Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000915g0140 Nicotiana tabacum HOM05D004687 ORTHO05D006002 0.0e+00 1147.9 592 100.0
Nitab4.5_0009238g0010 Nicotiana tabacum HOM05D004687 ORTHO05D006002 6.2e-287 990.3 589 89.0
Peaxi162Scf00020g01410 Petunia axillaris HOM05D004687 ORTHO05D006002 6.5e-260 900.6 593 81.3
PGSC0003DMG400000194 Solanum tuberosum HOM05D004687 ORTHO05D006002 9.1e-254 880.2 635 74.5
Solyc01g095090.3 Solanum lycopersicum HOM05D004687 ORTHO05D006002 2.3e-241 839.0 593 75.7
Peaxi162Scf00403g00830 Petunia axillaris HOM05D004687 ORTHO05D006002 2.4e-174 616.3 517 65.0
Dinv32519 Davidia involucrata HOM05D004687 ORTHO05D006002 1.9e-166 590.1 602 56.6
Cc02_g38540 Coffea canephora HOM05D004687 ORTHO05D006002 1.0e-164 584.3 607 57.5
PGSC0003DMG400033881 Solanum tuberosum HOM05D004687 ORTHO05D006002 5.6e-163 578.6 515 61.9
Sopen05g028410 Solanum pennellii HOM05D004687 ORTHO05D006002 1.5e-160 570.5 513 61.2
Lj7A508T42 Lonicera japonica HOM05D004687 ORTHO05D006002 4.2e-158 562.4 600 57.0
Solyc05g050020.3 Solanum lycopersicum HOM05D004687 ORTHO05D006002 9.3e-158 561.2 513 60.6
Oeu063679.1 Olea europaea HOM05D004687 ORTHO05D006002 3.1e-153 546.2 598 53.8
CiPaw.02G034500 Carya illinoinensis HOM05D004687 ORTHO05D006002 2.1e-149 533.5 611 52.2
TAR374G1208 Trochodendron aralioides HOM05D004687 ORTHO05D006002 1.5e-144 517.3 606 51.7
CSS0026327 Camellia sinensis var. sinensis HOM05D004687 ORTHO05D006002 1.9e-142 510.4 602 52.3
MSTRG.20861 Avicennia marina HOM05D004687 ORTHO05D006002 9.4e-142 508.1 610 50.7
Migut.B01796 Erythranthe guttata HOM05D004687 ORTHO05D006002 7.9e-141 505.0 591 51.8
GSVIVG01026963001 Vitis vinifera HOM05D004687 ORTHO05D006002 8.8e-140 501.5 592 50.7
DCAR_006947 Daucus carota HOM05D004687 ORTHO05D006002 2.2e-135 486.9 566 52.1
CANSAT56G3669 Cannabis sativa HOM05D004687 ORTHO05D006002 2.5e-134 483.4 598 49.7
Atru.chr5.577 Acer truncatum HOM05D004687 ORTHO05D006002 2.8e-130 469.9 591 49.2
Sabra14G0065300 Salix brachista HOM05D004687 ORTHO05D006002 1.8e-129 467.2 564 47.5
Lj3g0008911 Lotus japonicus HOM05D004687 ORTHO05D006002 3.1e-129 466.5 597 48.7
Atru.chr5.560 Acer truncatum HOM05D004687 ORTHO05D006002 9.1e-129 464.9 596 48.8
Manes.01G252600 Manihot esculenta HOM05D004687 ORTHO05D006002 3.5e-128 463.0 597 48.7
COL.COLO4_12774 Corchorus olitorius HOM05D004687 ORTHO05D006002 3.8e-127 459.5 593 47.2
Thecc.01G352900 Theobroma cacao HOM05D004687 ORTHO05D006002 8.5e-127 458.4 594 48.8
Sc01g0003240 Simmondsia chinensis HOM05D004687 ORTHO05D006002 1.9e-126 457.2 600 48.2
Duzib138G0011 Durio zibethinus HOM05D004687 ORTHO05D006002 5.5e-126 455.7 597 48.6
Nn1g01677 Nelumbo nucifera HOM05D004687 ORTHO05D006002 9.4e-126 454.9 584 49.8
QL04p055402 Quercus lobata HOM05D004687 ORTHO05D006002 3.9e-124 449.5 700 44.0
Aqoxy7G00187 Aquilegia oxysepala HOM05D004687 ORTHO05D006002 2.0e-123 447.2 616 46.8
ClCG06G003410 Citrullus lanatus HOM05D004687 ORTHO05D006002 7.4e-123 445.3 593 48.2
Psat4g212240 Pisum sativum HOM05D004687 ORTHO05D006002 7.4e-123 445.3 604 47.5
TWI14G1112 Tripterygium wilfordii HOM05D004687 ORTHO05D006002 9.7e-123 444.9 594 49.0
Cfa003875 Carpinus fangiana HOM05D004687 ORTHO05D006002 1.3e-122 444.5 574 49.5
Sed0003221 Sechium edule HOM05D004687 ORTHO05D006002 1.7e-122 444.1 591 48.4
Eucgr.D02323 Eucalyptus grandis HOM05D004687 ORTHO05D006002 3.1e-121 439.9 590 46.8
Prupe.2G177100 Prunus persica HOM05D004687 ORTHO05D006002 5.3e-121 439.1 596 47.0
Cpa.g.sc184.31 Carica papaya HOM05D004687 ORTHO05D006002 1.2e-120 438.0 595 46.9
Phvul.010G104100 Phaseolus vulgaris HOM05D004687 ORTHO05D006002 3.5e-120 436.4 609 47.9
Glyma.16G032000 Glycine max HOM05D004687 ORTHO05D006002 5.9e-120 435.6 617 46.5
Ciclev10019565m.g Citrus clementina HOM05D004687 ORTHO05D006002 1.0e-119 434.9 586 45.9
Potri.014G089800 Populus trichocarpa HOM05D004687 ORTHO05D006002 1.7e-119 434.1 560 47.7
Gohir.D11G097000 Gossypium hirsutum HOM05D004687 ORTHO05D006002 5.0e-119 432.6 591 45.9
Rhsim07G0010800 Rhododendron simsii HOM05D004687 ORTHO05D006002 6.5e-119 432.2 641 44.5
Medtr8g028580 Medicago truncatula HOM05D004687 ORTHO05D006002 1.1e-118 431.4 597 46.4
Gorai.007G103300 Gossypium raimondii HOM05D004687 ORTHO05D006002 1.5e-118 431.0 591 45.7
Lalb_Chr10g0096671 Lupinus albus HOM05D004687 ORTHO05D006002 6.1e-117 425.6 597 45.4
Sopen01g038880 Solanum pennellii HOM05D004687 ORTHO05D006002 6.1e-117 425.6 318 72.6
VMungo0331G0070 Vigna mungo HOM05D004687 ORTHO05D006002 8.0e-117 425.2 609 47.0
arahy.Tifrunner.gnm1.ann1.PSKN5N Arachis hypogaea HOM05D004687 ORTHO05D006002 2.6e-115 420.2 606 44.9
arahy.Tifrunner.gnm1.ann1.X9JZY0 Arachis hypogaea HOM05D004687 ORTHO05D006002 5.7e-115 419.1 606 44.7
SalBow3G3455 Salvia bowleyana HOM05D004687 ORTHO05D006002 9.8e-115 418.3 640 43.6
PSO478G3840 Papaver somniferum HOM05D004687 ORTHO05D006002 2.8e-114 416.8 615 43.7
SGA_v2.0_scaffold95G28807 Striga asiatica HOM05D004687 ORTHO05D006002 8.3e-114 415.2 608 44.2
Hund27243 Selenicereus undatus HOM05D004687 ORTHO05D006002 1.4e-113 414.5 599 46.2
Ca_03498_v3 Cicer arietinum L. HOM05D004687 ORTHO05D006002 1.6e-112 411.0 597 46.1
CSS0036615 Camellia sinensis var. sinensis HOM05D004687 ORTHO05D006002 3.5e-112 409.8 553 46.5
PSO266G0021 Papaver somniferum HOM05D004687 ORTHO05D006002 2.2e-111 407.1 610 43.3
RcHm_v2.0_Chr1g0357651 Rosa chinensis HOM05D004687 ORTHO05D006002 1.9e-110 404.1 613 44.4
MELO3C021180.2 Cucumis melo HOM05D004687 ORTHO05D006002 1.6e-109 401.0 596 45.1
PGR031G1931 Punica granatum HOM05D004687 ORTHO05D006002 1.6e-109 401.0 610 43.6
Nitab4.5_0002262g0080 Nicotiana tabacum HOM05D004687 ORTHO05D006002 3.6e-109 399.8 526 49.4
THA.LOC104817038 Tarenaya hassleriana HOM05D004687 ORTHO05D006002 6.1e-109 399.1 582 44.2
Lsat_1_v5_gn_7_3881 Lactuca sativa HOM05D004687 ORTHO05D006002 8.0e-109 398.7 595 43.5
MBI04_g26968_MAGBIO Magnolia biondii HOM05D004687 ORTHO05D006002 1.8e-108 397.5 606 44.6
MD01G1070600 Malus domestica HOM05D004687 ORTHO05D006002 8.3e-106 388.7 593 43.3
Actinidia20159 Actinidia chinensis HOM05D004687 ORTHO05D006002 1.8e-105 387.5 619 43.1
FvH4_7g15320 Fragaria vesca HOM05D004687 ORTHO05D006002 1.6e-104 384.4 601 42.9
FAN06G2065 Fragaria x ananassa HOM05D004687 ORTHO05D006002 1.6e-104 384.4 601 42.9
FAN06G2774 Fragaria x ananassa HOM05D004687 ORTHO05D006002 1.0e-103 381.7 601 42.8
FAN10G0227 Fragaria x ananassa HOM05D004687 ORTHO05D006002 1.1e-102 378.3 601 42.4
CSS0041346 Camellia sinensis var. sinensis HOM05D004687 ORTHO05D006002 4.7e-101 372.9 497 49.1
Thhalv10029490m.g Eutrema salsugineum HOM05D004687 ORTHO05D006002 3.4e-99 366.7 593 42.8
CSS0021310 Camellia sinensis var. sinensis HOM05D004687 ORTHO05D006002 1.3e-98 364.8 553 43.2
Carub.0006s3633 Capsella rubella HOM05D004687 ORTHO05D006002 2.9e-98 363.6 593 42.8
AT4G01270 Arabidopsis thaliana HOM05D004687 ORTHO05D006002 3.7e-98 363.2 593 43.2
Sp6g00860 Schrenkiella parvula HOM05D004687 ORTHO05D006002 4.9e-98 362.8 597 43.0
ECA236G1242 Erigeron canadensis HOM05D004687 ORTHO05D006002 1.8e-97 360.9 591 42.1
BolC3t16169H Brassica oleracea HOM05D004687 ORTHO05D006002 1.2e-96 358.2 600 43.2
BcaB01g02150 Brassica carinata HOM05D004687 ORTHO05D006002 2.0e-96 357.5 592 43.2
A03p31950 Brassica napus HOM05D004687 ORTHO05D006002 2.7e-96 357.1 600 42.7
BcaC01g06853 Brassica carinata HOM05D004687 ORTHO05D006002 4.6e-96 356.3 600 43.0
A09p00090 Brassica napus HOM05D004687 ORTHO05D006002 5.9e-96 355.9 593 42.8
BraA03t12367Z Brassica rapa HOM05D004687 ORTHO05D006002 7.8e-96 355.5 600 43.3
C03p38970 Brassica napus HOM05D004687 ORTHO05D006002 1.3e-95 354.8 594 43.1
BraA09t35739Z Brassica rapa HOM05D004687 ORTHO05D006002 1.3e-95 354.8 597 44.2
Aa31LG5G750 Aethionema arabicum HOM05D004687 ORTHO05D006002 1.7e-95 354.4 594 41.8
CARHR249040 Cardamine hirsuta HOM05D004687 ORTHO05D006002 8.6e-95 352.1 592 41.9
AL6G52120 Arabidopsis lyrata HOM05D004687 ORTHO05D006002 1.5e-94 351.3 593 41.5
BcaC04g24137 Brassica carinata HOM05D004687 ORTHO05D006002 1.5e-94 351.3 596 43.1
C09p00700 Brassica napus HOM05D004687 ORTHO05D006002 1.5e-94 351.3 596 43.1
BolC9t53004H Brassica oleracea HOM05D004687 ORTHO05D006002 1.5e-94 351.3 596 43.1
TPR.G28289 Trifolium pratense HOM05D004687 ORTHO05D006002 3.3e-94 350.1 559 44.7
unitig_699.g19806 Utricularia gibba HOM05D004687 ORTHO05D006002 3.3e-94 350.1 621 40.6
Haze_15561 Corylus avellana HOM05D004687 ORTHO05D006002 8.0e-93 345.5 606 42.7
Ah.05g180180 Amaranthus hybridus HOM05D004687 ORTHO05D006002 4.0e-92 343.2 301 62.5
Nitab4.5_0003779g0080 Nicotiana tabacum HOM05D004687 ORTHO05D006002 3.2e-89 333.6 488 46.7
FAN10G4173 Fragaria x ananassa HOM05D004687 ORTHO05D006002 1.2e-88 331.6 600 39.3
vmacro13232 Vaccinium macrocarpon HOM05D004687 ORTHO05D006002 1.6e-88 331.3 301 60.5
AUR62004410 Chenopodium quinoa HOM05D004687 ORTHO05D006002 9.5e-86 322.0 608 40.5
ATR0661G462 Amborella trichopoda HOM05D004687 ORTHO05D006002 8.1e-85 318.9 615 37.6
HanXRQChr06g0170331 Helianthus annuus HOM05D004687 ORTHO05D006002 8.9e-84 315.5 583 38.9
CsaV3_6G000900 Cucumis sativus L. HOM05D004687 ORTHO05D006002 1.7e-82 311.2 501 44.1
HanXRQChr04g0120761 Helianthus annuus HOM05D004687 ORTHO05D006002 1.3e-79 301.6 595 37.3
SEGI_33633 Sequoiadendron giganteum HOM05D004687 ORTHO05D006002 3.0e-79 300.4 604 36.6
BcaB01g02289 Brassica carinata HOM05D004687 ORTHO05D006002 2.0e-75 287.7 596 38.8
Prupe.2G177000 Prunus persica HOM05D004687 ORTHO05D006002 4.4e-75 286.6 528 38.3
Zm00001eb416420 Zea mays HOM05D004687 ORTHO05D006002 1.7e-74 284.6 599 36.4
Gohir.A11G092200 Gossypium hirsutum HOM05D004687 ORTHO05D006002 2.2e-74 284.3 448 42.2
MD01G1070500 Malus domestica HOM05D004687 ORTHO05D006002 3.7e-74 283.5 520 37.9
Os08g0151700 Oryza sativa ssp. japonica HOM05D004687 ORTHO05D006002 8.4e-74 282.3 603 35.5
EL10Ac1g00358 Beta vulgaris HOM05D004687 ORTHO05D006002 9.2e-73 278.9 590 38.3
AUR62022616 Chenopodium quinoa HOM05D004687 ORTHO05D006002 1.9e-70 271.2 499 41.3
Lalb_Chr17g0339021 Lupinus albus HOM05D004687 ORTHO05D006002 5.4e-65 253.1 224 62.1
FAN01G0098 Fragaria x ananassa HOM05D004687 ORTHO05D006002 7.1e-65 252.7 529 38.2
SGA_v2.0_scaffold95G28804 Striga asiatica HOM05D004687 ORTHO05D006002 3.1e-60 237.3 360 43.6
Pp3c23_12760 Physcomitrium patens HOM05D004687 ORTHO05D006002 1.3e-55 221.9 626 30.4
RcHm_v2.0_Chr2g0111671 Rosa chinensis HOM05D004687 ORTHO05D006002 1.3e-55 221.9 266 48.5
FvH4_1g19860 Fragaria vesca HOM05D004687 ORTHO05D006002 1.5e-54 218.4 267 48.3
FAN28G2978 Fragaria x ananassa HOM05D004687 ORTHO05D006002 3.3e-54 217.2 268 48.5
FAN19G0767 Fragaria x ananassa HOM05D004687 ORTHO05D006002 4.3e-54 216.9 267 47.9
FAN26G2006 Fragaria x ananassa HOM05D004687 ORTHO05D006002 2.0e-51 208.0 268 47.8
FAN03G2011 Fragaria x ananassa HOM05D004687 ORTHO05D006002 2.4e-49 201.1 421 37.1
SMO147G0044 Selaginella moellendorffii HOM05D004687 ORTHO05D006002 1.5e-46 191.8 305 39.0
CDE11G0743 Ceratophyllum demersum HOM05D002440 ORTHO05D002576 4.8e-45 186.8 426 37.6
Potri.002G164000 Populus trichocarpa HOM05D004687 ORTHO05D006002 1.2e-43 182.2 288 43.8
vmacro13233 Vaccinium macrocarpon HOM05D004687 ORTHO05D006002 3.3e-38 164.1 153 54.2
GSVIVG01013521001 Vitis vinifera HOM05D004687 ORTHO05D006002 6.3e-37 159.8 116 68.1
FAN23G1626 Fragaria x ananassa HOM05D004687 ORTHO05D006002 5.0e-34 150.2 281 38.4
SHI13366 Sapria himalayana HOM05D004687 ORTHO05D006002 2.1e-32 144.8 163 48.5
QL06p033484 Quercus lobata HOM05D004687 ORTHO05D006002 1.8e-31 141.7 124 54.0
SHI13367 Sapria himalayana HOM05D004687 ORTHO05D006002 1.8e-31 141.7 428 30.8
Lalb_Chr17g0339031 Lupinus albus HOM05D004687 ORTHO05D006002 3.3e-30 137.5 363 33.1
Actinidia20138 Actinidia chinensis HOM05D004687 ORTHO05D006002 7.4e-30 136.3 110 58.2
CBR_g45680 Chara braunii HOM05D004687 ORTHO05D006002 7.4e-30 136.3 298 29.2
Actinidia10067 Actinidia chinensis HOM05D004687 ORTHO05D006002 9.7e-30 136.0 398 33.2
MD01G1071100 Malus domestica HOM05D004687 ORTHO05D006002 2.8e-29 134.4 99 65.7
Aa31sc194G60 Aethionema arabicum HOM05D004687 ORTHO05D006002 1.2e-27 129.0 134 56.7
COL.COLO4_21921 Corchorus olitorius HOM05D004687 ORTHO05D006002 4.8e-21 107.1 105 49.5
SGA_v2.0_scaffold95G28808 Striga asiatica HOM05D005821 ORTHO05D006649 1.1e-20 105.9 100 58.0
ATR0804G028 Amborella trichopoda HOM05D004687 ORTHO05D006002 1.3e-18 99.0 130 46.9
Mapoly0091s0017 Marchantia polymorpha HOM05D004687 ORTHO05D006002 7.2e-17 93.2 285 27.0
PSO541G1518 Papaver somniferum HOM05D004687 ORTHO05D006002 1.2e-16 92.4 161 37.3
Ca_03421_v3 Cicer arietinum L. HOM05D004687 ORTHO05D006002 2.0e-11 75.1 125 42.4
AT4G01245 Arabidopsis thaliana HOM05D004687 ORTHO05D006002 1.4e-07 62.4 60 58.3
BraA03t10099Z Brassica rapa HOM05D004687 ORTHO05D016135 8.8e-07 59.7 70 50.0
A03p47890 Brassica napus HOM05D004687 ORTHO05D016135 1.1e-06 59.3 70 50.0
BraA03t13898Z Brassica rapa HOM05D004687 ORTHO05D016135 3.3e-06 57.8 70 50.0


User provided reference genes

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