Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000926g0050 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.2e-77 291.6 138 100.0
Nitab4.5_0002540g0110 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.2e-68 263.1 144 88.2
Nitab4.5_0000775g0180 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.6e-47 193.0 93 95.7
Nitab4.5_0000643g0040 Nicotiana tabacum HOM05D004926 ORTHO05D006375 5.9e-47 191.0 93 94.6
Nitab4.5_0001832g0060 Nicotiana tabacum HOM05D004926 ORTHO05D006375 8.5e-46 187.2 91 94.5
Nitab4.5_0000396g0210 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.2e-45 184.9 91 93.4
Nitab4.5_0005138g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.2e-44 183.3 91 92.3
Nitab4.5_0016905g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.1e-44 182.6 93 90.3
Nitab4.5_0000902g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.7e-44 182.2 137 67.9
Nitab4.5_0000587g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 6.1e-44 181.0 91 89.0
Nitab4.5_0028204g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.0e-43 178.7 91 90.1
Nitab4.5_0000073g0430 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.2e-42 176.8 91 89.0
Nitab4.5_0000199g0080 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.6e-42 175.6 91 89.0
Nitab4.5_0004532g0050 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.4e-42 175.3 91 89.0
Nitab4.5_0000324g0260 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.8e-41 172.2 91 86.8
Nitab4.5_0003273g0050 Nicotiana tabacum HOM05D004926 ORTHO05D001422 2.8e-41 172.2 107 77.6
Nitab4.5_0001338g0120 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.8e-40 169.5 91 85.7
Nitab4.5_0003972g0050 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.4e-40 169.1 91 85.7
Nitab4.5_0000053g0110 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.1e-40 168.7 91 89.0
Nitab4.5_0004364g0070 Nicotiana tabacum HOM05D004926 ORTHO05D006375 5.4e-40 167.9 137 63.5
Nitab4.5_0001392g0080 Nicotiana tabacum HOM05D004926 ORTHO05D006375 9.1e-40 167.2 86 88.4
Nitab4.5_0003555g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.2e-39 166.8 91 84.6
Nitab4.5_0000157g0050 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.6e-39 166.4 91 87.9
Nitab4.5_0000462g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.0e-39 166.0 91 87.9
Nitab4.5_0000046g0100 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.7e-39 165.6 86 88.4
Nitab4.5_0000599g0040 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.5e-39 165.2 93 83.9
Nitab4.5_0009741g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.0e-38 163.7 91 84.6
Nitab4.5_0009292g0040 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.2e-38 162.5 108 73.1
Nitab4.5_0004122g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.1e-37 160.2 120 67.5
Nitab4.5_0012379g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.2e-37 158.3 91 83.5
Nitab4.5_0000332g0090 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.7e-36 154.8 144 60.4
Nitab4.5_0001843g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.7e-36 154.8 91 82.4
Nitab4.5_0000372g0080 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.4e-35 153.3 91 82.4
Nitab4.5_0000524g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.8e-32 142.9 71 90.1
Nitab4.5_0002542g0080 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.0e-31 139.4 71 88.7
Nitab4.5_0000308g0170 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.9e-29 132.9 69 91.3
Nitab4.5_0000248g0110 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.7e-28 128.3 71 80.3
Nitab4.5_0000109g0590 Nicotiana tabacum HOM05D004926 ORTHO05D006375 6.8e-27 124.4 89 60.7
Nitab4.5_0010681g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.3e-25 120.2 91 67.0
Sopen03g009300 Solanum pennellii HOM05D004926 ORTHO05D013907 6.3e-25 117.9 114 49.1
Nitab4.5_0001634g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.7e-23 112.5 91 65.9
Sopen01g029360 Solanum pennellii HOM05D000047 ORTHO05D000589 2.7e-23 112.5 91 54.9
Nitab4.5_0001299g0120 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.6e-23 111.7 52 96.2
Sopen03g019140 Solanum pennellii HOM05D000047 ORTHO05D000044 4.6e-23 111.7 91 57.1
Nitab4.5_0000754g0320 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.3e-22 110.2 52 96.2
Sopen10g027680 Solanum pennellii HOM05D004926 ORTHO05D013907 1.7e-22 109.8 91 56.0
Nitab4.5_0007526g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 5.0e-22 108.2 77 68.8
Nitab4.5_0000017g0210 Nicotiana tabacum HOM05D004926 ORTHO05D001422 6.6e-22 107.8 62 80.6
Nitab4.5_0002765g0070 Nicotiana tabacum HOM05D004926 ORTHO05D006375 8.6e-22 107.5 90 67.8
Sopen01g011940 Solanum pennellii HOM05D000047 ORTHO05D013907 2.5e-21 105.9 86 54.7
Nitab4.5_0000326g0140 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.1e-20 102.8 52 90.4
Nitab4.5_0007680g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.0e-18 96.3 52 86.5
Nitab4.5_0001574g0110 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.9e-17 92.4 63 71.4
Nitab4.5_0004541g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.9e-17 92.4 46 89.1
Nitab4.5_0002045g0120 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.9e-16 89.7 45 88.9
Nitab4.5_0005446g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 5.4e-16 88.2 52 78.8
Nitab4.5_0000035g0160 Nicotiana tabacum HOM05D004926 ORTHO05D006375 7.0e-16 87.8 45 86.7
Nitab4.5_0000271g0140 Nicotiana tabacum HOM05D004926 ORTHO05D006375 7.0e-16 87.8 45 86.7
Sopen04g011230 Solanum pennellii HOM05D000014 ORTHO05D000589 7.0e-16 87.8 82 48.8
Nitab4.5_0001228g0040 Nicotiana tabacum HOM05D004926 ORTHO05D006375 9.2e-16 87.4 45 84.4
Nitab4.5_0001843g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.6e-15 86.7 44 86.4
Nitab4.5_0005729g0090 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.6e-15 85.1 38 97.4
CAN.G1452.1 Capsicum annuum HOM05D008695 ORTHO05D006375 7.8e-15 84.3 90 46.7
Nitab4.5_0009292g0060 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.0e-14 84.0 91 52.7
Nitab4.5_0011685g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.7e-14 83.2 45 82.2
Nitab4.5_0000593g0250 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.3e-14 82.8 45 82.2
Nitab4.5_0002470g0050 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.0e-14 82.4 45 82.2
Sopen11g014810 Solanum pennellii HOM05D008695 ORTHO05D001422 3.0e-14 82.4 83 49.4
Nitab4.5_0003000g0090 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.9e-14 82.0 45 80.0
Sopen04g023930 Solanum pennellii HOM05D004926 ORTHO05D013907 6.6e-14 81.3 65 56.9
Sopen10g022130 Solanum pennellii HOM05D000047 ORTHO05D000589 6.6e-14 81.3 91 46.2
Nitab4.5_0015285g0010 Nicotiana tabacum HOM05D008440 ORTHO05D006375 8.6e-14 80.9 93 41.9
Nitab4.5_0000068g0110 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.5e-13 80.1 45 80.0
Nitab4.5_0000068g0500 Nicotiana tabacum HOM05D004926 ORTHO05D283769 1.5e-13 80.1 41 90.2
Nitab4.5_0001339g0180 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.5e-13 80.1 44 79.5
Nitab4.5_0000324g0060 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.9e-13 79.7 46 78.3
Sopen12g014880 Solanum pennellii HOM05D000047 ORTHO05D000589 1.9e-13 79.7 90 44.4
Nitab4.5_0025657g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.5e-13 79.3 45 80.0
Nitab4.5_0000606g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.3e-13 79.0 56 71.4
Nitab4.5_0008949g0010 Nicotiana tabacum HOM05D008440 ORTHO05D006375 3.3e-13 79.0 90 43.3
Nitab4.5_0001124g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.3e-13 78.6 45 77.8
Sopen01g010260 Solanum pennellii HOM05D000047 ORTHO05D000044 4.3e-13 78.6 83 47.0
Sopen09g011950 Solanum pennellii HOM05D000047 ORTHO05D000044 4.3e-13 78.6 83 47.0
Nitab4.5_0002664g0100 Nicotiana tabacum HOM05D004926 ORTHO05D006375 5.6e-13 78.2 45 80.0
Nitab4.5_0003806g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 5.6e-13 78.2 42 85.7
Nitab4.5_0022418g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 7.3e-13 77.8 45 80.0
Sopen01g015000 Solanum pennellii HOM05D008695 ORTHO05D001422 7.3e-13 77.8 83 47.0
Sopen07g009220 Solanum pennellii HOM05D008695 ORTHO05D001422 7.3e-13 77.8 83 47.0
Sopen10g008400 Solanum pennellii HOM05D000047 ORTHO05D000044 7.3e-13 77.8 83 47.0
Sopen12g021750 Solanum pennellii HOM05D000047 ORTHO05D000044 7.3e-13 77.8 83 48.2
Nitab4.5_0020898g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.2e-12 77.0 38 86.8
Sopen01g013960 Solanum pennellii HOM05D008695 ORTHO05D001422 1.2e-12 77.0 83 47.0
Sopen03g011960 Solanum pennellii HOM05D008695 ORTHO05D001422 1.2e-12 77.0 83 47.0
Sopen05g021760 Solanum pennellii HOM05D008695 ORTHO05D001422 1.6e-12 76.6 83 47.0
Sopen07g013820 Solanum pennellii HOM05D000047 ORTHO05D001422 1.6e-12 76.6 127 34.6
Nitab4.5_0002740g0060 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.1e-12 76.3 44 79.5
Nitab4.5_0026708g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.1e-12 76.3 51 60.8
Sopen06g011080 Solanum pennellii HOM05D008695 ORTHO05D001422 2.8e-12 75.9 83 45.8
Sopen02g008890 Solanum pennellii HOM05D008695 ORTHO05D001422 3.6e-12 75.5 83 47.0
Nitab4.5_0003692g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.7e-12 75.1 38 86.8
Sopen06g005030 Solanum pennellii HOM05D008695 ORTHO05D001422 6.2e-12 74.7 83 45.8
Sopen05g011410 Solanum pennellii HOM05D004926 ORTHO05D013907 8.1e-12 74.3 85 43.5
Sopen12g016880 Solanum pennellii HOM05D000047 ORTHO05D000589 1.4e-11 73.6 61 57.4
Nitab4.5_0001843g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.8e-11 73.2 36 86.1
Sopen11g013600 Solanum pennellii HOM05D008695 ORTHO05D001422 1.8e-11 73.2 83 45.8
Nitab4.5_0001685g0120 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.3e-11 72.8 41 80.5
Nitab4.5_0013196g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 8.9e-11 70.9 38 84.2
Nitab4.5_0026237g0010 Nicotiana tabacum HOM05D008440 ORTHO05D001422 2.6e-10 69.3 81 38.3
Nitab4.5_0005441g0080 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.4e-10 68.6 42 78.6
Nitab4.5_0005662g0050 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.4e-10 68.6 36 83.3
Sopen01g011600 Solanum pennellii HOM05D008695 ORTHO05D001422 5.8e-10 68.2 90 40.0
Sopen01g018140 Solanum pennellii HOM05D008695 ORTHO05D001422 7.5e-10 67.8 90 37.8
Sopen03g015690 Solanum pennellii HOM05D008695 ORTHO05D001422 9.8e-10 67.4 90 38.9
Sopen01g027720 Solanum pennellii HOM05D008695 ORTHO05D001422 1.3e-09 67.0 90 38.9
Sopen08g011480 Solanum pennellii HOM05D008695 ORTHO05D001422 1.3e-09 67.0 90 37.8
Nitab4.5_0006856g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.7e-09 66.6 37 75.7
Nitab4.5_0000274g0120 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.2e-09 66.2 31 90.3
Nitab4.5_0000915g0050 Nicotiana tabacum HOM05D004926 ORTHO05D001422 2.2e-09 66.2 36 83.3
Nitab4.5_0000276g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.9e-09 65.9 71 46.5
Nitab4.5_0024891g0010 Nicotiana tabacum HOM05D008440 ORTHO05D006375 3.7e-09 65.5 81 37.0
Nitab4.5_0005061g0030 Nicotiana tabacum HOM05D008440 ORTHO05D001422 6.4e-09 64.7 81 37.0
Sopen05g019090 Solanum pennellii HOM05D008695 ORTHO05D001422 6.4e-09 64.7 90 38.9
Nitab4.5_0000652g0010 Nicotiana tabacum HOM05D008440 ORTHO05D001422 1.4e-08 63.5 81 35.8
Nitab4.5_0004762g0050 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.4e-08 63.5 33 84.8
Nitab4.5_0013472g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.9e-08 63.2 31 87.1
Nitab4.5_0000276g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.2e-08 62.4 36 69.4
Nitab4.5_0000235g0090 Nicotiana tabacum HOM05D008440 ORTHO05D006375 4.1e-08 62.0 81 35.8
Nitab4.5_0004952g0010 Nicotiana tabacum HOM05D008440 ORTHO05D001422 5.4e-08 61.6 81 35.8
Nitab4.5_0011481g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 9.2e-08 60.8 36 66.7
Nitab4.5_0004478g0070 Nicotiana tabacum HOM05D008440 ORTHO05D006375 1.6e-07 60.1 61 44.3
Nitab4.5_0000235g0100 Nicotiana tabacum HOM05D008440 ORTHO05D006375 2.7e-07 59.3 81 35.8
Nitab4.5_0000157g0030 Nicotiana tabacum HOM05D008440 ORTHO05D011334 4.6e-07 58.5 80 33.8
Sopen03g025130 Solanum pennellii HOM05D000047 ORTHO05D013907 4.6e-07 58.5 114 32.5
Nitab4.5_0002314g0050 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.0e-06 57.4 38 60.5
PGSC0003DMG400014865 Solanum tuberosum HOM05D008695 ORTHO05D001422 3.0e-06 55.8 53 49.1
Nitab4.5_0000068g0360 Nicotiana tabacum HOM05D004926 ORTHO05D006375 6.6e-06 54.7 45 64.4
Nitab4.5_0000342g0240 Nicotiana tabacum HOM05D008440 ORTHO05D001422 8.6e-06 54.3 81 29.6


User provided reference genes

Program Settings