Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000928g0050 Nicotiana tabacum HOM05D002744 ORTHO05D008989 9.8e-101 370.2 190 100.0
Sopen02g021690 Solanum pennellii HOM05D002744 ORTHO05D008989 1.0e-86 323.6 192 87.5
Peaxi162Scf00284g00123 Petunia axillaris HOM05D002744 ORTHO05D008989 8.9e-86 320.5 192 87.5
Nitab4.5_0000263g0100 Nicotiana tabacum HOM05D002744 ORTHO05D008989 1.3e-81 306.6 160 98.8
Dinv21809 Davidia involucrata HOM05D002744 ORTHO05D008989 1.6e-71 273.1 188 74.5
Duzib114G0765 Durio zibethinus HOM05D002744 ORTHO05D008989 5.2e-70 268.1 193 71.0
Thecc.10G007100 Theobroma cacao HOM05D002744 ORTHO05D008989 6.8e-70 267.7 191 71.2
Gohir.D04G071200 Gossypium hirsutum HOM05D002744 ORTHO05D008989 1.5e-69 266.5 191 70.7
Sed0024728 Sechium edule HOM05D002744 ORTHO05D008989 2.0e-69 266.2 191 73.3
GSVIVG01032723001 Vitis vinifera HOM05D002744 ORTHO05D008989 2.0e-69 266.2 191 72.3
Ciclev10032836m.g Citrus clementina HOM05D002744 ORTHO05D008989 4.4e-69 265.0 191 71.2
CiPaw.02G197300 Carya illinoinensis HOM05D002744 ORTHO05D008989 1.3e-68 263.5 192 71.9
Haze_17321 Corylus avellana HOM05D002744 ORTHO05D008989 1.7e-68 263.1 192 71.9
Gohir.A05G332500 Gossypium hirsutum HOM05D002744 ORTHO05D008989 1.7e-68 263.1 193 69.4
CsaV3_5G010720 Cucumis sativus L. HOM05D002744 ORTHO05D008989 2.9e-68 262.3 193 72.0
Actinidia00986 Actinidia chinensis HOM05D002744 ORTHO05D008989 3.2e-67 258.8 192 71.4
Cc02_g05720 Coffea canephora HOM05D002744 ORTHO05D008989 4.1e-67 258.5 187 72.2
Eucgr.G03110 Eucalyptus grandis HOM05D002744 ORTHO05D008989 4.1e-67 258.5 191 71.7
QL08p064284 Quercus lobata HOM05D002744 ORTHO05D008989 2.7e-66 255.8 191 70.2
HanXRQChr17g0560791 Helianthus annuus HOM05D002744 ORTHO05D008989 3.5e-66 255.4 191 65.4
Gorai.012G080100 Gossypium raimondii HOM05D002744 ORTHO05D008989 7.8e-66 254.2 203 66.0
COL.COLO4_25825 Corchorus olitorius HOM05D002744 ORTHO05D006546 3.9e-65 251.9 182 69.8
Rhsim09G0182800 Rhododendron simsii HOM05D002744 ORTHO05D008989 6.6e-65 251.1 188 68.1
PGR142G3983 Punica granatum HOM05D002744 ORTHO05D008989 4.3e-64 248.4 187 68.4
CANSAT56G2966 Cannabis sativa HOM05D002744 ORTHO05D008989 2.8e-63 245.7 192 66.1
Nn2g11068 Nelumbo nucifera HOM05D002744 ORTHO05D008989 2.8e-63 245.7 185 68.6
arahy.Tifrunner.gnm1.ann1.HIE7A8 Arachis hypogaea HOM05D002744 ORTHO05D008989 3.6e-63 245.4 192 67.2
MD01G1161400 Malus domestica HOM05D002744 ORTHO05D008989 4.7e-63 245.0 191 68.1
Migut.A01076 Erythranthe guttata HOM05D002744 ORTHO05D008989 1.4e-62 243.4 189 66.1
TWI38G2197 Tripterygium wilfordii HOM05D002744 ORTHO05D008989 1.8e-62 243.0 187 66.3
Glyma.18G022300 Glycine max HOM05D002744 ORTHO05D008989 3.1e-62 242.3 192 68.2
MD07G1229300 Malus domestica HOM05D002744 ORTHO05D008989 3.1e-62 242.3 191 67.0
Hma1.2p1_1240F.1_g269640 Hydrangea macrophylla HOM05D002744 ORTHO05D008989 4.0e-62 241.9 159 74.8
arahy.Tifrunner.gnm1.ann1.B5C26Y Arachis hypogaea HOM05D002744 ORTHO05D008989 5.2e-62 241.5 191 67.0
arahy.Tifrunner.gnm1.ann1.N80L0Z Arachis hypogaea HOM05D002744 ORTHO05D008989 8.9e-62 240.7 186 67.7
RcHm_v2.0_Chr1g0371481 Rosa chinensis HOM05D002744 ORTHO05D008989 8.9e-62 240.7 191 66.0
vmacro09984 Vaccinium macrocarpon HOM05D002744 ORTHO05D008989 8.9e-62 240.7 220 59.5
Manes.10G008400 Manihot esculenta HOM05D002744 ORTHO05D008989 2.6e-61 239.2 187 66.3
AUR62022976 Chenopodium quinoa HOM05D002744 ORTHO05D008989 3.4e-61 238.8 185 64.9
Hund13513 Selenicereus undatus HOM05D002744 ORTHO05D008989 4.4e-61 238.4 188 66.0
Glyma.11G234700 Glycine max HOM05D002744 ORTHO05D008989 5.8e-61 238.0 188 68.1
FAN03G1008 Fragaria x ananassa HOM05D002744 ORTHO05D006546 7.6e-61 237.7 192 65.6
MSTRG.12212 Avicennia marina HOM05D002744 ORTHO05D008989 9.9e-61 237.3 182 68.1
ECA233G4001 Erigeron canadensis HOM05D002744 ORTHO05D008989 9.9e-61 237.3 195 63.1
THA.LOC104824346 Tarenaya hassleriana HOM05D002744 ORTHO05D008989 9.9e-61 237.3 183 67.2
Phvul.001G248100 Phaseolus vulgaris HOM05D002744 ORTHO05D008989 1.7e-60 236.5 192 65.1
EL10Ac2g04293 Beta vulgaris HOM05D002744 ORTHO05D008989 2.2e-60 236.1 192 61.5
FvH4_7g25501 Fragaria vesca HOM05D002744 ORTHO05D008989 2.9e-60 235.7 192 64.6
FAN10G0428 Fragaria x ananassa HOM05D002744 ORTHO05D006546 3.8e-60 235.3 192 64.6
Atru.BG.256.p Acer truncatum HOM05D002744 ORTHO05D008989 4.9e-60 235.0 153 79.7
Cpa.g.sc19.99 Carica papaya HOM05D002744 ORTHO05D008989 4.9e-60 235.0 183 67.2
FAN06G0491 Fragaria x ananassa HOM05D002744 ORTHO05D006546 6.4e-60 234.6 192 64.1
Thhalv10006252m.g Eutrema salsugineum HOM05D002744 ORTHO05D008989 1.1e-59 233.8 183 63.4
SalBow3G4547 Salvia bowleyana HOM05D002744 ORTHO05D008989 2.4e-59 232.6 183 65.0
Potri.008G075600 Populus trichocarpa HOM05D002744 ORTHO05D008989 1.6e-58 229.9 188 63.8
CSS0017108 Camellia sinensis var. sinensis HOM05D002744 ORTHO05D006546 2.1e-58 229.6 160 71.9
Lju41C22T0 Lonicera japonica HOM05D002744 ORTHO05D008989 4.6e-58 228.4 159 73.6
BcaB08g34630 Brassica carinata HOM05D002744 ORTHO05D008989 6.0e-58 228.0 183 62.8
Lj8C58T1 Lonicera japonica HOM05D002744 ORTHO05D008989 6.0e-58 228.0 159 73.6
Sp5g06290 Schrenkiella parvula HOM05D002744 ORTHO05D008989 6.0e-58 228.0 183 62.8
Lj6g0011522 Lotus japonicus HOM05D002744 ORTHO05D008989 7.8e-58 227.6 194 62.4
AUR62012334 Chenopodium quinoa HOM05D002744 ORTHO05D008989 2.3e-57 226.1 153 69.9
Carub.0005s2299 Capsella rubella HOM05D002744 ORTHO05D008989 3.9e-57 225.3 184 61.4
Sabra08G0056200 Salix brachista HOM05D002744 ORTHO05D008989 6.6e-57 224.6 188 62.8
Ca_15179_v3 Cicer arietinum L. HOM05D002744 ORTHO05D008989 8.7e-57 224.2 192 61.5
AL5G37530 Arabidopsis lyrata HOM05D002744 ORTHO05D008989 1.9e-56 223.0 184 61.4
DCAR_011891 Daucus carota HOM05D002744 ORTHO05D008989 1.9e-56 223.0 156 71.2
TPR.G28641 Trifolium pratense HOM05D002744 ORTHO05D008989 2.5e-56 222.6 192 61.5
SGA_v2.0_scaffold36G14267 Striga asiatica HOM05D002744 ORTHO05D008989 3.3e-56 222.2 181 65.7
unitig_32.g11706 Utricularia gibba HOM05D002744 ORTHO05D008989 3.3e-56 222.2 180 60.6
unitig_33.g30211 Utricularia gibba HOM05D002744 ORTHO05D008989 3.3e-56 222.2 180 60.6
Medtr3g072120 Medicago truncatula HOM05D002744 ORTHO05D008989 4.3e-56 221.9 193 61.1
AT3G56210 Arabidopsis thaliana HOM05D002744 ORTHO05D008989 7.3e-56 221.1 182 61.5
PSO017G6389 Papaver somniferum HOM05D002744 ORTHO05D008989 1.3e-55 220.3 191 60.2
Lalb_Chr08g0231351 Lupinus albus HOM05D002744 ORTHO05D008989 1.6e-55 219.9 189 62.4
VMungo1383G3724 Vigna mungo HOM05D002744 ORTHO05D008989 8.1e-55 217.6 160 69.4
CARHR166360 Cardamine hirsuta HOM05D002744 ORTHO05D008989 1.1e-54 217.2 167 63.5
A09p49190 Brassica napus HOM05D002744 ORTHO05D008989 1.8e-54 216.5 184 60.3
PSO170G0776 Papaver somniferum HOM05D002744 ORTHO05D008989 1.8e-54 216.5 191 59.2
BraA09t40372Z Brassica rapa HOM05D002744 ORTHO05D008989 2.4e-54 216.1 192 58.9
PGSC0003DMG400010239 Solanum tuberosum HOM05D002744 ORTHO05D008989 2.4e-54 216.1 125 91.2
Solyc02g076790.4 Solanum lycopersicum HOM05D002744 ORTHO05D008989 6.9e-54 214.5 125 90.4
FAN01G1994 Fragaria x ananassa HOM05D002744 ORTHO05D006546 2.0e-53 213.0 214 55.6
Oeu026180.1 Olea europaea HOM05D002744 ORTHO05D008989 2.6e-53 212.6 137 78.1
Os03g0665800 Oryza sativa ssp. japonica HOM05D002744 ORTHO05D008989 2.6e-53 212.6 153 68.0
Lsat_1_v5_gn_8_13401 Lactuca sativa HOM05D002744 ORTHO05D008989 3.8e-52 208.8 152 68.4
Hma1.2p1_1240F.1_g269630 Hydrangea macrophylla HOM05D002744 ORTHO05D008989 2.4e-51 206.1 135 76.3
HPP92_013966 Vanilla planifolia HOM05D002744 ORTHO05D008989 3.2e-51 205.7 173 61.8
ATR0681G046 Amborella trichopoda HOM05D000826 ORTHO05D008989 9.6e-48 194.1 171 56.7
TAR369G0133 Trochodendron aralioides HOM05D000826 ORTHO05D001831 1.6e-47 193.4 149 65.1
ClCG07G004800 Citrullus lanatus HOM05D002744 ORTHO05D008989 1.1e-46 190.7 193 58.5
CDE02G4284 Ceratophyllum demersum HOM05D002744 ORTHO05D008989 3.1e-46 189.1 132 68.2
Lj1A963T49 Lonicera japonica HOM05D002744 ORTHO05D008989 5.3e-46 188.3 111 82.0
BcaB01g00016 Brassica carinata HOM05D002744 ORTHO05D008989 6.9e-46 188.0 152 63.8
EL10Ac2g04295 Beta vulgaris HOM05D002744 ORTHO05D008989 2.6e-45 186.0 155 60.6
Prupe.2G259500 Prunus persica HOM05D002744 ORTHO05D008989 1.3e-44 183.7 126 74.6
BcaC07g39936 Brassica carinata HOM05D002744 ORTHO05D008989 2.9e-44 182.6 145 63.4
C08p31530 Brassica napus HOM05D002744 ORTHO05D008989 2.9e-44 182.6 142 64.8
Zm00001eb065520 Zea mays HOM05D002744 ORTHO05D008989 3.2e-43 179.1 111 75.7
MELO3C020107.2 Cucumis melo HOM05D002744 ORTHO05D008989 2.7e-42 176.0 193 52.8
SEGI_09795 Sequoiadendron giganteum HOM05D002744 ORTHO05D008989 2.7e-42 176.0 185 50.8
BolC8t50775H Brassica oleracea HOM05D002744 ORTHO05D008989 4.3e-40 168.7 183 49.7
BcaB01g00017 Brassica carinata HOM05D002744 ORTHO05D008989 1.6e-39 166.8 167 54.5
TAR623G0678 Trochodendron aralioides HOM05D002744 ORTHO05D008989 5.3e-38 161.8 122 70.5
Aa31LG10G11120 Aethionema arabicum HOM05D002744 ORTHO05D008989 5.8e-37 158.3 117 67.5
Gohir.A10G240750 Gossypium hirsutum HOM05D002744 ORTHO05D008989 4.9e-36 155.2 124 64.5
SEGI_38813 Sequoiadendron giganteum HOM05D002744 ORTHO05D008989 1.1e-30 137.5 107 60.7
Mapoly0001s0439 Marchantia polymorpha HOM05D002744 ORTHO05D008989 2.4e-30 136.3 163 47.2
Hma1.2p1_0322F.1_g124790 Hydrangea macrophylla HOM05D002744 ORTHO05D008989 1.5e-29 133.7 153 49.7
Psat5g130160 Pisum sativum HOM05D002744 ORTHO05D008989 2.5e-27 126.3 102 65.7
Sc10g0002800 Simmondsia chinensis HOM05D002744 ORTHO05D008989 1.8e-25 120.2 131 52.7
CDE01G0559 Ceratophyllum demersum HOM05D002744 ORTHO05D008989 1.5e-24 117.1 141 46.8
Pp3c8_1670 Physcomitrium patens HOM05D002744 ORTHO05D008989 1.6e-18 97.1 98 49.0
SMO147G0318 Selaginella moellendorffii HOM05D002744 ORTHO05D008989 1.1e-14 84.3 172 32.6
CAN.G118.19 Capsicum annuum HOM05D002744 ORTHO05D008989 5.3e-14 82.0 50 84.0
Solyc06g050837.1 Solanum lycopersicum HOM05D002744 ORTHO05D008989 9.4e-11 71.2 48 72.9
Psat5g125520 Pisum sativum HOM05D002744 ORTHO05D008989 1.1e-08 64.3 61 55.7
C06p23580 Brassica napus HOM05D002744 ORTHO05D008989 4.4e-08 62.4 49 55.1


User provided reference genes

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