Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000912g0210 Nicotiana tabacum HOM05D006225 ORTHO05D007676 1.0e-218 763.1 385 100.0
Nitab4.5_0000659g0030 Nicotiana tabacum HOM05D006225 ORTHO05D007676 5.5e-167 591.3 321 95.6
Sopen02g030750 Solanum pennellii HOM05D006225 ORTHO05D007676 2.9e-144 515.8 338 80.8
PGSC0003DMG400026393 Solanum tuberosum HOM05D006225 ORTHO05D007676 6.5e-144 514.6 320 84.7
SGA_v2.0_scaffold33G13506 Striga asiatica HOM05D006225 ORTHO05D007676 1.7e-123 446.8 319 72.7
CSS0013578 Camellia sinensis var. sinensis HOM05D006225 ORTHO05D007676 8.3e-123 444.5 322 72.7
CSS0045838 Camellia sinensis var. sinensis HOM05D006225 ORTHO05D007676 1.8e-122 443.4 322 72.4
SalBow3G1182 Salvia bowleyana HOM05D006225 ORTHO05D007676 4.1e-122 442.2 331 68.6
Lsat_1_v5_gn_2_79301 Lactuca sativa HOM05D006225 ORTHO05D007676 7.0e-122 441.4 297 74.1
MD02G1195600 Malus domestica HOM05D006225 ORTHO05D007676 5.0e-120 435.3 308 73.1
Nn4g23886 Nelumbo nucifera HOM05D006225 ORTHO05D007676 6.5e-120 434.9 322 68.3
Prupe.2G152900 Prunus persica HOM05D006225 ORTHO05D007676 6.5e-120 434.9 322 71.1
COL.COLO4_09333 Corchorus olitorius HOM05D006225 ORTHO05D007676 8.6e-120 434.5 314 72.0
HanXRQChr14g0438471 Helianthus annuus HOM05D006225 ORTHO05D007676 1.9e-119 433.3 314 71.3
Lj4A191G46 Lonicera japonica HOM05D006225 ORTHO05D007676 3.2e-119 432.6 304 75.3
Atru.chr1.1695 Acer truncatum HOM05D006225 ORTHO05D007676 7.2e-119 431.4 321 70.7
ECA238G0211 Erigeron canadensis HOM05D006225 ORTHO05D007676 1.6e-118 430.3 320 70.9
Gohir.D12G052400 Gossypium hirsutum HOM05D006225 ORTHO05D007676 3.6e-118 429.1 321 71.3
GSVIVG01031021001 Vitis vinifera HOM05D006225 ORTHO05D007676 3.6e-118 429.1 325 68.9
CsaV3_3G020710 Cucumis sativus L. HOM05D006225 ORTHO05D007676 6.1e-118 428.3 322 69.9
CiPaw.03G061500 Carya illinoinensis HOM05D006225 ORTHO05D007676 1.0e-117 427.6 322 69.9
Thecc.04G133700 Theobroma cacao HOM05D006225 ORTHO05D007676 1.4e-117 427.2 321 69.8
Gohir.A12G053700 Gossypium hirsutum HOM05D006225 ORTHO05D007676 1.8e-117 426.8 321 71.0
Gorai.008G055500 Gossypium raimondii HOM05D006225 ORTHO05D007676 1.8e-117 426.8 321 71.0
Ciclev10012061m.g Citrus clementina HOM05D006225 ORTHO05D007676 3.0e-117 426.0 322 68.9
Manes.02G068700 Manihot esculenta HOM05D006225 ORTHO05D007676 3.0e-117 426.0 322 71.7
TAR374G0830 Trochodendron aralioides HOM05D006225 ORTHO05D007676 4.0e-117 425.6 329 67.5
Migut.H00218 Erythranthe guttata HOM05D006225 ORTHO05D007676 1.2e-116 424.1 318 68.9
TWI77G0942 Tripterygium wilfordii HOM05D006225 ORTHO05D007676 2.0e-116 423.3 322 70.8
Sabra17G0095400 Salix brachista HOM05D006225 ORTHO05D007676 7.5e-116 421.4 308 71.8
Cpa.g.sc282.8 Carica papaya HOM05D006225 ORTHO05D007676 2.2e-115 419.9 296 72.6
FvH4_7g12860 Fragaria vesca HOM05D006225 ORTHO05D007676 6.3e-115 418.3 322 66.8
FAN06G1752 Fragaria x ananassa HOM05D006225 ORTHO05D007676 6.3e-115 418.3 322 66.8
Potri.017G115200 Populus trichocarpa HOM05D006225 ORTHO05D007676 6.3e-115 418.3 322 69.3
Carub.0007s3769 Capsella rubella HOM05D006225 ORTHO05D007676 1.8e-114 416.8 300 70.7
FAN03G3320 Fragaria x ananassa HOM05D006225 ORTHO05D007676 1.8e-114 416.8 322 66.5
Sp7g03650 Schrenkiella parvula HOM05D006225 ORTHO05D007676 2.4e-114 416.4 325 67.1
AT5G38380 Arabidopsis thaliana HOM05D006225 ORTHO05D007676 3.1e-114 416.0 325 67.4
AL7G52230 Arabidopsis lyrata HOM05D006225 ORTHO05D007676 5.4e-114 415.2 325 67.1
CARHR214220 Cardamine hirsuta HOM05D006225 ORTHO05D007676 5.4e-114 415.2 325 66.8
CANSAT78G2127 Cannabis sativa HOM05D006225 ORTHO05D007676 1.2e-113 414.1 322 68.6
Thhalv10027811m.g Eutrema salsugineum HOM05D006225 ORTHO05D007676 5.9e-113 411.8 325 66.8
BraA04t16801Z Brassica rapa HOM05D006225 ORTHO05D007676 1.0e-112 411.0 326 66.0
A04p11390 Brassica napus HOM05D006225 ORTHO05D007676 1.7e-112 410.2 325 65.8
C04p45020 Brassica napus HOM05D006225 ORTHO05D007676 1.7e-112 410.2 326 65.3
BolC4t26080H Brassica oleracea HOM05D006225 ORTHO05D007676 1.7e-112 410.2 326 65.3
Lj2g0022404 Lotus japonicus HOM05D006225 ORTHO05D007676 2.3e-112 409.8 340 64.7
PSO063G1031 Papaver somniferum HOM05D006225 ORTHO05D007676 2.3e-112 409.8 322 64.3
Aa31LG9G17110 Aethionema arabicum HOM05D006225 ORTHO05D007676 8.6e-112 407.9 324 66.0
Ca_13730_v3 Cicer arietinum L. HOM05D006225 ORTHO05D007676 8.6e-112 407.9 322 66.5
Medtr6g018620 Medicago truncatula HOM05D006225 ORTHO05D007676 8.6e-112 407.9 322 66.8
BcaC02g09645 Brassica carinata HOM05D006225 ORTHO05D007676 1.1e-111 407.5 326 65.0
Psat1g081360 Pisum sativum HOM05D006225 ORTHO05D007676 1.1e-111 407.5 343 63.3
BcaB02g08011 Brassica carinata HOM05D006225 ORTHO05D007676 1.5e-111 407.1 326 65.3
Eucgr.G01883 Eucalyptus grandis HOM05D006225 ORTHO05D007676 1.5e-111 407.1 322 67.7
QL02p051369 Quercus lobata HOM05D006225 ORTHO05D007676 1.5e-111 407.1 369 60.4
BcaB06g27198 Brassica carinata HOM05D006225 ORTHO05D007676 5.6e-111 405.2 326 64.7
Sed0021803 Sechium edule HOM05D006225 ORTHO05D007676 9.5e-111 404.4 342 63.5
Glyma.13G045900 Glycine max HOM05D006225 ORTHO05D007676 1.2e-110 404.1 324 66.4
TPR.G32473 Trifolium pratense HOM05D006225 ORTHO05D007676 1.6e-110 403.7 322 66.1
PSO782G1071 Papaver somniferum HOM05D006225 ORTHO05D007676 3.6e-110 402.5 316 64.2
Glyma.19G049100 Glycine max HOM05D006225 ORTHO05D007676 8.0e-110 401.4 324 66.0
PGR042G1089 Punica granatum HOM05D006225 ORTHO05D007676 1.2e-108 397.5 323 65.6
Phvul.004G065800 Phaseolus vulgaris HOM05D006225 ORTHO05D007676 1.5e-108 397.1 324 65.4
THA.LOC104823860 Tarenaya hassleriana HOM05D006225 ORTHO05D007676 1.5e-108 397.1 323 65.9
vmacro05555 Vaccinium macrocarpon HOM05D006225 ORTHO05D007676 9.8e-108 394.4 323 65.6
Lalb_Chr06g0174551 Lupinus albus HOM05D006225 ORTHO05D007676 1.3e-107 394.0 373 57.9
VMungo0464G1087 Vigna mungo HOM05D006225 ORTHO05D007676 8.3e-107 391.3 333 63.4
Oeu030786.4 Olea europaea HOM05D006225 ORTHO05D007676 5.4e-106 388.7 312 67.0
Aqoxy3G03957 Aquilegia oxysepala HOM05D006225 ORTHO05D007676 1.5e-103 380.6 322 61.8
EL10Ac2g04565 Beta vulgaris HOM05D006225 ORTHO05D007676 5.6e-103 378.6 281 67.6
ATR1125G113 Amborella trichopoda HOM05D006225 ORTHO05D007676 2.1e-102 376.7 310 62.6
AUR62023301 Chenopodium quinoa HOM05D006225 ORTHO05D007676 8.0e-102 374.8 325 60.6
MELO3C023807.2 Cucumis melo HOM05D006225 ORTHO05D007676 6.8e-101 371.7 413 51.3
AUR62009001 Chenopodium quinoa HOM05D006225 ORTHO05D007676 1.1e-98 364.4 296 62.8
Os07g0283200 Oryza sativa ssp. japonica HOM05D006225 ORTHO05D007676 9.2e-98 361.3 323 57.9
HPP92_020146 Vanilla planifolia HOM05D006225 ORTHO05D007676 1.3e-96 357.5 322 59.0
Zm00001eb360540 Zea mays HOM05D006225 ORTHO05D007676 3.0e-96 356.3 321 57.6
unitig_0.g7 Utricularia gibba HOM05D006225 ORTHO05D007676 2.5e-95 353.2 298 62.4
Rhsim10G0067300 Rhododendron simsii HOM05D006225 ORTHO05D007676 1.8e-93 347.1 368 53.0
SEGI_09013 Sequoiadendron giganteum HOM05D006225 ORTHO05D007676 2.2e-91 340.1 309 56.6
FAN10G1546 Fragaria x ananassa HOM05D006225 ORTHO05D007676 1.4e-85 320.9 344 51.7
Cfa007923 Carpinus fangiana HOM05D006225 ORTHO05D010559 4.9e-83 312.4 253 67.6
ClCG05G011660 Citrullus lanatus HOM05D006225 ORTHO05D007676 6.4e-83 312.0 347 53.3
arahy.Tifrunner.gnm1.ann1.IRK6TR Arachis hypogaea HOM05D006225 ORTHO05D007676 6.6e-80 302.0 246 64.6
arahy.Tifrunner.gnm1.ann1.80Z7L9 Arachis hypogaea HOM05D006225 ORTHO05D007676 1.1e-77 294.7 272 58.1
Peaxi162Scf00394g00621 Petunia axillaris HOM05D006225 ORTHO05D007676 1.0e-72 278.1 153 92.2
Haze_14153 Corylus avellana HOM05D006225 ORTHO05D007676 4.0e-69 266.2 280 56.4
Solyc02g086070.2 Solanum lycopersicum HOM05D006225 ORTHO05D007676 5.8e-68 262.3 131 96.2
Mapoly0135s0006 Marchantia polymorpha HOM05D006225 ORTHO05D007676 1.1e-66 258.1 301 47.8
Solyc02g086060.4 Solanum lycopersicum HOM05D006225 ORTHO05D007676 3.2e-66 256.5 155 89.0
Sc11g0008330 Simmondsia chinensis HOM05D006225 ORTHO05D007676 3.1e-61 240.0 223 60.5
Cc07_g08810 Coffea canephora HOM05D006225 ORTHO05D007676 7.6e-60 235.3 135 87.4
Pp3c6_6620 Physcomitrium patens HOM05D006225 ORTHO05D007676 1.3e-59 234.6 283 44.9
Eucgr.H04974 Eucalyptus grandis HOM05D006225 ORTHO05D007676 4.2e-58 229.6 215 58.6
SMO196G0121 Selaginella moellendorffii HOM05D006225 ORTHO05D007676 7.9e-57 225.3 283 44.2
Actinidia15885 Actinidia chinensis HOM05D006225 ORTHO05D007676 1.3e-54 218.0 131 79.4
Hund13715 Selenicereus undatus HOM05D006225 ORTHO05D007676 2.8e-54 216.9 156 67.3
FAN06G4019 Fragaria x ananassa HOM05D006225 ORTHO05D007676 1.1e-53 214.9 138 77.5
RcHm_v2.0_Chr1g0351941 Rosa chinensis HOM05D006225 ORTHO05D007676 1.4e-53 214.5 138 77.5
Zm00001eb156340 Zea mays HOM05D006225 ORTHO05D007676 5.8e-52 209.1 209 55.0
Cc07_g08800 Coffea canephora HOM05D006225 ORTHO05D007676 1.3e-51 208.0 135 76.3
RcHm_v2.0_Chr1g0351931 Rosa chinensis HOM05D006225 ORTHO05D007676 2.9e-51 206.8 131 74.0
CDE02G4721 Ceratophyllum demersum HOM05D006225 ORTHO05D007676 7.9e-49 198.7 145 69.0
Peaxi162Scf00394g00622 Petunia axillaris HOM05D006225 ORTHO05D007676 5.1e-48 196.1 98 95.9
FAN10G1204 Fragaria x ananassa HOM05D006225 ORTHO05D007676 2.6e-44 183.7 134 66.4
Hma1.2p1_0136F.1_g062270 Hydrangea macrophylla HOM05D006225 ORTHO05D007676 3.8e-43 179.9 112 75.0
MD07G1125200 Malus domestica HOM05D006225 ORTHO05D007676 5.5e-42 176.0 112 72.3
arahy.Tifrunner.gnm1.ann1.8IQW6A Arachis hypogaea HOM05D006225 ORTHO05D007676 1.4e-40 171.4 118 66.9
arahy.Tifrunner.gnm1.ann1.PRIQ1K Arachis hypogaea HOM05D006225 ORTHO05D007676 3.9e-40 169.9 151 57.0
SHI22412 Sapria himalayana HOM05D006225 ORTHO05D007676 6.5e-35 152.5 94 73.4
Oeu008428.1 Olea europaea HOM05D006225 ORTHO05D007676 3.6e-33 146.7 98 73.5
arahy.Tifrunner.gnm1.ann1.QBFC9G Arachis hypogaea HOM05D006225 ORTHO05D007676 4.7e-33 146.4 120 60.0
arahy.Tifrunner.gnm1.ann1.RE0KC5 Arachis hypogaea HOM05D006225 ORTHO05D007676 1.0e-32 145.2 130 58.5
arahy.Tifrunner.gnm1.ann1.QHM34M Arachis hypogaea HOM05D006225 ORTHO05D007676 3.3e-31 140.2 130 56.9
arahy.Tifrunner.gnm1.ann1.A87HRQ Arachis hypogaea HOM05D006225 ORTHO05D007676 4.5e-28 129.8 102 60.8
CDE02G0503 Ceratophyllum demersum HOM05D006225 ORTHO05D007676 7.2e-26 122.5 82 65.9
arahy.Tifrunner.gnm1.ann1.5T0UVN Arachis hypogaea HOM05D006225 ORTHO05D007676 9.4e-26 122.1 75 72.0
Mapoly0085s0089 Marchantia polymorpha HOM05D006555 ORTHO05D008376 1.8e-24 117.9 338 26.3
arahy.Tifrunner.gnm1.ann1.FD2CEU Arachis hypogaea HOM05D006225 ORTHO05D007676 8.8e-24 115.5 98 60.2
CBR_g65298 Chara braunii HOM05D006225 ORTHO05D007676 4.5e-20 103.2 111 43.2
HanXRQChr13g0396101 Helianthus annuus HOM05D006225 ORTHO05D007676 4.7e-17 93.2 55 81.8
arahy.Tifrunner.gnm1.ann1.GQQ1MZ Arachis hypogaea HOM05D006225 ORTHO05D007676 1.8e-16 91.3 69 66.7
CBR_g8910 Chara braunii HOM05D006555 ORTHO05D008376 3.3e-15 87.0 177 32.8
Hma1.2p1_0239F.1_g099920 Hydrangea macrophylla HOM05D006225 ORTHO05D007676 4.4e-15 86.7 52 76.9
Actinidia36322 Actinidia chinensis HOM05D006225 ORTHO05D007676 2.2e-14 84.3 45 88.9
Eucgr.L03301 Eucalyptus grandis HOM05D006225 ORTHO05D007676 1.2e-12 78.6 42 90.5
MD07G1125400 Malus domestica HOM05D006225 ORTHO05D007676 2.3e-08 64.3 88 46.6
Gohir.D07G224400 Gossypium hirsutum HOM05D006555 ORTHO05D008376 4.0e-08 63.5 272 23.9
Gorai.001G258800 Gossypium raimondii HOM05D006555 ORTHO05D008376 4.0e-08 63.5 297 23.2
Thecc.04G067100 Theobroma cacao HOM05D006555 ORTHO05D008376 6.8e-08 62.8 301 23.9
Duzib187G0608 Durio zibethinus HOM05D006555 ORTHO05D008376 1.5e-07 61.6 305 24.3
EL10Ac3g05120 Beta vulgaris HOM05D006555 ORTHO05D008376 4.4e-07 60.1 333 22.5
Lsat_1_v5_gn_0_24261 Lactuca sativa HOM05D006555 ORTHO05D008376 1.3e-06 58.5 309 23.3
SEGI_26593 Sequoiadendron giganteum HOM05D006555 ORTHO05D008376 1.3e-06 58.5 125 32.0
TWI56G0535 Tripterygium wilfordii HOM05D006555 ORTHO05D008376 3.7e-06 57.0 309 24.3


User provided reference genes

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