Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000915g0130 Nicotiana tabacum HOM05D006382 ORTHO05D008938 3.0e-309 1064.3 516 100.0
Nitab4.5_0010695g0050 Nicotiana tabacum HOM05D006382 ORTHO05D008938 2.9e-280 968.0 534 89.7
Sopen01g038910 Solanum pennellii HOM05D006382 ORTHO05D008938 5.1e-269 930.6 518 88.8
Solyc01g095120.3 Solanum lycopersicum HOM05D006382 ORTHO05D008938 3.3e-268 927.9 518 88.4
PGSC0003DMG400000065 Solanum tuberosum HOM05D006382 ORTHO05D008938 9.6e-268 926.4 518 88.0
Peaxi162Scf00020g01516 Petunia axillaris HOM05D006382 ORTHO05D008938 8.1e-267 923.3 515 88.0
Dinv43864 Davidia involucrata HOM05D006382 ORTHO05D008938 5.7e-228 794.3 513 75.6
Gohir.A11G092400 Gossypium hirsutum HOM05D006382 ORTHO05D008938 1.3e-227 793.1 511 74.2
Duzib133G1372 Durio zibethinus HOM05D006382 ORTHO05D008938 1.7e-227 792.7 519 72.1
TWI59G0052 Tripterygium wilfordii HOM05D006382 ORTHO05D008938 2.2e-227 792.3 470 78.3
MSTRG.17299 Avicennia marina HOM05D006382 ORTHO05D008938 8.2e-227 790.4 522 74.1
Gorai.007G103500 Gossypium raimondii HOM05D006382 ORTHO05D008938 1.4e-226 789.6 513 73.9
Potri.002G164700 Populus trichocarpa HOM05D006382 ORTHO05D008938 2.0e-225 785.8 455 79.3
Thecc.01G352300 Theobroma cacao HOM05D006382 ORTHO05D008938 2.6e-225 785.4 521 73.1
Prupe.2G177700 Prunus persica HOM05D006382 ORTHO05D008938 2.2e-224 782.3 518 71.8
GSVIVG01026968001 Vitis vinifera HOM05D006382 ORTHO05D008938 5.0e-224 781.2 517 74.7
Actinidia20164 Actinidia chinensis HOM05D006382 ORTHO05D008938 6.5e-224 780.8 514 73.7
CSS0031254 Camellia sinensis var. sinensis HOM05D006382 ORTHO05D008938 7.2e-223 777.3 523 72.5
Oeu063675.1 Olea europaea HOM05D006382 ORTHO05D008938 7.2e-223 777.3 519 73.2
Hma1.2p1_0335F.1_g128860 Hydrangea macrophylla HOM05D006382 ORTHO05D008938 1.2e-222 776.5 460 78.9
Cfa003871 Carpinus fangiana HOM05D006382 ORTHO05D008938 1.4e-221 773.1 506 72.7
Carub.0005s2823 Capsella rubella HOM05D006382 ORTHO05D008938 2.6e-220 768.8 468 75.9
MD01G1071500 Malus domestica HOM05D006382 ORTHO05D008938 2.6e-220 768.8 522 71.1
Rhsim07G0010300 Rhododendron simsii HOM05D006382 ORTHO05D008938 2.6e-220 768.8 508 72.8
Cpa.g.sc11.72 Carica papaya HOM05D006382 ORTHO05D008938 4.4e-220 768.1 513 72.3
SGA_v2.0_scaffold4G02278 Striga asiatica HOM05D006382 ORTHO05D008938 5.7e-220 767.7 519 72.1
Eucgr.D02325 Eucalyptus grandis HOM05D006382 ORTHO05D008938 7.5e-220 767.3 519 71.5
THA.LOC104827604 Tarenaya hassleriana HOM05D006382 ORTHO05D008938 7.5e-220 767.3 468 76.3
Sabra02G0146800 Salix brachista HOM05D006382 ORTHO05D008938 2.8e-219 765.4 455 77.6
FAN01G1899 Fragaria x ananassa HOM05D006382 ORTHO05D008938 3.7e-219 765.0 494 71.9
Lj1g0001840 Lotus japonicus HOM05D006382 ORTHO05D008938 3.7e-219 765.0 492 72.0
Sed0009049 Sechium edule HOM05D006382 ORTHO05D008938 4.8e-219 764.6 509 72.5
CSS0000318 Camellia sinensis var. sinensis HOM05D006382 ORTHO05D008938 1.1e-218 763.5 516 72.9
SalBow3G4256 Salvia bowleyana HOM05D006382 ORTHO05D008938 1.1e-218 763.5 529 69.9
Sp5g01870 Schrenkiella parvula HOM05D006382 ORTHO05D008938 1.4e-218 763.1 503 72.4
AL5G43900 Arabidopsis lyrata HOM05D006382 ORTHO05D008938 1.8e-218 762.7 468 74.8
Thhalv10005890m.g Eutrema salsugineum HOM05D006382 ORTHO05D008938 1.8e-218 762.7 472 75.0
vmacro13226 Vaccinium macrocarpon HOM05D006382 ORTHO05D008938 1.8e-218 762.7 535 70.5
Lalb_Chr19g0126881 Lupinus albus HOM05D006382 ORTHO05D008938 3.1e-218 761.9 524 70.2
QL04p055600 Quercus lobata HOM05D006382 ORTHO05D008938 3.1e-218 761.9 492 73.6
RcHm_v2.0_Chr1g0357731 Rosa chinensis HOM05D006382 ORTHO05D008938 3.1e-218 761.9 519 70.7
CARHR171860 Cardamine hirsuta HOM05D006382 ORTHO05D008938 9.1e-218 760.4 468 75.4
FvH4_7g15410 Fragaria vesca HOM05D006382 ORTHO05D008938 9.1e-218 760.4 511 70.1
CiPaw.01G067600 Carya illinoinensis HOM05D006382 ORTHO05D008938 1.2e-217 760.0 455 77.1
MELO3C006077.2 Cucumis melo HOM05D006382 ORTHO05D008938 2.0e-217 759.2 517 71.4
ClCG05G001220 Citrullus lanatus HOM05D006382 ORTHO05D008938 3.5e-217 758.4 510 72.7
Atru.chr5.564 Acer truncatum HOM05D006382 ORTHO05D008938 7.7e-217 757.3 474 75.7
AT3G61540 Arabidopsis thaliana HOM05D006382 ORTHO05D008938 3.8e-216 755.0 468 75.6
Phvul.008G058200 Phaseolus vulgaris HOM05D006382 ORTHO05D008938 8.5e-216 753.8 512 70.7
Medtr7g079030 Medicago truncatula HOM05D006382 ORTHO05D008938 1.1e-215 753.4 512 71.5
BcaC08g45134 Brassica carinata HOM05D006382 ORTHO05D008938 1.5e-215 753.1 517 70.6
C06p27550 Brassica napus HOM05D006382 ORTHO05D008938 3.2e-215 751.9 517 70.8
Lj9C589T7 Lonicera japonica HOM05D006382 ORTHO05D008938 7.2e-215 750.7 507 71.4
VMungo1383G3370 Vigna mungo HOM05D006382 ORTHO05D008938 7.2e-215 750.7 505 70.5
BolC6t37923H Brassica oleracea HOM05D006382 ORTHO05D008938 1.2e-214 750.0 517 70.6
CsaV3_3G008570 Cucumis sativus L. HOM05D006382 ORTHO05D008938 2.7e-214 748.8 507 70.6
Ciclev10019743m.g Citrus clementina HOM05D006382 ORTHO05D008938 3.6e-214 748.4 512 71.7
A07p25560 Brassica napus HOM05D006382 ORTHO05D008938 6.1e-214 747.7 518 70.1
BraA07t30197Z Brassica rapa HOM05D006382 ORTHO05D008938 1.0e-213 746.9 518 69.7
BcaB02g07372 Brassica carinata HOM05D006382 ORTHO05D008938 1.4e-213 746.5 523 69.8
Aqoxy7G00230 Aquilegia oxysepala HOM05D006382 ORTHO05D008938 5.2e-213 744.6 454 76.7
Glyma.09G254600 Glycine max HOM05D006382 ORTHO05D008938 1.2e-212 743.4 522 68.6
Glyma.18G238400 Glycine max HOM05D006382 ORTHO05D008938 1.5e-212 743.0 510 70.2
FAN06G2792 Fragaria x ananassa HOM05D006382 ORTHO05D008938 3.4e-212 741.9 540 65.9
HanXRQChr17g0562131 Helianthus annuus HOM05D006382 ORTHO05D008938 3.4e-212 741.9 500 69.8
Nn1g01689 Nelumbo nucifera HOM05D006382 ORTHO05D008938 3.4e-212 741.9 458 74.9
Actinidia10076 Actinidia chinensis HOM05D006382 ORTHO05D008938 5.7e-212 741.1 497 74.2
PSO266G0056 Papaver somniferum HOM05D006382 ORTHO05D008938 4.8e-211 738.0 491 73.1
arahy.Tifrunner.gnm1.ann1.FF5BCH Arachis hypogaea HOM05D006382 ORTHO05D008938 1.8e-210 736.1 483 72.5
arahy.Tifrunner.gnm1.ann1.Z348XU Arachis hypogaea HOM05D006382 ORTHO05D008938 2.4e-210 735.7 483 72.5
EL10Ac1g00353 Beta vulgaris HOM05D006382 ORTHO05D008938 2.4e-210 735.7 461 74.0
PSO384G0256 Papaver somniferum HOM05D006382 ORTHO05D008938 2.4e-210 735.7 474 73.6
Psat3g105480 Pisum sativum HOM05D006382 ORTHO05D008938 4.1e-210 734.9 512 68.9
CANSAT56G1207 Cannabis sativa HOM05D006382 ORTHO05D008938 1.2e-209 733.4 513 69.4
DCAR_005361 Daucus carota HOM05D006382 ORTHO05D008938 3.5e-209 731.9 491 70.1
FAN03G1976 Fragaria x ananassa HOM05D006382 ORTHO05D008938 3.5e-209 731.9 486 70.2
Atru.BG.55.p Acer truncatum HOM05D006382 ORTHO05D008938 5.9e-209 731.1 452 76.3
TPR.G35789 Trifolium pratense HOM05D006382 ORTHO05D008938 1.7e-208 729.6 495 70.7
ECA234G1133 Erigeron canadensis HOM05D006382 ORTHO05D008938 3.8e-208 728.4 452 73.9
Ca_07943_v3 Cicer arietinum L. HOM05D006382 ORTHO05D008938 1.5e-207 726.5 443 75.4
Sc01g0003200 Simmondsia chinensis HOM05D006382 ORTHO05D008938 1.9e-207 726.1 500 68.6
Haze_15566 Corylus avellana HOM05D006382 ORTHO05D008938 2.5e-207 725.7 497 70.4
Cc02_g38570 Coffea canephora HOM05D006382 ORTHO05D008938 4.2e-207 724.9 525 67.6
AUR62004414 Chenopodium quinoa HOM05D006382 ORTHO05D008938 3.0e-205 718.8 498 68.1
MBI06_g33533_MAGBIO Magnolia biondii HOM05D006382 ORTHO05D008938 2.0e-204 716.1 452 73.7
HPP92_008800 Vanilla planifolia HOM05D006382 ORTHO05D008938 7.5e-204 714.1 471 69.0
FAN06G0271 Fragaria x ananassa HOM05D006382 ORTHO05D008938 1.3e-203 713.4 462 72.3
ATR0721G029 Amborella trichopoda HOM05D006382 ORTHO05D008938 9.2e-202 707.2 452 73.7
CDE10G0280 Ceratophyllum demersum HOM05D006382 ORTHO05D008938 8.6e-200 700.7 492 67.1
CAN.G78.131 Capsicum annuum HOM05D006382 ORTHO05D008938 1.2e-198 696.8 366 91.8
Lsat_1_v5_gn_4_35160 Lactuca sativa HOM05D006382 ORTHO05D008938 1.4e-197 693.3 522 65.1
Aa31LG10G15440 Aethionema arabicum HOM05D006382 ORTHO05D008938 3.1e-189 665.6 412 74.3
CANSAT56G3955 Cannabis sativa HOM05D006382 ORTHO05D008938 1.7e-187 659.8 457 68.5
unitig_747.g21323 Utricularia gibba HOM05D000887 ORTHO05D000908 7.8e-185 651.0 516 64.3
COL.COLO4_12779 Corchorus olitorius HOM05D006382 ORTHO05D008938 8.6e-184 647.5 466 68.5
Pp3c20_22770 Physcomitrium patens HOM05D006382 ORTHO05D008938 6.2e-182 641.3 484 62.0
Mapoly0179s0013 Marchantia polymorpha HOM05D006382 ORTHO05D008938 1.6e-177 626.7 478 61.3
Migut.B01800 Erythranthe guttata HOM05D006382 ORTHO05D008938 6.6e-176 621.3 513 61.6
AUR62022620 Chenopodium quinoa HOM05D006382 ORTHO05D008938 7.3e-175 617.8 491 61.3
SMO134G0292 Selaginella moellendorffii HOM05D006382 ORTHO05D008938 3.6e-174 615.5 446 63.9
Gohir.D11G097200 Gossypium hirsutum HOM05D006382 ORTHO05D008938 6.2e-174 614.8 416 70.4
Ah.05g180140 Amaranthus hybridus HOM05D006382 ORTHO05D008938 3.4e-172 609.0 474 62.9
Manes.05G029200 Manihot esculenta HOM05D006382 ORTHO05D008938 9.9e-164 580.9 411 70.8
Oeu063676.1 Olea europaea HOM05D006382 ORTHO05D008938 2.7e-137 493.0 485 55.5
TAR629G1903 Trochodendron aralioides HOM05D006382 ORTHO05D008938 9.7e-135 484.6 358 65.1
Cre03.g193700 Chlamydomonas reinhardtii HOM05D006382 ORTHO05D008938 8.2e-126 454.9 452 50.0
Potri.014G090601 Populus trichocarpa HOM05D006382 ORTHO05D008938 1.1e-125 454.5 317 70.3
MCO14G065 Micromonas commoda HOM05D006382 ORTHO05D008938 4.1e-117 426.0 475 47.6
Zm00001eb375690 Zea mays HOM05D006382 ORTHO05D008938 6.3e-110 402.1 279 69.2
PRCOL_00004635 Prasinoderma coloniale HOM05D006382 ORTHO05D008938 1.8e-101 374.0 464 45.5
Cfa025852 Carpinus fangiana HOM05D006382 ORTHO05D008938 5.6e-82 309.3 450 40.4
Os06g0163600 Oryza sativa ssp. japonica HOM05D006382 ORTHO05D008938 4.5e-39 166.8 100 74.0
SMO139G0016 Selaginella moellendorffii HOM05D006382 ORTHO05D376983 1.7e-38 164.9 226 40.3
Hma1.2p1_0036F.1_g022810 Hydrangea macrophylla HOM05D006382 ORTHO05D228417 5.3e-32 143.3 96 69.8
Hma1.2p1_0036F.1_g022815 Hydrangea macrophylla HOM05D006382 ORTHO05D228242 5.3e-32 143.3 96 69.8
Hma1.2p1_0515F.1_g170355 Hydrangea macrophylla HOM05D006382 ORTHO05D228454 5.3e-32 143.3 96 69.8
Hma1.2p1_1019F.1_g248455 Hydrangea macrophylla HOM05D006382 ORTHO05D228422 5.3e-32 143.3 96 69.8
SMO165G0168 Selaginella moellendorffii HOM05D006382 ORTHO05D374182 2.3e-27 127.9 280 34.3
BolC4t24936H Brassica oleracea HOM05D006382 ORTHO05D024383 2.9e-22 110.9 78 62.8
C04p33670 Brassica napus HOM05D006382 ORTHO05D024383 1.8e-16 91.7 57 71.9
BcaB04g18088 Brassica carinata HOM05D006382 ORTHO05D024383 3.2e-13 80.9 43 90.7
Ah.05g180150 Amaranthus hybridus HOM05D006382 ORTHO05D060446 2.4e-08 64.7 83 44.6
Actinidia17930 Actinidia chinensis HOM05D006382 ORTHO05D008938 5.3e-08 63.5 41 78.0
CsaV3_3G008600 Cucumis sativus L. HOM05D006382 ORTHO05D172594 5.9e-07 60.1 40 62.5


User provided reference genes

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