Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000921g0010 Nicotiana tabacum HOM05D004408 ORTHO05D005486 0.0e+00 1664.0 853 100.0
Nitab4.5_0000162g0030 Nicotiana tabacum HOM05D004408 ORTHO05D005486 0.0e+00 1473.4 1056 76.3
Peaxi162Scf01040g00010 Petunia axillaris HOM05D004408 ORTHO05D005486 0.0e+00 1368.6 1089 69.1
CAN.G167.11 Capsicum annuum HOM05D004408 ORTHO05D005486 0.0e+00 1361.7 1063 70.3
Solyc09g018370.4 Solanum lycopersicum HOM05D004408 ORTHO05D005486 0.0e+00 1359.0 1056 70.5
Sopen09g011530 Solanum pennellii HOM05D004408 ORTHO05D005486 0.0e+00 1355.9 1056 70.4
Dinv05121 Davidia involucrata HOM05D004408 ORTHO05D005486 0.0e+00 1101.3 1081 57.4
Cc02_g31380 Coffea canephora HOM05D004408 ORTHO05D005486 5.3e-311 1070.8 1065 57.7
Cfa006478 Carpinus fangiana HOM05D004408 ORTHO05D005486 2.6e-310 1068.5 1080 55.8
CSS0006895 Camellia sinensis var. sinensis HOM05D004408 ORTHO05D005486 6.4e-309 1063.9 1072 55.6
QL03p022358 Quercus lobata HOM05D004408 ORTHO05D005486 2.4e-308 1062.0 1080 55.3
GSVIVG01021873001 Vitis vinifera HOM05D004408 ORTHO05D005486 5.6e-305 1050.8 1069 54.9
Ciclev10000022m.g Citrus clementina HOM05D004408 ORTHO05D005486 8.9e-303 1043.5 1079 53.9
CiPaw.07G007800 Carya illinoinensis HOM05D004408 ORTHO05D005486 3.7e-301 1038.1 1080 55.0
Atru.chr2.666 Acer truncatum HOM05D004408 ORTHO05D005486 7.8e-299 1030.4 1083 53.6
Rhsim05G0150300 Rhododendron simsii HOM05D004408 ORTHO05D005486 5.6e-297 1024.2 1101 53.0
COL.COLO4_15257 Corchorus olitorius HOM05D004408 ORTHO05D005486 2.8e-296 1021.9 1082 52.5
Duzib177G0039 Durio zibethinus HOM05D004408 ORTHO05D005486 3.1e-295 1018.5 1084 53.4
Sabra13G0034100 Salix brachista HOM05D004408 ORTHO05D005486 8.9e-295 1016.9 1114 51.8
Potri.013G035100 Populus trichocarpa HOM05D004408 ORTHO05D005486 1.2e-294 1016.5 1078 53.2
TWI56G0724 Tripterygium wilfordii HOM05D004408 ORTHO05D005486 5.8e-294 1014.2 1079 52.9
TAR365G0706 Trochodendron aralioides HOM05D004408 ORTHO05D005486 1.7e-293 1012.7 1114 52.2
Thecc.05G290600 Theobroma cacao HOM05D004408 ORTHO05D005486 1.6e-291 1006.1 1083 52.5
Migut.B01071 Erythranthe guttata HOM05D004408 ORTHO05D005486 4.6e-291 1004.6 1062 53.4
MD04G1218000 Malus domestica HOM05D004408 ORTHO05D005486 1.3e-290 1003.0 1079 52.8
Prupe.6G338000 Prunus persica HOM05D004408 ORTHO05D005486 3.9e-290 1001.5 1081 52.5
FvH4_6g10420 Fragaria vesca HOM05D004408 ORTHO05D005486 5.1e-290 1001.1 1080 53.1
RcHm_v2.0_Chr3g0461321 Rosa chinensis HOM05D004408 ORTHO05D005486 6.6e-290 1000.7 1079 53.3
MSTRG.20441 Avicennia marina HOM05D004408 ORTHO05D005486 1.5e-289 999.6 1062 52.5
Lalb_Chr06g0167911 Lupinus albus HOM05D004408 ORTHO05D005486 1.5e-289 999.6 1071 53.0
Nn1g02333 Nelumbo nucifera HOM05D004408 ORTHO05D005486 3.3e-289 998.4 1083 52.8
CsaV3_1G039670 Cucumis sativus L. HOM05D004408 ORTHO05D005486 7.3e-289 997.3 1080 53.2
Glyma.20G229100 Glycine max HOM05D004408 ORTHO05D005486 7.3e-289 997.3 1068 52.9
Glyma.10G159500 Glycine max HOM05D004408 ORTHO05D005486 1.2e-288 996.5 1070 53.3
FAN09G0115 Fragaria x ananassa HOM05D004408 ORTHO05D005486 6.2e-288 994.2 1065 53.1
Phvul.007G184950 Phaseolus vulgaris HOM05D004408 ORTHO05D005486 1.5e-286 989.6 1069 52.3
Sed0014385 Sechium edule HOM05D004408 ORTHO05D005486 1.7e-285 986.1 1076 53.0
FAN05G2697 Fragaria x ananassa HOM05D004408 ORTHO05D005486 3.8e-285 984.9 1065 52.7
CANSAT54G0296 Cannabis sativa HOM05D004408 ORTHO05D005486 8.4e-285 983.8 1076 53.4
DCAR_001927 Daucus carota HOM05D004408 ORTHO05D005486 8.4e-285 983.8 1046 53.8
FAN02G3979 Fragaria x ananassa HOM05D004408 ORTHO05D005486 1.9e-284 982.6 1074 52.5
Gohir.A11G256300 Gossypium hirsutum HOM05D004408 ORTHO05D005486 3.2e-284 981.9 1081 51.9
Gorai.007G286000 Gossypium raimondii HOM05D004408 ORTHO05D005486 1.2e-283 979.9 1081 51.9
PSO761G0213 Papaver somniferum HOM05D004408 ORTHO05D005486 4.6e-283 978.0 1099 51.0
PSO210G7697 Papaver somniferum HOM05D004408 ORTHO05D005486 1.7e-282 976.1 1101 50.9
ECA232G0933 Erigeron canadensis HOM05D004408 ORTHO05D005486 8.7e-282 973.8 1058 51.8
Gohir.D11G266000 Gossypium hirsutum HOM05D004408 ORTHO05D005486 4.3e-281 971.5 1081 51.7
Lj5g0005673 Lotus japonicus HOM05D004408 ORTHO05D005486 1.3e-280 969.9 1073 51.5
MBI05_g21270_MAGBIO Magnolia biondii HOM05D004408 ORTHO05D005486 2.1e-280 969.1 1101 51.0
PGR083G2727 Punica granatum HOM05D004408 ORTHO05D005486 1.4e-279 966.5 1072 52.0
Thhalv10003510m.g Eutrema salsugineum HOM05D004408 ORTHO05D005486 1.8e-279 966.1 1069 51.1
Lalb_Chr21g0310861 Lupinus albus HOM05D004408 ORTHO05D005486 1.8e-279 966.1 1077 51.6
C02p57800 Brassica napus HOM05D004408 ORTHO05D005486 3.1e-279 965.3 1057 51.4
BcaC03g17767 Brassica carinata HOM05D004408 ORTHO05D005486 6.9e-279 964.1 1057 51.3
BcaB07g34188 Brassica carinata HOM05D004408 ORTHO05D005486 4.5e-278 961.4 1064 50.9
BolC2t11853H Brassica oleracea HOM05D004408 ORTHO05D005486 7.6e-278 960.7 1057 51.2
ClCG03G016280 Citrullus lanatus HOM05D004408 ORTHO05D005486 9.9e-278 960.3 1081 52.0
THA.LOC104818650 Tarenaya hassleriana HOM05D004408 ORTHO05D005486 9.9e-278 960.3 1067 51.5
Ca_10066_v3 Cicer arietinum L. HOM05D004408 ORTHO05D005486 2.2e-277 959.1 1071 51.3
TPR.G11136 Trifolium pratense HOM05D004408 ORTHO05D005486 1.1e-276 956.8 1066 51.1
Carub.0006s2545 Capsella rubella HOM05D004408 ORTHO05D005486 4.2e-276 954.9 1071 51.2
C07p40460 Brassica napus HOM05D004408 ORTHO05D005486 7.1e-276 954.1 1067 51.2
BolC7t44581H Brassica oleracea HOM05D004408 ORTHO05D005486 7.1e-276 954.1 1067 51.2
Sp2g20340 Schrenkiella parvula HOM05D004408 ORTHO05D005486 9.3e-276 953.7 1069 50.5
BraA06t26696Z Brassica rapa HOM05D004408 ORTHO05D005486 1.2e-275 953.4 1067 50.9
AT5G27970 Arabidopsis thaliana HOM05D004408 ORTHO05D005486 2.7e-275 952.2 1071 50.9
arahy.Tifrunner.gnm1.ann1.4PM453 Arachis hypogaea HOM05D004408 ORTHO05D005486 3.5e-275 951.8 1141 49.2
Aqoxy2G03396 Aquilegia oxysepala HOM05D004408 ORTHO05D005486 1.0e-274 950.3 1079 50.4
AL6G40140 Arabidopsis lyrata HOM05D004408 ORTHO05D005486 1.5e-273 946.4 1070 50.6
CSS0009913 Camellia sinensis var. sinensis HOM05D004408 ORTHO05D005486 1.9e-273 946.0 1044 51.8
HanXRQChr11g0322991 Helianthus annuus HOM05D004408 ORTHO05D005486 2.5e-273 945.7 1060 50.9
A02p38480 Brassica napus HOM05D004408 ORTHO05D005486 7.4e-273 944.1 1059 50.9
BraA02t08826Z Brassica rapa HOM05D004408 ORTHO05D005486 7.4e-273 944.1 1059 50.9
SalBow8G3789 Salvia bowleyana HOM05D004408 ORTHO05D005486 4.0e-271 938.3 1062 50.4
Medtr1g081710 Medicago truncatula HOM05D004408 ORTHO05D005486 9.0e-271 937.2 1048 51.3
Sc06g0003710 Simmondsia chinensis HOM05D004408 ORTHO05D005486 3.8e-269 931.8 1071 51.1
BcaNung04259 Brassica carinata HOM05D004408 ORTHO05D005486 2.5e-265 919.1 1066 50.1
EL10Ac4g09198 Beta vulgaris HOM05D004408 ORTHO05D005486 3.7e-264 915.2 1069 50.4
Aa31LG11G8830 Aethionema arabicum HOM05D004408 ORTHO05D005486 3.1e-263 912.1 1080 49.0
Ah.04g162440 Amaranthus hybridus HOM05D004408 ORTHO05D005486 6.9e-263 911.0 1069 49.8
AUR62000963 Chenopodium quinoa HOM05D004408 ORTHO05D005486 1.3e-258 896.7 1048 50.1
CDE10G0751 Ceratophyllum demersum HOM05D004408 ORTHO05D005486 1.4e-250 870.2 1055 48.3
ATR0697G205 Amborella trichopoda HOM05D004408 ORTHO05D005486 5.7e-249 864.8 1123 46.4
Manes.09G157400 Manihot esculenta HOM05D004408 ORTHO05D005486 9.1e-247 857.4 935 52.0
Lsat_1_v5_gn_4_142681 Lactuca sativa HOM05D004408 ORTHO05D005486 2.0e-246 856.3 1019 49.3
Hund06994 Selenicereus undatus HOM05D004408 ORTHO05D005486 7.7e-246 854.4 995 50.5
AUR62005003 Chenopodium quinoa HOM05D004408 ORTHO05D005486 1.0e-245 854.0 1035 48.9
Lj7A478T84 Lonicera japonica HOM05D004408 ORTHO05D005486 5.5e-244 848.2 650 67.5
QL08p006198 Quercus lobata HOM05D004408 ORTHO05D005486 3.1e-239 832.4 658 66.3
Psat6g147800 Pisum sativum HOM05D004408 ORTHO05D005486 2.7e-235 819.3 924 50.4
Haze_04313 Corylus avellana HOM05D004408 ORTHO05D005486 1.0e-234 817.4 699 61.8
Cpa.g.sc117.51 Carica papaya HOM05D004408 ORTHO05D005486 4.5e-230 802.0 654 63.6
Eucgr.B01725 Eucalyptus grandis HOM05D004408 ORTHO05D005486 2.3e-226 789.6 1079 45.1
arahy.Tifrunner.gnm1.ann1.L7F5GT Arachis hypogaea HOM05D004408 ORTHO05D005486 1.3e-221 773.9 649 62.4
FAN05G3761 Fragaria x ananassa HOM05D004408 ORTHO05D005486 1.1e-220 770.8 656 62.7
vmacro19678 Vaccinium macrocarpon HOM05D004408 ORTHO05D005486 1.6e-219 766.9 1320 38.9
SGA_v2.0_scaffold221G42679 Striga asiatica HOM05D004408 ORTHO05D005486 8.8e-218 761.1 634 62.8
CARHR185700 Cardamine hirsuta HOM05D004408 ORTHO05D005486 2.4e-215 753.1 646 59.9
SHI08350 Sapria himalayana HOM05D004408 ORTHO05D005486 1.8e-202 710.3 1075 41.7
HPP92_012130 Vanilla planifolia HOM05D004408 ORTHO05D005486 7.0e-191 671.8 678 52.9
A06p37770 Brassica napus HOM05D004408 ORTHO05D005486 7.6e-169 598.6 705 49.4
MELO3C015391.2 Cucumis melo HOM05D004408 ORTHO05D005486 3.8e-168 596.3 659 51.3
Os01g0772700 Oryza sativa ssp. japonica HOM05D004408 ORTHO05D005486 7.8e-166 588.6 899 42.6
AagrBONN_evm.TU.Sc2ySwM_228.3627 Anthoceros agrestis HOM05D004408 ORTHO05D005486 5.1e-165 585.9 1187 34.3
SMO169G0216 Selaginella moellendorffii HOM05D004408 ORTHO05D005486 3.4e-161 573.2 1062 35.3
HPP92_012122 Vanilla planifolia HOM05D004408 ORTHO05D005486 4.9e-160 569.3 1052 37.1
VMungo0720G1928 Vigna mungo HOM05D004408 ORTHO05D005486 6.0e-158 562.4 676 48.4
unitig_0.g2223 Utricularia gibba HOM05D004408 ORTHO05D005486 2.2e-144 517.3 904 39.0
Mapoly0167s0007 Marchantia polymorpha HOM05D004408 ORTHO05D005486 1.5e-140 504.6 1156 31.7
CBR_g18881 Chara braunii HOM05D004408 ORTHO05D005486 3.7e-131 473.4 1272 29.1
CBR_g23067 Chara braunii HOM05D004408 ORTHO05D005486 2.0e-113 414.5 1203 28.4
Pp3c17_790 Physcomitrium patens HOM05D004408 ORTHO05D005486 3.6e-102 377.1 1001 28.9
VMungo0720G0329 Vigna mungo HOM05D004408 ORTHO05D005486 6.6e-96 356.3 412 50.7
Haze_04314 Corylus avellana HOM05D004408 ORTHO05D005486 4.9e-83 313.5 213 75.6
Lj7A478T83 Lonicera japonica HOM05D004408 ORTHO05D005486 7.8e-81 306.2 225 71.1
arahy.Tifrunner.gnm1.ann1.N9X86H Arachis hypogaea HOM05D004408 ORTHO05D005486 6.0e-73 280.0 340 50.3
HPP92_012131 Vanilla planifolia HOM05D004408 ORTHO05D005486 1.1e-71 275.8 208 67.8
Zm00001eb151850 Zea mays HOM05D004408 ORTHO05D005486 1.1e-45 189.5 120 73.3
SEGI_02301 Sequoiadendron giganteum HOM05D004408 ORTHO05D005486 5.7e-31 140.6 152 50.0
Sopen09g011510 Solanum pennellii HOM05D004408 ORTHO05D005486 1.5e-28 132.5 81 77.8
Eucgr.L01484 Eucalyptus grandis HOM05D004408 ORTHO05D005486 2.6e-28 131.7 115 59.1
Glyma.05G081451 Glycine max HOM05D004408 ORTHO05D005486 1.7e-27 129.0 69 87.0
Zm00001eb151800 Zea mays HOM05D004408 ORTHO05D005486 1.4e-26 125.9 112 62.5
Cre13.g575250 Chlamydomonas reinhardtii HOM05D004408 ORTHO05D005486 4.2e-26 124.4 147 40.8
SEGI_11331 Sequoiadendron giganteum HOM05D004408 ORTHO05D005486 7.2e-26 123.6 124 51.6
Zm00001eb151820 Zea mays HOM05D004408 ORTHO05D005486 2.1e-25 122.1 163 41.1
MCO03G609 Micromonas commoda HOM05D004408 ORTHO05D005486 2.3e-24 118.6 279 30.1
SEGI_37886 Sequoiadendron giganteum HOM05D004408 ORTHO05D005486 5.9e-20 104.0 74 70.3
PRCOL_00003187 Prasinoderma coloniale HOM05D004408 ORTHO05D005486 2.9e-19 101.7 597 22.3
EL10Ac8g20356 Beta vulgaris HOM05D004408 ORTHO05D000006 6.5e-19 100.5 112 50.9
Hma1.2p1_0083F.1_g042740 Hydrangea macrophylla HOM05D004408 ORTHO05D005486 4.2e-10 71.2 111 38.7
Cpa.g.sc117.53 Carica papaya HOM05D004408 ORTHO05D005486 5.5e-10 70.9 100 46.0
Actinidia18658 Actinidia chinensis HOM05D004408 ORTHO05D002112 2.7e-09 68.6 47 68.1


User provided reference genes

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