Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000915g0080 Nicotiana tabacum HOM05D003118 ORTHO05D003618 5.7e-161 570.9 288 100.0
Solyc01g095130.4 Solanum lycopersicum HOM05D003118 ORTHO05D003618 7.1e-103 377.9 302 67.9
Peaxi162Scf00020g01526 Petunia axillaris HOM05D003118 ORTHO05D003618 7.6e-97 357.8 265 71.3
Sopen01g038920 Solanum pennellii HOM05D003118 ORTHO05D003618 5.5e-95 351.7 350 56.9
Nitab4.5_0010695g0020 Nicotiana tabacum HOM05D003118 ORTHO05D003618 1.9e-84 316.6 216 79.6
Cfa003868 Carpinus fangiana HOM05D003118 ORTHO05D003618 2.4e-58 229.9 299 42.1
GSVIVG01026973001 Vitis vinifera HOM05D003118 ORTHO05D003618 5.9e-57 225.3 297 43.8
GSVIVG01026971001 Vitis vinifera HOM05D003118 ORTHO05D003618 3.8e-56 222.6 300 41.7
PGSC0003DMG400000196 Solanum tuberosum HOM05D003118 ORTHO05D003618 5.5e-55 218.8 256 52.3
Haze_15568 Corylus avellana HOM05D003118 ORTHO05D003618 7.2e-55 218.4 320 39.7
CiPaw.01G067900 Carya illinoinensis HOM05D003118 ORTHO05D003618 4.7e-54 215.7 312 40.4
QL04p055623 Quercus lobata HOM05D003118 ORTHO05D003618 4.0e-53 212.6 295 42.4
TAR375G0293 Trochodendron aralioides HOM05D003118 ORTHO05D003618 6.7e-53 211.8 279 43.4
TAR629G1012 Trochodendron aralioides HOM05D003118 ORTHO05D003618 8.2e-51 204.9 316 39.6
Dinv37591 Davidia involucrata HOM05D003118 ORTHO05D003618 5.3e-50 202.2 292 40.4
GSVIVG01019423001 Vitis vinifera HOM05D003118 ORTHO05D003618 7.0e-50 201.8 309 40.1
FAN04G2118 Fragaria x ananassa HOM05D003118 ORTHO05D003618 9.1e-50 201.4 280 42.5
FAN04G2035 Fragaria x ananassa HOM05D003118 ORTHO05D003618 1.6e-49 200.7 279 42.7
Cc02_g38610 Coffea canephora HOM05D003118 ORTHO05D003618 2.2e-48 196.8 310 39.4
Prupe.5G107000 Prunus persica HOM05D003118 ORTHO05D003618 8.5e-48 194.9 292 40.1
FvH4_5g03250 Fragaria vesca HOM05D003118 ORTHO05D003618 4.2e-47 192.6 292 40.1
FAN13G0863 Fragaria x ananassa HOM05D003118 ORTHO05D003618 7.2e-47 191.8 292 39.7
Manes.02G016600 Manihot esculenta HOM05D003118 ORTHO05D003618 9.4e-47 191.4 309 39.5
CSS0022485 Camellia sinensis var. sinensis HOM05D003118 ORTHO05D003618 1.2e-46 191.0 292 38.7
FAN08G3653 Fragaria x ananassa HOM05D003118 ORTHO05D003618 1.2e-46 191.0 292 40.1
Cfa012251 Carpinus fangiana HOM05D003118 ORTHO05D003618 2.1e-46 190.3 265 42.3
RcHm_v2.0_Chr7g0196521 Rosa chinensis HOM05D003118 ORTHO05D003618 2.1e-46 190.3 290 37.9
MD14G1112600 Malus domestica HOM05D003118 ORTHO05D003618 3.6e-46 189.5 302 37.7
QL02p033293 Quercus lobata HOM05D003118 ORTHO05D003618 4.7e-46 189.1 301 38.5
Dinv38896 Davidia involucrata HOM05D003118 ORTHO05D003618 8.0e-46 188.3 300 39.0
Potri.003G133000 Populus trichocarpa HOM05D003118 ORTHO05D003618 8.0e-46 188.3 295 40.0
Duzib205G0707 Durio zibethinus HOM05D003118 ORTHO05D003618 3.0e-45 186.4 309 40.1
PSO384G4267 Papaver somniferum HOM05D003118 ORTHO05D003618 4.0e-45 186.0 291 37.5
SalBow8G1076 Salvia bowleyana HOM05D003118 ORTHO05D003618 1.2e-44 184.5 304 35.2
Aqoxy7G00197 Aquilegia oxysepala HOM05D003118 ORTHO05D003618 1.5e-44 184.1 290 36.6
PSO266G0031 Papaver somniferum HOM05D003118 ORTHO05D003618 1.5e-44 184.1 292 38.0
TWI14G1154 Tripterygium wilfordii HOM05D003118 ORTHO05D003618 2.0e-44 183.7 292 37.0
DCAR_004609 Daucus carota HOM05D003118 ORTHO05D003618 2.6e-44 183.3 316 37.0
Actinidia28342 Actinidia chinensis HOM05D003118 ORTHO05D003618 3.4e-44 183.0 292 39.4
Sabra03G0095300 Salix brachista HOM05D003118 ORTHO05D003618 9.8e-44 181.4 307 37.8
Thecc.03G287000 Theobroma cacao HOM05D003118 ORTHO05D003618 9.8e-44 181.4 304 38.8
MD06G1091800 Malus domestica HOM05D003118 ORTHO05D003618 1.7e-43 180.6 292 38.0
Glyma.01G222500 Glycine max HOM05D003118 ORTHO05D003618 2.2e-43 180.3 284 36.6
MSTRG.13862 Avicennia marina HOM05D003118 ORTHO05D003618 2.8e-43 179.9 292 37.7
Ca_24533_v3 Cicer arietinum L. HOM05D003118 ORTHO05D003618 2.8e-43 179.9 288 35.1
Gohir.D08G134400 Gossypium hirsutum HOM05D003118 ORTHO05D003618 2.8e-43 179.9 306 38.2
Gorai.004G137500 Gossypium raimondii HOM05D003118 ORTHO05D003618 6.3e-43 178.7 307 37.8
PSO170G3062 Papaver somniferum HOM05D003118 ORTHO05D003618 6.3e-43 178.7 287 38.0
DCAR_025216 Daucus carota HOM05D003118 ORTHO05D003618 1.1e-42 177.9 323 34.7
Gohir.A08G114000 Gossypium hirsutum HOM05D003118 ORTHO05D003618 1.1e-42 177.9 307 37.8
TWI81G0015 Tripterygium wilfordii HOM05D003118 ORTHO05D003618 1.1e-42 177.9 292 38.0
Atru.chr9.2107 Acer truncatum HOM05D003118 ORTHO05D003618 1.4e-42 177.6 295 37.6
Glyma.11G020900 Glycine max HOM05D003118 ORTHO05D003618 1.8e-42 177.2 304 35.2
PSO063G6388 Papaver somniferum HOM05D003118 ORTHO05D003618 3.1e-42 176.4 287 37.6
Eucgr.E00782 Eucalyptus grandis HOM05D003118 ORTHO05D003618 4.1e-42 176.0 266 39.8
MBI07_g11721_MAGBIO Magnolia biondii HOM05D003118 ORTHO05D003618 5.4e-42 175.6 269 38.3
Rhsim02G0236100 Rhododendron simsii HOM05D003118 ORTHO05D003618 5.4e-42 175.6 290 37.9
CiPaw.11G129400 Carya illinoinensis HOM05D003118 ORTHO05D003618 9.1e-42 174.9 292 37.3
Hma1.2p1_0216F.1_g091120 Hydrangea macrophylla HOM05D003118 ORTHO05D003618 9.1e-42 174.9 293 38.6
Psat2g183920 Pisum sativum HOM05D003118 ORTHO05D003618 1.2e-41 174.5 290 34.1
Aa31LG9G490 Aethionema arabicum HOM05D003118 ORTHO05D003618 2.7e-41 173.3 308 34.4
TPR.G6616 Trifolium pratense HOM05D003118 ORTHO05D003618 2.7e-41 173.3 290 33.8
VMungo1215G2430 Vigna mungo HOM05D003118 ORTHO05D003618 2.7e-41 173.3 304 34.9
THA.LOC104823601 Tarenaya hassleriana HOM05D003118 ORTHO05D003618 5.9e-41 172.2 309 35.3
CANSAT21G1093 Cannabis sativa HOM05D003118 ORTHO05D003618 7.7e-41 171.8 273 37.4
Migut.E01210 Erythranthe guttata HOM05D003118 ORTHO05D003618 1.0e-40 171.4 299 34.1
BcaC08g44538 Brassica carinata HOM05D003118 ORTHO05D003618 2.2e-40 170.2 309 34.0
A07p20860 Brassica napus HOM05D003118 ORTHO05D003618 2.2e-40 170.2 309 34.0
C06p20020 Brassica napus HOM05D003118 ORTHO05D003618 2.2e-40 170.2 309 34.0
BraA07t29773Z Brassica rapa HOM05D003118 ORTHO05D003618 2.2e-40 170.2 309 34.0
THA.LOC104809363 Tarenaya hassleriana HOM05D003118 ORTHO05D003618 2.2e-40 170.2 296 35.1
PSO266G0003 Papaver somniferum HOM05D003118 ORTHO05D003618 2.9e-40 169.9 274 38.3
BcaB02g07884 Brassica carinata HOM05D003118 ORTHO05D003618 3.8e-40 169.5 309 34.6
Lsat_1_v5_gn_6_84940 Lactuca sativa HOM05D003118 ORTHO05D003618 3.8e-40 169.5 291 35.1
vmacro11412 Vaccinium macrocarpon HOM05D003118 ORTHO05D003618 5.0e-40 169.1 230 41.7
Haze_08750 Corylus avellana HOM05D003118 ORTHO05D003618 6.5e-40 168.7 258 40.3
Cc08_g15310 Coffea canephora HOM05D003118 ORTHO05D003618 1.1e-39 167.9 310 36.1
Oeu042365.1 Olea europaea HOM05D003118 ORTHO05D003618 1.5e-39 167.5 292 34.9
Nn6g32462 Nelumbo nucifera HOM05D003118 ORTHO05D003618 1.9e-39 167.2 289 35.6
Lsat_1_v5_gn_3_11501 Lactuca sativa HOM05D003118 ORTHO05D003618 2.5e-39 166.8 332 36.1
Hund11431 Selenicereus undatus HOM05D003118 ORTHO05D003618 2.5e-39 166.8 297 34.7
Medtr5g009920 Medicago truncatula HOM05D003118 ORTHO05D003618 4.2e-39 166.0 288 33.3
Ciclev10024541m.g Citrus clementina HOM05D003118 ORTHO05D003618 5.5e-39 165.6 269 40.1
Ah.12g052020 Amaranthus hybridus HOM05D003118 ORTHO05D003618 7.2e-39 165.2 278 38.5
Thhalv10027658m.g Eutrema salsugineum HOM05D003118 ORTHO05D003618 7.2e-39 165.2 309 34.6
Phvul.002G160400 Phaseolus vulgaris HOM05D003118 ORTHO05D003618 7.2e-39 165.2 285 34.0
AUR62019759 Chenopodium quinoa HOM05D003118 ORTHO05D003618 2.1e-38 163.7 265 38.1
Sp7g00460 Schrenkiella parvula HOM05D003118 ORTHO05D003618 2.1e-38 163.7 307 35.2
CANSAT21G0202 Cannabis sativa HOM05D003118 ORTHO05D003618 2.8e-38 163.3 312 33.3
ECA246G2781 Erigeron canadensis HOM05D003118 ORTHO05D003618 2.8e-38 163.3 275 40.0
SGA_v2.0_scaffold144G35901 Striga asiatica HOM05D003118 ORTHO05D003618 3.6e-38 162.9 292 33.6
HanXRQChr06g0166221 Helianthus annuus HOM05D003118 ORTHO05D003618 6.1e-38 162.2 275 38.9
SGA_v2.0_scaffold173G39132 Striga asiatica HOM05D003118 ORTHO05D003618 6.1e-38 162.2 291 35.4
Lalb_Chr09g0320801 Lupinus albus HOM05D003118 ORTHO05D003618 8.0e-38 161.8 290 33.8
HanXRQChr17g0533861 Helianthus annuus HOM05D003118 ORTHO05D003618 1.4e-37 161.0 300 35.7
PGR042G1679 Punica granatum HOM05D003118 ORTHO05D003618 1.4e-37 161.0 315 35.6
BolC6t37186H Brassica oleracea HOM05D003118 ORTHO05D003618 2.3e-37 160.2 325 32.3
LjContig00312_ERROPOS870357g0013212 Lotus japonicus HOM05D003118 ORTHO05D003618 4.0e-37 159.5 266 34.2
Lsat_1_v5_gn_7_2680 Lactuca sativa HOM05D003118 ORTHO05D003618 5.2e-37 159.1 309 35.0
BraA04t17109Z Brassica rapa HOM05D003118 ORTHO05D003618 8.8e-37 158.3 310 32.9
AL7G47820 Arabidopsis lyrata HOM05D003118 ORTHO05D003618 1.2e-36 157.9 291 33.7
A04p14690 Brassica napus HOM05D003118 ORTHO05D003618 1.2e-36 157.9 310 32.6
Carub.0007s3389 Capsella rubella HOM05D003118 ORTHO05D003618 1.2e-36 157.9 309 33.7
BcaC02g08950 Brassica carinata HOM05D003118 ORTHO05D003618 1.5e-36 157.5 310 32.9
C04p48560 Brassica napus HOM05D003118 ORTHO05D003618 1.5e-36 157.5 310 32.9
BolC4t26449H Brassica oleracea HOM05D003118 ORTHO05D003618 1.5e-36 157.5 310 32.9
CsaV3_5G002370 Cucumis sativus L. HOM05D003118 ORTHO05D003618 2.0e-36 157.1 268 36.6
CARHR287630 Cardamine hirsuta HOM05D003118 ORTHO05D003618 2.6e-36 156.8 288 34.0
SHI07074 Sapria himalayana HOM05D003118 ORTHO05D003618 2.6e-36 156.8 302 34.4
BcaB06g27629 Brassica carinata HOM05D003118 ORTHO05D003618 3.4e-36 156.4 316 32.6
AT5G41580 Arabidopsis thaliana HOM05D003118 ORTHO05D003618 4.4e-36 156.0 291 33.7
ECA240G3271 Erigeron canadensis HOM05D000115 ORTHO05D003618 9.8e-36 154.8 302 33.8
Peaxi162Scf00102g01644 Petunia axillaris HOM05D003118 ORTHO05D003618 1.3e-35 154.5 292 33.6
HanXRQChr04g0120811 Helianthus annuus HOM05D003118 ORTHO05D003618 2.2e-35 153.7 292 33.6
Nitab4.5_0005339g0020 Nicotiana tabacum HOM05D003118 ORTHO05D003618 3.7e-35 152.9 293 34.8
arahy.Tifrunner.gnm1.ann1.78DXCF Arachis hypogaea HOM05D003118 ORTHO05D003618 1.8e-34 150.6 304 29.6
CDE10G1109 Ceratophyllum demersum HOM05D003118 ORTHO05D003618 1.8e-34 150.6 290 31.4
LjContig00312_ERROPOS870357g0002156 Lotus japonicus HOM05D003118 ORTHO05D003618 1.8e-34 150.6 268 34.7
Sopen08g003990 Solanum pennellii HOM05D003118 ORTHO05D003618 2.4e-34 150.2 267 34.5
Sed0011553 Sechium edule HOM05D003118 ORTHO05D003618 4.1e-34 149.4 289 34.3
Solyc08g008130.4 Solanum lycopersicum HOM05D003118 ORTHO05D003618 4.1e-34 149.4 292 33.6
Sed0003885 Sechium edule HOM05D003118 ORTHO05D003618 7.0e-34 148.7 279 34.1
COL.COLO4_08355 Corchorus olitorius HOM05D003118 ORTHO05D003618 1.6e-33 147.5 299 34.8
DCAR_000636 Daucus carota HOM05D003118 ORTHO05D003618 1.6e-33 147.5 257 34.2
HPP92_002884 Vanilla planifolia HOM05D003118 ORTHO05D003618 4.5e-33 146.0 286 36.4
AUR62010758 Chenopodium quinoa HOM05D003118 ORTHO05D003618 7.8e-33 145.2 268 35.1
HanXRQChr13g0416081 Helianthus annuus HOM05D003118 ORTHO05D003618 1.0e-32 144.8 298 32.6
HPP92_002895 Vanilla planifolia HOM05D003118 ORTHO05D003618 1.0e-32 144.8 286 36.0
TPR.G24280 Trifolium pratense HOM05D003118 ORTHO05D003618 1.7e-32 144.1 295 30.2
HPP92_000528 Vanilla planifolia HOM05D003118 ORTHO05D003618 2.9e-32 143.3 303 31.4
Zm00001eb375680 Zea mays HOM05D003118 ORTHO05D003618 5.0e-32 142.5 283 27.9
Nitab4.5_0010695g0030 Nicotiana tabacum HOM05D003118 ORTHO05D003618 1.5e-31 141.0 82 86.6
CiPaw.12G088800 Carya illinoinensis HOM05D003118 ORTHO05D003618 2.1e-30 137.1 334 29.3
arahy.Tifrunner.gnm1.ann1.9S2WM4 Arachis hypogaea HOM05D003118 ORTHO05D003618 2.8e-30 136.7 304 28.3
SEGI_33305 Sequoiadendron giganteum HOM05D003118 ORTHO05D003618 1.4e-29 134.4 227 35.7
Os06g0164000 Oryza sativa ssp. japonica HOM05D003118 ORTHO05D003618 1.8e-29 134.0 261 30.3
ClCG01G002310 Citrullus lanatus HOM05D003118 ORTHO05D003618 8.9e-29 131.7 228 35.5
Nitab4.5_0002231g0040 Nicotiana tabacum HOM05D003118 ORTHO05D003618 8.9e-29 131.7 261 33.0
ECA236G1529 Erigeron canadensis HOM05D003118 ORTHO05D003618 2.0e-28 130.6 302 30.1
EL10Ac5g12842 Beta vulgaris HOM05D003118 ORTHO05D003618 4.4e-28 129.4 228 37.3
A08p34920 Brassica napus HOM05D003118 ORTHO05D003618 8.3e-27 125.2 284 32.0
BraA08t35403Z Brassica rapa HOM05D003118 ORTHO05D003618 2.4e-26 123.6 268 32.1
AagrBONN_evm.TU.Sc2ySwM_228.3604 Anthoceros agrestis HOM05D003118 ORTHO05D003618 1.2e-25 121.3 265 30.9
BcaB03g13535 Brassica carinata HOM05D003118 ORTHO05D003618 1.2e-25 121.3 267 31.5
C08p12330 Brassica napus HOM05D003118 ORTHO05D003618 2.7e-25 120.2 268 31.3
CARHR008810 Cardamine hirsuta HOM05D003118 ORTHO05D003618 3.5e-25 119.8 269 32.0
C08p49770 Brassica napus HOM05D003118 ORTHO05D003618 5.9e-25 119.0 266 30.5
BolC8t48874H Brassica oleracea HOM05D003118 ORTHO05D003618 1.0e-24 118.2 268 31.3
AL1G19340 Arabidopsis lyrata HOM05D003118 ORTHO05D003618 1.3e-24 117.9 267 29.2
AT1G08910 Arabidopsis thaliana HOM05D003118 ORTHO05D003618 1.7e-24 117.5 267 30.0
Aa31sc17G150 Aethionema arabicum HOM05D003118 ORTHO05D003618 5.0e-24 115.9 271 32.5
Carub.0001s0824 Capsella rubella HOM05D003118 ORTHO05D003618 5.0e-24 115.9 268 29.5
FAN18G4078 Fragaria x ananassa HOM05D003118 ORTHO05D003618 6.6e-24 115.5 119 51.3
BcaC07g41918 Brassica carinata HOM05D003118 ORTHO05D003618 1.1e-23 114.8 266 29.7
BolC8t52504H Brassica oleracea HOM05D003118 ORTHO05D003618 1.1e-23 114.8 266 29.7
A06p05760 Brassica napus HOM05D003118 ORTHO05D003618 3.3e-23 113.2 262 30.5
BraA09t41913Z Brassica rapa HOM05D003118 ORTHO05D003618 9.5e-23 111.7 267 30.0
Sc01g0009900 Simmondsia chinensis HOM05D003118 ORTHO05D003618 4.7e-22 109.4 210 35.7
Medtr7g063200 Medicago truncatula HOM05D003118 ORTHO05D003618 1.4e-21 107.8 274 27.7
MELO3C005717.2 Cucumis melo HOM05D003118 ORTHO05D003618 8.9e-21 105.1 358 26.5
Haze_08746 Corylus avellana HOM05D003118 ORTHO05D003618 2.0e-20 104.0 119 47.1
A09p65700 Brassica napus HOM05D003118 ORTHO05D003618 2.6e-20 103.6 256 29.3
BraA06t23787Z Brassica rapa HOM05D003118 ORTHO05D003618 3.4e-20 103.2 277 28.9
ECA236G4268 Erigeron canadensis HOM05D003118 ORTHO05D003618 4.4e-20 102.8 202 34.7
Mapoly0002s0236 Marchantia polymorpha HOM05D003118 ORTHO05D003618 5.8e-20 102.4 266 25.6
Medtr8g447390 Medicago truncatula HOM05D003118 ORTHO05D003618 2.2e-19 100.5 187 29.9
FAN18G3666 Fragaria x ananassa HOM05D003118 ORTHO05D003618 8.3e-19 98.6 104 47.1
Hund14263 Selenicereus undatus HOM05D003118 ORTHO05D003618 1.1e-18 98.2 142 41.5
Pp3c25_1090 Physcomitrium patens HOM05D003118 ORTHO05D003618 2.4e-18 97.1 297 25.9
ATR0721G124 Amborella trichopoda HOM05D003118 ORTHO05D003618 1.2e-17 94.7 119 41.2
TPR.G24909 Trifolium pratense HOM05D003118 ORTHO05D003618 2.0e-17 94.0 229 27.1
Hund14265 Selenicereus undatus HOM05D003118 ORTHO05D003618 6.0e-17 92.4 121 44.6
BcaB07g34111 Brassica carinata HOM05D003118 ORTHO05D003618 7.3e-15 85.5 205 29.8
Thhalv10007035m.g Eutrema salsugineum HOM05D003118 ORTHO05D003618 8.1e-14 82.0 118 41.5
Sp1g07530 Schrenkiella parvula HOM05D003118 ORTHO05D003618 8.1e-14 82.0 322 26.4
Cpa.g.sc201.12 Carica papaya HOM05D003118 ORTHO05D003618 1.8e-13 80.9 147 33.3
MBI01_g15047_MAGBIO Magnolia biondii HOM05D003118 ORTHO05D003618 4.0e-13 79.7 64 54.7
MBI18_g41292_MAGBIO Magnolia biondii HOM05D003118 ORTHO05D003618 4.0e-13 79.7 65 53.8
BolC5t29453H Brassica oleracea HOM05D003118 ORTHO05D032428 8.3e-11 72.0 244 26.6
C05p06950 Brassica napus HOM05D003118 ORTHO05D003618 1.6e-09 67.8 181 26.5
Cpa.g.c33497.2 Carica papaya HOM05D003118 ORTHO05D003618 7.8e-09 65.5 59 54.2
SMO116G0096 Selaginella moellendorffii HOM05D003118 ORTHO05D003898 7.8e-09 65.5 173 27.2
Actinidia27618 Actinidia chinensis HOM05D003118 ORTHO05D003618 5.1e-08 62.8 123 35.8
FAN11G3071 Fragaria x ananassa HOM05D003118 ORTHO05D003618 1.2e-06 58.2 128 32.0
HanXRQChr11g0344401 Helianthus annuus HOM05D003118 ORTHO05D003618 1.2e-06 58.2 70 35.7
TWI59G0290 Tripterygium wilfordii HOM05D003118 ORTHO05D003618 1.6e-06 57.8 72 44.4
FAN11G3379 Fragaria x ananassa HOM05D003118 ORTHO05D003618 3.6e-06 56.6 91 38.5


User provided reference genes

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