Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000903g0150 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.8e-51 204.1 99 100.0
Nitab4.5_0011092g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.9e-27 125.2 87 72.4
Nitab4.5_0002002g0090 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.6e-25 119.4 60 91.7
Nitab4.5_0000841g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.9e-24 114.8 61 90.2
Nitab4.5_0010513g0020 Nicotiana tabacum HOM05D000995 ORTHO05D001773 3.9e-24 114.8 60 88.3
Nitab4.5_0000154g0180 Nicotiana tabacum HOM05D003574 ORTHO05D002175 8.6e-24 113.6 60 86.7
Nitab4.5_0000065g0250 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.9e-23 112.5 60 85.0
Nitab4.5_0004446g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.9e-23 112.5 60 86.7
Nitab4.5_0006253g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.9e-23 112.5 60 86.7
Nitab4.5_0000239g0140 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.5e-23 112.1 60 85.0
Nitab4.5_0000032g0310 Nicotiana tabacum HOM05D003574 ORTHO05D001773 7.3e-23 110.5 60 81.7
Nitab4.5_0001643g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 9.5e-23 110.2 60 85.0
Nitab4.5_0001868g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 9.5e-23 110.2 60 85.0
Nitab4.5_0000472g0250 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.6e-22 109.4 60 81.7
Nitab4.5_0000687g0080 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.6e-22 109.4 59 84.7
Nitab4.5_0007583g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.7e-22 107.8 54 90.7
Nitab4.5_0000362g0190 Nicotiana tabacum HOM05D003574 ORTHO05D002175 8.0e-22 107.1 60 83.3
Nitab4.5_0002206g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.1e-21 105.1 60 80.0
Nitab4.5_0000417g0050 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.3e-19 99.8 54 85.2
Nitab4.5_0000645g0060 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.7e-19 98.2 60 76.7
Nitab4.5_0001488g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.4e-18 96.3 53 83.0
Nitab4.5_0001512g0100 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.0e-17 92.4 53 81.1
Nitab4.5_0003579g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.5e-15 85.5 41 92.7
Nitab4.5_0004469g0130 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.5e-15 85.5 51 78.4
Nitab4.5_0012756g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.6e-15 84.3 41 92.7
Nitab4.5_0008368g0050 Nicotiana tabacum HOM05D003574 ORTHO05D001773 1.6e-14 82.8 41 87.8
Nitab4.5_0004998g0050 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.8e-14 82.0 44 84.1
Nitab4.5_0000115g0150 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.7e-14 81.3 46 80.4
PGSC0003DMG400043951 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.1e-13 80.1 60 60.0
Solyc10g055685.1 Solanum lycopersicum HOM05D003574 ORTHO05D002175 1.4e-13 79.7 60 56.7
Sopen05g008570 Solanum pennellii HOM05D003574 ORTHO05D002175 1.8e-13 79.3 60 56.7
PGSC0003DMG400018974 Solanum tuberosum HOM05D000995 ORTHO05D001773 1.8e-13 79.3 60 60.0
Nitab4.5_0000043g0360 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.1e-13 78.6 60 58.3
PGSC0003DMG400031332 Solanum tuberosum HOM05D000995 ORTHO05D001773 6.8e-13 77.4 60 58.3
PGSC0003DMG400040325 Solanum tuberosum HOM05D000995 ORTHO05D001773 6.8e-13 77.4 60 58.3
Nitab4.5_0003551g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.5e-12 76.3 60 56.7
PGSC0003DMG400013728 Solanum tuberosum HOM05D000995 ORTHO05D001773 1.5e-12 76.3 60 56.7
Nitab4.5_0000022g0420 Nicotiana tabacum HOM05D000995 ORTHO05D001773 2.0e-12 75.9 89 46.1
Nitab4.5_0005402g0060 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.6e-12 75.5 36 94.4
Nitab4.5_0000160g0070 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.4e-12 75.1 42 83.3
Nitab4.5_0002999g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.4e-12 75.1 60 55.0
PGSC0003DMG400043149 Solanum tuberosum HOM05D003574 ORTHO05D002175 4.4e-12 74.7 60 56.7
PGSC0003DMG400045633 Solanum tuberosum HOM05D003574 ORTHO05D002175 5.8e-12 74.3 60 55.0
Nitab4.5_0002755g0120 Nicotiana tabacum HOM05D003574 ORTHO05D002175 9.9e-12 73.6 35 94.3
Nitab4.5_0004332g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.7e-11 71.6 60 53.3
Nitab4.5_0007148g0080 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.7e-11 71.6 50 66.0
PGSC0003DMG400020615 Solanum tuberosum HOM05D000995 ORTHO05D001773 4.9e-11 71.2 46 65.2
Nitab4.5_0003579g0020 Nicotiana tabacum HOM05D023257 ORTHO05D001773 6.4e-11 70.9 46 73.9
PGSC0003DMG400023952 Solanum tuberosum HOM05D003574 ORTHO05D002175 8.3e-11 70.5 57 54.4
Nitab4.5_0007746g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.1e-10 70.1 97 40.2
Nitab4.5_0005253g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.4e-10 69.7 105 44.8
Nitab4.5_0000936g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.2e-10 68.6 92 42.4
CAN.G1364.7 Capsicum annuum HOM05D000163 ORTHO05D000219 4.1e-10 68.2 60 51.7
Nitab4.5_0000491g0150 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.2e-10 67.0 60 51.7
Nitab4.5_0000134g0090 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.7e-09 65.5 60 50.0
MSTRG.26889 Avicennia marina HOM05D000995 ORTHO05D001773 4.6e-09 64.7 60 43.3
CAN.G19.1 Capsicum annuum HOM05D000703 ORTHO05D026988 6.0e-09 64.3 60 50.0
Nitab4.5_0007170g0060 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.0e-09 64.3 97 38.1
Nitab4.5_0000481g0120 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.8e-09 63.9 35 80.0
Nitab4.5_0000003g0320 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.7e-08 62.8 107 36.4
Nitab4.5_0002311g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.7e-08 62.8 60 48.3
Nitab4.5_0009406g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.3e-08 62.4 60 50.0
PGSC0003DMG400030157 Solanum tuberosum HOM05D003574 ORTHO05D002175 3.0e-08 62.0 56 55.4
Nitab4.5_0004222g0060 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.6e-08 60.8 60 46.7
Nitab4.5_0001057g0130 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.3e-07 58.5 27 96.3
Nitab4.5_0003811g0130 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.3e-07 58.5 57 43.9
Nitab4.5_0000348g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.6e-07 57.8 27 96.3
Nitab4.5_0001250g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.6e-07 57.8 27 96.3
Nitab4.5_0001384g0140 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.6e-07 57.8 27 96.3
Nitab4.5_0001772g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.6e-07 57.8 60 48.3
Nitab4.5_0001960g0100 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.6e-07 57.8 27 96.3
Nitab4.5_0022390g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.6e-07 57.8 27 96.3
Nitab4.5_0026749g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.6e-07 57.8 27 96.3
Nitab4.5_0004998g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.2e-06 56.6 78 48.7
Nitab4.5_0000015g0080 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.6e-06 56.2 27 92.6
Nitab4.5_0009621g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.6e-06 56.2 26 96.2
SalBow6G1622 Salvia bowleyana HOM05D004781 ORTHO05D001773 2.1e-06 55.8 60 40.0
Nitab4.5_0006582g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.8e-06 55.5 27 92.6
Nitab4.5_0004998g0020 Nicotiana tabacum HOM05D003574 ORTHO05D010997 8.1e-06 53.9 28 85.7


User provided reference genes

Program Settings