT78G1552 Cannabis sativa HOM05D003565 ORTHO05D003943 2.5e-08 62.8 129 38.0
PGR004G2038 Punica granatum HOM05D003565 ORTHO05D003943 2.5e-08 62.8 101 41.6
CARHR091910 Cardamine hirsuta HOM05D003565 ORTHO05D003943 3.3e-08 62.4 120 37.5
Cfa015408 Carpinus fangiana HOM05D003565 ORTHO05D003943 3.3e-08 62.4 158 39.9
HanXRQChr13g0420001 Helianthus annuus HOM05D003565 ORTHO05D003943 3.3e-08 62.4 141 36.9
Prupe.1G133700 Prunus persica HOM05D003565 ORTHO05D003943 3.3e-08 62.4 157 35.0
Cfa021269 Carpinus fangiana HOM05D003565 ORTHO05D003943 4.3e-08 62.0 158 36.7
ClCG05G006170 Citrullus lanatus HOM05D003565 ORTHO05D003943 4.3e-08 62.0 141 34.8
MELO3C006673.2 Cucumis melo HOM05D003565 ORTHO05D003943 4.3e-08 62.0 134 32.8
Thhalv10021522m.g Eutrema salsugineum HOM05D003565 ORTHO05D003943 4.3e-08 62.0 109 36.7
Rhsim02G0008000 Rhododendron simsii HOM05D003565 ORTHO05D003943 5.6e-08 61.6 143 37.1
Aa31LG8G3780 Aethionema arabicum HOM05D003565 ORTHO05D003943 7.3e-08 61.2 118 39.8
FAN12G0358 Fragaria x ananassa HOM05D003565 ORTHO05D003943 7.3e-08 61.2 160 35.0
FAN12G1574 Fragaria x ananassa HOM05D003565 ORTHO05D003943 7.3e-08 61.2 160 35.0
FvH4_4g18480 Fragaria vesca HOM05D003565 ORTHO05D003943 9.5e-08 60.8 160 35.0
Oeu026321.1 Olea europaea HOM05D003565 ORTHO05D003943 9.5e-08 60.8 153 35.3
PSO210G5566 Papaver somniferum HOM05D003565 ORTHO05D003943 9.5e-08 60.8 149 37.6
Sed0004032 Sechium edule HOM05D003565 ORTHO05D003943 9.5e-08 60.8 147 36.1
Cc03_g01690 Coffea canephora HOM05D003565 ORTHO05D003943 1.2e-07 60.5 152 36.8
FAN17G2113 Fragaria x ananassa HOM05D003565 ORTHO05D003943 1.2e-07 60.5 159 34.0
PSO832G2395 Papaver somniferum HOM05D003565 ORTHO05D003943 1.2e-07 60.5 149 37.6
Glyma.09G043500 Glycine max HOM05D003565 ORTHO05D003943 2.1e-07 59.7 153 39.9
HanXRQChr03g0088811 Helianthus annuus HOM05D003565 ORTHO05D003943 2.1e-07 59.7 151 34.4
HanXRQChr03g0089351 Helianthus annuus HOM05D003565 ORTHO05D003943 2.8e-07 59.3 133 38.3
HanXRQChr08g0214541 Helianthus annuus HOM05D003565 ORTHO05D003943 2.8e-07 59.3 128 39.8
Lsat_1_v5_gn_6_95321 Lactuca sativa HOM05D003565 ORTHO05D003943 2.8e-07 59.3 128 38.3
MBI18_g24867_MAGBIO Magnolia biondii HOM05D003565 ORTHO05D003943 2.8e-07 59.3 154 36.4
CSS0017850 Camellia sinensis var. sinensis HOM05D003565 ORTHO05D003943 3.6e-07 58.9 153 39.2
DCAR_027062 Daucus carota HOM05D003565 ORTHO05D003943 3.6e-07 58.9 152 34.2
DCAR_027064 Daucus carota HOM05D003565 ORTHO05D003943 3.6e-07 58.9 152 34.2
RcHm_v2.0_Chr4g0422991 Rosa chinensis HOM05D003565 ORTHO05D003943 4.7e-07 58.5 160 34.4
Lalb_Chr15g0083411 Lupinus albus HOM05D003565 ORTHO05D003943 1.0e-06 57.4 151 37.7
Lj6g0014140 Lotus japonicus HOM05D003565 ORTHO05D003943 1.4e-06 57.0 145 38.6
Medtr2g436350 Medicago truncatula HOM05D003565 ORTHO05D003943 1.4e-06 57.0 145 33.1
A01p37210 Brassica napus HOM05D003565 ORTHO05D003943 1.8e-06 56.6 117 33.3
CSS0008161 Camellia sinensis var. sinensis HOM05D003565 ORTHO05D003943 1.8e-06 56.6 161 36.6
Carub.0002s1293 Capsella rubella HOM05D003565 ORTHO05D003943 1.8e-06 56.6 144 36.8
HanXRQChr01g0002181 Helianthus annuus HOM05D003565 ORTHO05D003943 3.0e-06 55.8 97 41.2
Phvul.009G249400 Phaseolus vulgaris HOM05D003565 ORTHO05D003943 3.0e-06 55.8 150 38.7
Sed0026730 Sechium edule HOM05D003565 ORTHO05D003943 3.0e-06 55.8 124 34.7
DCAR_027061 Daucus carota HOM05D003565 ORTHO05D003943 4.0e-06 55.5 95 40.0
QL06p009725 Quercus lobata HOM05D003565 ORTHO05D003943 4.0e-06 55.5 83 45.8
Psat1g155160 Pisum sativum HOM05D003565 ORTHO05D003943 5.2e-06 55.1 143 36.4
Carub.0003s1640 Capsella rubella HOM05D003565 ORTHO05D003943 6.8e-06 54.7 147 37.4


User provided reference genes

Program Settings