Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000926g0040 Nicotiana tabacum HOM05D005481 ORTHO05D006779 2.6e-274 948.3 559 100.0
Solyc04g008340.2 Solanum lycopersicum HOM05D005481 ORTHO05D006779 1.9e-192 676.4 597 73.4
Sopen04g003490 Solanum pennellii HOM05D005481 ORTHO05D006779 3.9e-166 589.0 500 76.2
CAN.G966.8 Capsicum annuum HOM05D005481 ORTHO05D006779 1.6e-143 513.8 484 72.5
Nitab4.5_0007504g0030 Nicotiana tabacum HOM05D005481 ORTHO05D006779 6.4e-124 448.7 292 88.7
Peaxi162Scf00337g00010 Petunia axillaris HOM05D005481 ORTHO05D006779 1.4e-115 421.0 284 84.5
MSTRG.13650 Avicennia marina HOM05D005481 ORTHO05D006779 7.0e-115 418.7 426 62.9
CiPaw.05G158800 Carya illinoinensis HOM05D005481 ORTHO05D006779 6.6e-113 412.1 421 61.5
Cc11_g05700 Coffea canephora HOM05D005481 ORTHO05D006779 6.6e-113 412.1 444 64.2
Actinidia20106 Actinidia chinensis HOM05D005481 ORTHO05D006779 3.3e-112 409.8 430 62.3
Rhsim09G0085400 Rhododendron simsii HOM05D005481 ORTHO05D006779 5.2e-110 402.5 457 57.1
CSS0011982 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 3.4e-109 399.8 430 63.5
Dinv20536 Davidia involucrata HOM05D005481 ORTHO05D006779 3.4e-109 399.8 429 66.4
Hma1.2p1_0095F.1_g047500 Hydrangea macrophylla HOM05D005481 ORTHO05D006779 7.5e-109 398.7 426 63.1
MD16G1013100 Malus domestica HOM05D005481 ORTHO05D006779 7.5e-109 398.7 421 64.8
Actinidia37496 Actinidia chinensis HOM05D005481 ORTHO05D006779 2.9e-108 396.7 429 61.3
SalBow2G3020 Salvia bowleyana HOM05D005481 ORTHO05D006779 2.9e-108 396.7 493 60.0
GSVIVG01011593001 Vitis vinifera HOM05D005481 ORTHO05D006779 2.9e-108 396.7 429 66.7
SGA_v2.0_scaffold65G22147 Striga asiatica HOM05D005481 ORTHO05D006779 4.9e-108 396.0 476 60.7
Duzib251G0084 Durio zibethinus HOM05D005481 ORTHO05D006779 6.4e-108 395.6 396 65.9
MELO3C020059.2 Cucumis melo HOM05D005481 ORTHO05D006779 8.3e-108 395.2 476 62.6
Potri.008G139900 Populus trichocarpa HOM05D005481 ORTHO05D006779 8.3e-108 395.2 430 60.5
CANSAT78G1557 Cannabis sativa HOM05D005481 ORTHO05D006779 9.2e-107 391.7 468 63.0
RcHm_v2.0_Chr4g0433701 Rosa chinensis HOM05D005481 ORTHO05D006779 9.2e-107 391.7 467 60.4
CsaV3_5G012960 Cucumis sativus L. HOM05D005481 ORTHO05D006779 1.6e-106 391.0 476 62.6
FAN17G1043 Fragaria x ananassa HOM05D005481 ORTHO05D006779 1.6e-106 391.0 433 64.2
PSO063G6983 Papaver somniferum HOM05D005481 ORTHO05D006779 2.1e-106 390.6 418 62.0
Glyma.05G137400 Glycine max HOM05D005481 ORTHO05D006779 6.0e-106 389.0 429 63.9
TWI77G0967 Tripterygium wilfordii HOM05D005481 ORTHO05D006779 7.8e-106 388.7 427 63.7
MD13G1015600 Malus domestica HOM05D005481 ORTHO05D006779 1.3e-105 387.9 423 64.3
Gohir.A12G153800 Gossypium hirsutum HOM05D005481 ORTHO05D006779 1.7e-105 387.5 422 59.5
Migut.E00569 Erythranthe guttata HOM05D005481 ORTHO05D006779 3.0e-105 386.7 424 64.4
Lj4g0017847 Lotus japonicus HOM05D005481 ORTHO05D006779 3.0e-105 386.7 415 66.3
Sed0010601 Sechium edule HOM05D005481 ORTHO05D006779 6.6e-105 385.6 474 57.4
FvH4_4g26130 Fragaria vesca HOM05D005481 ORTHO05D006779 2.5e-104 383.6 433 63.5
Eucgr.G02069 Eucalyptus grandis HOM05D005481 ORTHO05D006779 3.3e-104 383.3 471 57.3
Cfa022222 Carpinus fangiana HOM05D005481 ORTHO05D006779 4.3e-104 382.9 419 59.9
FAN07G1071 Fragaria x ananassa HOM05D005481 ORTHO05D006779 5.6e-104 382.5 433 61.7
TPR.G11925 Trifolium pratense HOM05D005481 ORTHO05D006779 5.6e-104 382.5 425 63.5
FAN22G2365 Fragaria x ananassa HOM05D005481 ORTHO05D006779 1.2e-103 381.3 488 58.0
Gorai.008G169700 Gossypium raimondii HOM05D005481 ORTHO05D006779 1.6e-103 380.9 437 58.4
Atru.chr11.1002 Acer truncatum HOM05D005481 ORTHO05D006779 2.1e-103 380.6 478 61.7
CSS0010274 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 2.1e-103 380.6 496 56.9
PSO782G1235 Papaver somniferum HOM05D005481 ORTHO05D006779 2.1e-103 380.6 418 61.5
TAR622G0189 Trochodendron aralioides HOM05D005481 ORTHO05D006779 3.6e-103 379.8 357 71.1
Gohir.D12G156900 Gossypium hirsutum HOM05D005481 ORTHO05D006779 8.1e-103 378.6 418 58.4
Aqoxy3G04008 Aquilegia oxysepala HOM05D005481 ORTHO05D006779 1.4e-102 377.9 421 64.4
COL.COLO4_27578 Corchorus olitorius HOM05D005481 ORTHO05D006779 1.4e-102 377.9 418 61.5
Sabra08G0106000 Salix brachista HOM05D005481 ORTHO05D006779 1.8e-102 377.5 421 60.1
Glyma.08G092700 Glycine max HOM05D005481 ORTHO05D006779 6.8e-102 375.6 428 62.1
Ca_18192_v3 Cicer arietinum L. HOM05D005481 ORTHO05D006779 1.2e-101 374.8 420 63.8
ClCG11G000990 Citrullus lanatus HOM05D005481 ORTHO05D006779 2.6e-101 373.6 422 61.4
Phvul.002G184200 Phaseolus vulgaris HOM05D005481 ORTHO05D006779 8.4e-100 368.6 414 63.3
arahy.Tifrunner.gnm1.ann1.31BYXQ Arachis hypogaea HOM05D005481 ORTHO05D006779 4.6e-98 362.8 355 69.9
TWI74G0731 Tripterygium wilfordii HOM05D005481 ORTHO05D006779 4.6e-98 362.8 428 56.3
Manes.15G138800 Manihot esculenta HOM05D005481 ORTHO05D006779 1.0e-97 361.7 425 61.4
Sp5g23100 Schrenkiella parvula HOM05D005481 ORTHO05D006779 3.0e-97 360.1 427 60.4
HanXRQChr17g0566271 Helianthus annuus HOM05D005481 ORTHO05D006779 8.7e-97 358.6 422 60.9
Lalb_Chr07g0187931 Lupinus albus HOM05D005481 ORTHO05D006779 2.5e-96 357.1 421 63.2
BcaC08g45998 Brassica carinata HOM05D005481 ORTHO05D006779 7.3e-96 355.5 435 60.2
ECA234G1527 Erigeron canadensis HOM05D005481 ORTHO05D006779 2.1e-95 354.0 406 60.8
Thhalv10018501m.g Eutrema salsugineum HOM05D005481 ORTHO05D006779 2.1e-95 354.0 428 60.5
Carub.0002s1458 Capsella rubella HOM05D005481 ORTHO05D006779 2.8e-95 353.6 423 61.0
C06p37930 Brassica napus HOM05D005481 ORTHO05D006779 6.2e-95 352.4 433 59.8
AT1G68100 Arabidopsis thaliana HOM05D005481 ORTHO05D006779 1.8e-94 350.9 420 61.4
Prupe.1G338200 Prunus persica HOM05D005481 ORTHO05D006779 1.8e-94 350.9 422 59.2
AL2G26810 Arabidopsis lyrata HOM05D005481 ORTHO05D006779 2.4e-94 350.5 420 61.2
THA.LOC104821909 Tarenaya hassleriana HOM05D005481 ORTHO05D006779 2.4e-94 350.5 425 60.0
EL10Ac8g18625 Beta vulgaris HOM05D005481 ORTHO05D006779 3.1e-94 350.1 350 67.1
C06p41930 Brassica napus HOM05D005481 ORTHO05D006779 4.0e-94 349.7 434 59.9
unitig_22.g5612 Utricularia gibba HOM05D005481 ORTHO05D006779 5.3e-94 349.4 462 55.8
A07p34580 Brassica napus HOM05D005481 ORTHO05D006779 9.0e-94 348.6 425 60.7
FAN12G2411 Fragaria x ananassa HOM05D005481 ORTHO05D006779 1.2e-93 348.2 433 60.5
BcaB03g15132 Brassica carinata HOM05D005481 ORTHO05D006779 2.6e-93 347.1 422 59.7
CDE05G3246 Ceratophyllum demersum HOM05D005481 ORTHO05D006779 4.4e-93 346.3 417 61.6
A07p32160 Brassica napus HOM05D005481 ORTHO05D006779 4.9e-92 342.8 440 58.4
BraA07t30846Z Brassica rapa HOM05D005481 ORTHO05D006779 4.9e-92 342.8 440 58.4
ATR0598G125 Amborella trichopoda HOM05D005481 ORTHO05D006779 1.4e-91 341.3 425 58.4
BolC6t38892H Brassica oleracea HOM05D005481 ORTHO05D006779 1.6e-90 337.8 435 58.6
MBI19_g01916_MAGBIO Magnolia biondii HOM05D005481 ORTHO05D006779 1.7e-89 334.3 434 57.8
BcaC08g46237 Brassica carinata HOM05D005481 ORTHO05D006779 3.9e-89 333.2 423 59.8
Os08g0467400 Oryza sativa ssp. japonica HOM05D005481 ORTHO05D006779 3.9e-89 333.2 354 64.4
CDE05G2094 Ceratophyllum demersum HOM05D005481 ORTHO05D006779 5.1e-89 332.8 355 64.2
BraA07t31076Z Brassica rapa HOM05D005481 ORTHO05D006779 4.3e-88 329.7 425 59.1
Aa31LG9G8490 Aethionema arabicum HOM05D005481 ORTHO05D006779 2.6e-85 320.5 480 55.4
QL03p039175 Quercus lobata HOM05D005481 ORTHO05D006779 4.5e-85 319.7 603 44.4
BolC6t39238H Brassica oleracea HOM05D005481 ORTHO05D006779 8.4e-84 315.5 423 58.2
Ciclev10018249m.g Citrus clementina HOM05D005481 ORTHO05D006779 1.0e-81 308.5 293 66.9
FAN12G2899 Fragaria x ananassa HOM05D005481 ORTHO05D006779 1.0e-81 308.5 295 64.1
VMungo0251G3144 Vigna mungo HOM05D005481 ORTHO05D000001 1.3e-81 308.1 290 63.8
DCAR_002653 Daucus carota HOM05D005481 ORTHO05D006779 6.7e-81 305.8 296 67.2
CARHR060770 Cardamine hirsuta HOM05D005481 ORTHO05D006779 7.4e-80 302.4 370 60.8
Lsat_1_v5_gn_4_24241 Lactuca sativa HOM05D005481 ORTHO05D006779 4.5e-77 293.1 420 56.0
AUR62033487 Chenopodium quinoa HOM05D005481 ORTHO05D006779 1.0e-76 292.0 351 57.3
Hund03668 Selenicereus undatus HOM05D005481 ORTHO05D006779 1.8e-73 281.2 350 61.1
Mapoly0096s0003 Marchantia polymorpha HOM05D005481 ORTHO05D006779 1.1e-72 278.5 431 49.4
Mapoly0096s0004 Marchantia polymorpha HOM05D005481 ORTHO05D006779 1.1e-72 278.5 431 49.4
Thecc.02G303600 Theobroma cacao HOM05D005481 ORTHO05D006779 5.7e-72 276.2 285 63.2
Pp3c12_24640 Physcomitrium patens HOM05D005481 ORTHO05D006779 3.1e-70 270.4 432 50.2
Sc10g0004950 Simmondsia chinensis HOM05D005481 ORTHO05D006779 2.0e-69 267.7 365 47.9
SMO164G0085 Selaginella moellendorffii HOM05D005481 ORTHO05D006779 1.4e-67 261.5 411 47.4
Duzib268G0472 Durio zibethinus HOM05D005481 ORTHO05D006779 2.1e-66 257.7 420 46.7
SMO271G0121 Selaginella moellendorffii HOM05D005481 ORTHO05D006779 3.7e-63 246.9 352 49.4
BcaB03g15400 Brassica carinata HOM05D005481 ORTHO05D006779 2.6e-61 240.7 187 71.7
Psat7g085400 Pisum sativum HOM05D005481 ORTHO05D006779 2.6e-61 240.7 326 58.3
BcaB03g15128 Brassica carinata HOM05D005481 ORTHO05D006779 1.9e-59 234.6 399 52.6
BcaC08g45996 Brassica carinata HOM05D005481 ORTHO05D006779 1.9e-59 234.6 421 50.8
AUR62011097 Chenopodium quinoa HOM05D005481 ORTHO05D006779 2.5e-56 224.2 384 46.4
AagrBONN_evm.TU.Sc2ySwM_368.3383 Anthoceros agrestis HOM05D005481 ORTHO05D006779 5.7e-56 223.0 337 54.3
HPP92_005759 Vanilla planifolia HOM05D005481 ORTHO05D006779 1.1e-54 218.8 425 44.2
Zm00001eb037820 Zea mays HOM05D005481 ORTHO05D006779 9.4e-51 205.7 326 53.7
BcaB03g15126 Brassica carinata HOM05D005481 ORTHO05D006779 1.0e-49 202.2 367 51.8
Haze_10808 Corylus avellana HOM05D005481 ORTHO05D006779 3.9e-49 200.3 630 37.3
Dinv20505 Davidia involucrata HOM05D005481 ORTHO05D006779 5.9e-37 159.8 202 67.8
Oeu062661.1 Olea europaea HOM05D005481 ORTHO05D006779 5.0e-36 156.8 103 84.5
CBR_g56846 Chara braunii HOM05D005481 ORTHO05D006779 1.5e-35 155.2 446 39.0
BcaB03g15129 Brassica carinata HOM05D005481 ORTHO05D006779 1.7e-31 141.7 297 50.2
SEGI_33830 Sequoiadendron giganteum HOM05D005481 ORTHO05D006779 6.3e-31 139.8 196 50.5
MCO07G486 Micromonas commoda HOM05D005481 ORTHO05D006779 2.4e-30 137.9 319 32.3
CSS0044880 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 4.1e-30 137.1 119 68.9
Cpa.g.sc326.1 Carica papaya HOM05D005481 ORTHO05D006779 5.0e-28 130.2 87 81.6
TAR374G1742 Trochodendron aralioides HOM05D005481 ORTHO05D006779 1.2e-24 119.0 172 63.4
Cpa.g.sc326.2 Carica papaya HOM05D005481 ORTHO05D006779 4.9e-23 113.6 105 61.9
TAR374G0503 Trochodendron aralioides HOM05D005481 ORTHO05D006779 7.0e-22 109.8 59 88.1
BcaB03g15399 Brassica carinata HOM05D005481 ORTHO05D006779 1.6e-21 108.6 90 87.8
Ah.09g225960 Amaranthus hybridus HOM05D005481 ORTHO05D006779 1.6e-18 98.6 78 65.4
VMungo0251G2403 Vigna mungo HOM05D005481 ORTHO05D006779 3.4e-16 90.9 98 57.1
Sc10g0005080 Simmondsia chinensis HOM05D005481 ORTHO05D006779 5.7e-16 90.1 77 61.0
CSS0008657 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 3.7e-15 87.4 64 70.3
Oeu062663.1 Olea europaea HOM05D005481 ORTHO05D006779 8.3e-15 86.3 73 93.2
CSS0020286 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 7.0e-14 83.2 96 54.2
C06p31420 Brassica napus HOM05D005481 ORTHO05D006779 8.0e-10 69.7 67 56.7
CSS0022702 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 3.1e-09 67.8 88 47.7
HanXRQChr16g0527591 Helianthus annuus HOM05D005481 ORTHO05D006779 5.8e-08 63.5 35 85.7
MCO14G334 Micromonas commoda HOM05D005481 ORTHO05D006779 4.9e-07 60.5 174 28.7


User provided reference genes

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