Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000914g0010 Nicotiana tabacum HOM05D005630 ORTHO05D006979 2.6e-69 265.4 145 100.0
Nitab4.5_0003965g0050 Nicotiana tabacum HOM05D005630 ORTHO05D006979 8.6e-65 250.4 151 89.4
PGSC0003DMG400023408 Solanum tuberosum HOM05D005630 ORTHO05D006979 5.8e-61 237.7 126 91.3
CSS0013521 Camellia sinensis var. sinensis HOM05D005630 ORTHO05D006979 3.7e-60 235.0 126 87.3
Solyc05g054990.3 Solanum lycopersicum HOM05D005630 ORTHO05D006979 3.2e-59 231.9 126 88.9
Sopen05g033450 Solanum pennellii HOM05D005630 ORTHO05D006979 5.4e-59 231.1 125 89.6
Hma1.2p1_1164F.1_g262820 Hydrangea macrophylla HOM05D005630 ORTHO05D006979 7.1e-59 230.7 126 86.5
Sopen02g029090 Solanum pennellii HOM05D005630 ORTHO05D006979 7.1e-59 230.7 126 88.1
Oeu028785.1 Olea europaea HOM05D005630 ORTHO05D006979 2.7e-58 228.8 126 82.5
Solyc02g084380.3 Solanum lycopersicum HOM05D005630 ORTHO05D006979 3.5e-58 228.4 126 87.3
Nitab4.5_0002880g0080 Nicotiana tabacum HOM05D005630 ORTHO05D006979 7.8e-58 227.3 126 84.9
CAN.G1465.11 Capsicum annuum HOM05D005630 ORTHO05D006979 3.0e-57 225.3 125 85.6
Nitab4.5_0005975g0020 Nicotiana tabacum HOM05D005630 ORTHO05D006979 3.9e-57 224.9 126 84.9
Peaxi162Scf00083g01117 Petunia axillaris HOM05D005630 ORTHO05D006979 2.5e-56 222.2 126 83.3
QL02p091555 Quercus lobata HOM05D005630 ORTHO05D006979 3.3e-56 221.9 127 82.7
CAN.G1505.19 Capsicum annuum HOM05D005630 ORTHO05D006979 5.6e-56 221.1 126 83.3
Actinidia03956 Actinidia chinensis HOM05D005630 ORTHO05D006979 1.2e-55 219.9 125 84.0
Haze_19305 Corylus avellana HOM05D005630 ORTHO05D006979 8.1e-55 217.2 126 81.7
CiPaw.04G061600 Carya illinoinensis HOM05D005630 ORTHO05D006979 2.4e-54 215.7 127 80.3
HanXRQChr10g0314501 Helianthus annuus HOM05D005630 ORTHO05D006979 5.2e-54 214.5 124 79.8
Prupe.3G048400 Prunus persica HOM05D005630 ORTHO05D006979 5.2e-54 214.5 127 78.7
Cfa020874 Carpinus fangiana HOM05D005630 ORTHO05D006979 6.8e-54 214.2 126 81.0
Nn8g40117 Nelumbo nucifera HOM05D005630 ORTHO05D006979 6.8e-54 214.2 127 81.9
TWI34G2008 Tripterygium wilfordii HOM05D005630 ORTHO05D006979 8.9e-54 213.8 127 80.3
TAR383G0582 Trochodendron aralioides HOM05D005630 ORTHO05D006979 8.9e-54 213.8 127 78.7
CANSAT11G0524 Cannabis sativa HOM05D005630 ORTHO05D006979 1.5e-53 213.0 127 79.5
Lsat_1_v5_gn_5_90640 Lactuca sativa HOM05D005630 ORTHO05D006979 1.5e-53 213.0 124 78.2
MSTRG.19630 Avicennia marina HOM05D005630 ORTHO05D006979 2.0e-53 212.6 126 79.4
Rhsim03G0057400 Rhododendron simsii HOM05D005630 ORTHO05D006979 2.6e-53 212.2 118 82.2
ClCG10G005100 Citrullus lanatus HOM05D005630 ORTHO05D006979 3.4e-53 211.8 126 78.6
Prupe.7G253200 Prunus persica HOM05D005630 ORTHO05D006979 4.4e-53 211.5 127 77.2
Actinidia37787 Actinidia chinensis HOM05D005630 ORTHO05D006979 9.9e-53 210.3 119 82.4
MD02G1012200 Malus domestica HOM05D005630 ORTHO05D006979 2.2e-52 209.1 124 79.0
Sc08g0004950 Simmondsia chinensis HOM05D005630 ORTHO05D006979 2.9e-52 208.8 127 75.6
PGR142G4039 Punica granatum HOM05D005630 ORTHO05D006979 3.8e-52 208.4 127 77.2
Cc06_g16720 Coffea canephora HOM05D005630 ORTHO05D006979 6.4e-52 207.6 126 79.4
Sed0022514 Sechium edule HOM05D005630 ORTHO05D006979 8.4e-52 207.2 126 76.2
MD15G1158000 Malus domestica HOM05D005630 ORTHO05D006979 1.9e-51 206.1 126 77.8
Duzib128G0941 Durio zibethinus HOM05D005630 ORTHO05D006979 2.4e-51 205.7 127 75.6
Atru.chr7.200 Acer truncatum HOM05D005630 ORTHO05D006979 5.4e-51 204.5 126 75.4
Gohir.D05G282200 Gossypium hirsutum HOM05D005630 ORTHO05D006979 5.4e-51 204.5 127 76.4
Gorai.009G295600 Gossypium raimondii HOM05D005630 ORTHO05D006979 5.4e-51 204.5 127 76.4
RcHm_v2.0_Chr2g0086501 Rosa chinensis HOM05D005630 ORTHO05D006979 9.2e-51 203.8 125 75.2
Migut.J01281 Erythranthe guttata HOM05D005630 ORTHO05D006979 1.6e-50 203.0 126 75.4
Gohir.A05G280400 Gossypium hirsutum HOM05D005630 ORTHO05D006979 3.5e-50 201.8 127 74.8
Eucgr.H01228 Eucalyptus grandis HOM05D005630 ORTHO05D006979 1.0e-49 200.3 127 70.9
Potri.018G113200 Populus trichocarpa HOM05D005630 ORTHO05D006979 1.0e-49 200.3 129 72.9
Eucgr.H01921 Eucalyptus grandis HOM05D005630 ORTHO05D006979 3.0e-49 198.7 127 70.1
ECA234G3390 Erigeron canadensis HOM05D000399 ORTHO05D000304 6.6e-49 197.6 125 75.2
GSVIVG01001041001 Vitis vinifera HOM05D005630 ORTHO05D006979 1.5e-48 196.4 121 77.7
MELO3C014176.2 Cucumis melo HOM05D005630 ORTHO05D006979 1.9e-48 196.1 127 74.8
FvH4_1g01540 Fragaria vesca HOM05D005630 ORTHO05D006979 3.3e-48 195.3 119 74.8
FAN28G1107 Fragaria x ananassa HOM05D005630 ORTHO05D006979 3.3e-48 195.3 119 74.8
COL.COLO4_35448 Corchorus olitorius HOM05D000321 ORTHO05D000204 4.3e-48 194.9 120 74.2
Dinv41416 Davidia involucrata HOM05D005630 ORTHO05D006979 4.3e-48 194.9 107 85.0
FAN26G1041 Fragaria x ananassa HOM05D005630 ORTHO05D006979 4.3e-48 194.9 126 71.4
CsaV3_3G004770 Cucumis sativus L. HOM05D005630 ORTHO05D006979 9.6e-48 193.7 127 74.0
vmacro07529 Vaccinium macrocarpon HOM05D005630 ORTHO05D006979 9.6e-48 193.7 100 88.0
EL10Ac4g09637 Beta vulgaris HOM05D005630 ORTHO05D006979 3.6e-47 191.8 126 70.6
Manes.03G015700 Manihot esculenta HOM05D005630 ORTHO05D006979 4.7e-47 191.4 125 71.2
SGA_v2.0_scaffold336G49163 Striga asiatica HOM05D005630 ORTHO05D006979 4.7e-47 191.4 126 69.0
unitig_46.g18374 Utricularia gibba HOM05D005736 ORTHO05D007215 6.2e-47 191.0 126 69.8
DCAR_019353 Daucus carota HOM05D000452 ORTHO05D000647 1.1e-46 190.3 122 71.3
Oeu040774.1 Olea europaea HOM05D005630 ORTHO05D006979 3.1e-46 188.7 167 58.1
unitig_46.g18303 Utricularia gibba HOM05D005630 ORTHO05D006979 1.2e-45 186.8 121 71.1
Ciclev10009802m.g Citrus clementina HOM05D005630 ORTHO05D006979 1.5e-45 186.4 127 71.7
SalBow1G1736 Salvia bowleyana HOM05D005630 ORTHO05D006979 2.0e-45 186.0 125 70.4
Lj2g0025219 Lotus japonicus HOM05D005630 ORTHO05D006979 3.4e-45 185.3 118 72.0
Lj3g0020108 Lotus japonicus HOM05D005630 ORTHO05D006979 3.4e-45 185.3 128 70.3
THA.LOC104826572 Tarenaya hassleriana HOM05D005630 ORTHO05D006979 5.8e-45 184.5 127 69.3
Ca_08945_v3 Cicer arietinum L. HOM05D005630 ORTHO05D006979 2.4e-43 179.1 127 67.7
Phvul.004G170400 Phaseolus vulgaris HOM05D005630 ORTHO05D006979 5.4e-43 177.9 118 70.3
Psat3g037680 Pisum sativum HOM05D005630 ORTHO05D006979 1.2e-42 176.8 118 67.8
VMungo0464G1149 Vigna mungo HOM05D005630 ORTHO05D006979 1.6e-42 176.4 118 69.5
C03p49710 Brassica napus HOM05D005630 ORTHO05D006979 2.1e-42 176.0 125 63.2
Aa31LG8G5570 Aethionema arabicum HOM05D005630 ORTHO05D006979 3.5e-42 175.3 126 63.5
Glyma.16G077600 Glycine max HOM05D005630 ORTHO05D006979 3.5e-42 175.3 118 70.3
Os01g0220300 Oryza sativa ssp. japonica HOM05D005630 ORTHO05D006979 3.5e-42 175.3 119 65.5
TPR.G21379 Trifolium pratense HOM05D005630 ORTHO05D006979 3.5e-42 175.3 118 68.6
TPR.G31501 Trifolium pratense HOM05D005630 ORTHO05D006979 3.5e-42 175.3 120 67.5
BcaB06g25926 Brassica carinata HOM05D005630 ORTHO05D006979 4.6e-42 174.9 120 65.8
FAN23G2038 Fragaria x ananassa HOM05D005630 ORTHO05D006979 6.0e-42 174.5 167 53.9
Medtr7g103190 Medicago truncatula HOM05D005630 ORTHO05D006979 7.8e-42 174.1 127 66.1
AL3G32110 Arabidopsis lyrata HOM05D005630 ORTHO05D006979 1.0e-41 173.7 126 65.1
AT3G18760 Arabidopsis thaliana HOM05D005630 ORTHO05D006979 1.0e-41 173.7 125 65.6
BraA05t21929Z Brassica rapa HOM05D005630 ORTHO05D006979 1.0e-41 173.7 125 64.8
BcaC05g28577 Brassica carinata HOM05D005630 ORTHO05D006979 1.3e-41 173.3 108 71.3
A05p30870 Brassica napus HOM05D005630 ORTHO05D006979 1.3e-41 173.3 108 71.3
C05p46800 Brassica napus HOM05D005630 ORTHO05D006979 1.3e-41 173.3 108 71.3
BolC5t33410H Brassica oleracea HOM05D005630 ORTHO05D006979 1.3e-41 173.3 108 71.3
Glyma.01G008800 Glycine max HOM05D005630 ORTHO05D006979 1.3e-41 173.3 117 70.1
BcaB04g19003 Brassica carinata HOM05D005630 ORTHO05D006979 1.7e-41 172.9 126 64.3
Sp3g16800 Schrenkiella parvula HOM05D005630 ORTHO05D006979 1.7e-41 172.9 126 64.3
CARHR094150 Cardamine hirsuta HOM05D005630 ORTHO05D006979 2.3e-41 172.6 125 64.8
Lalb_Chr01g0020901 Lupinus albus HOM05D005630 ORTHO05D006979 3.0e-41 172.2 117 70.1
THA.LOC104815401 Tarenaya hassleriana HOM05D005630 ORTHO05D006979 3.9e-41 171.8 126 62.7
Thhalv10021733m.g Eutrema salsugineum HOM05D005630 ORTHO05D006979 5.1e-41 171.4 127 64.6
BraA03t13240Z Brassica rapa HOM05D005630 ORTHO05D006979 6.6e-41 171.0 125 60.0
BolC3t17269H Brassica oleracea HOM05D005630 ORTHO05D006979 1.1e-40 170.2 125 60.8
Carub.0003s1855 Capsella rubella HOM05D005630 ORTHO05D006979 1.1e-40 170.2 102 74.5
VMungo0464G1592 Vigna mungo HOM05D005630 ORTHO05D006979 2.5e-40 169.1 118 67.8
arahy.Tifrunner.gnm1.ann1.N9H741 Arachis hypogaea HOM05D005630 ORTHO05D006979 3.3e-40 168.7 108 70.4
Medtr6g088605 Medicago truncatula HOM05D005630 ORTHO05D006979 1.3e-39 166.8 118 63.6
PSO210G0346 Papaver somniferum HOM05D005630 ORTHO05D006979 1.3e-39 166.8 104 75.0
PSO210G6044 Papaver somniferum HOM05D005630 ORTHO05D006979 1.3e-39 166.8 104 75.0
Thecc.10G171800 Theobroma cacao HOM05D005630 ORTHO05D006979 6.2e-39 164.5 107 72.9
Psat5g026240 Pisum sativum HOM05D005630 ORTHO05D006979 1.8e-38 162.9 98 73.5
FAN19G2317 Fragaria x ananassa HOM05D005630 ORTHO05D006979 9.0e-38 160.6 119 65.5
unitig_48.g30288 Utricularia gibba HOM05D005630 ORTHO05D006979 2.0e-37 159.5 104 70.2
HPP92_008634 Vanilla planifolia HOM05D005630 ORTHO05D006979 5.8e-37 157.9 120 60.8
Zm00001eb119770 Zea mays HOM05D005630 ORTHO05D006979 5.8e-37 157.9 118 62.7
A03p40820 Brassica napus HOM05D005630 ORTHO05D006979 7.6e-37 157.5 126 60.3
MBI07_g35858_MAGBIO Magnolia biondii HOM05D005630 ORTHO05D006979 9.3e-35 150.6 87 80.5
CDE02G3819 Ceratophyllum demersum HOM05D005630 ORTHO05D006979 3.9e-33 145.2 84 78.6
Ah.01g003710 Amaranthus hybridus HOM05D005630 ORTHO05D006979 8.7e-33 144.1 113 62.8
Eucgr.B02192 Eucalyptus grandis HOM05D005630 ORTHO05D006979 1.2e-26 123.6 78 67.9
Pp3c3_21570 Physcomitrium patens HOM05D005630 ORTHO05D006979 1.2e-26 123.6 97 52.6
AagrBONN_evm.TU.Sc2ySwM_117.2919 Anthoceros agrestis HOM05D005630 ORTHO05D006979 7.9e-26 120.9 101 53.5
Lj7A451T27 Lonicera japonica HOM05D005630 ORTHO05D006979 1.9e-24 116.3 61 86.9
SMO146G0230 Selaginella moellendorffii HOM05D005630 ORTHO05D006979 3.7e-23 112.1 101 48.5
Mapoly0179s0002 Marchantia polymorpha HOM05D005630 ORTHO05D006979 6.9e-22 107.8 97 50.5
SGA_v2.0_scaffold416G51224 Striga asiatica HOM05D005630 ORTHO05D006979 7.6e-21 104.4 61 75.4
Cpa.g.sc20.36 Carica papaya HOM05D005630 ORTHO05D006979 1.0e-20 104.0 85 62.4
AUR62001080 Chenopodium quinoa HOM05D005630 ORTHO05D006979 2.9e-20 102.4 61 75.4
CBR_g37184 Chara braunii HOM05D005630 ORTHO05D006979 3.2e-19 99.0 98 49.0
Eucgr.L01073 Eucalyptus grandis HOM05D005630 ORTHO05D006979 1.2e-18 97.1 67 64.2
AUR62004880 Chenopodium quinoa HOM05D005630 ORTHO05D006979 3.5e-18 95.5 61 70.5
Nn2g11495 Nelumbo nucifera HOM05D005630 ORTHO05D006979 1.1e-16 90.5 63 68.3
SEGI_16423 Sequoiadendron giganteum HOM05D005630 ORTHO05D006979 1.9e-16 89.7 85 49.4
ATR1096G006 Amborella trichopoda HOM05D005630 ORTHO05D006979 4.3e-16 88.6 67 64.2
MBI07_g26347_MAGBIO Magnolia biondii HOM05D005630 ORTHO05D006979 9.7e-16 87.4 67 62.7
MD16G1239100 Malus domestica HOM05D005630 ORTHO05D006979 6.3e-15 84.7 57 66.7
TPR.G10852 Trifolium pratense HOM05D005630 ORTHO05D006979 1.3e-12 77.0 49 71.4
SalBow1G6627 Salvia bowleyana HOM05D005630 ORTHO05D006979 6.5e-12 74.7 59 61.0
AUR62039003 Chenopodium quinoa HOM05D005630 ORTHO05D006979 1.6e-10 70.1 48 62.5
MCO04G088 Micromonas commoda HOM05D005630 ORTHO05D006979 4.6e-10 68.6 116 29.3
Cre12.g558000 Chlamydomonas reinhardtii HOM05D005630 ORTHO05D006979 7.4e-08 61.2 96 33.3
Medtr5g037160 Medicago truncatula HOM05D005630 ORTHO05D000782 6.3e-07 58.2 34 70.6


User provided reference genes

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