Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000902g0320 Nicotiana tabacum HOM05D007889 ORTHO05D009987 4.9e-42 174.1 91 100.0
Nitab4.5_0007872g0020 Nicotiana tabacum HOM05D007889 ORTHO05D009987 2.9e-34 148.3 90 86.7
Peaxi162Scf00474g00715 Petunia axillaris HOM05D007889 ORTHO05D009987 1.3e-21 106.3 88 65.9
Solyc11g010680.4 Solanum lycopersicum HOM05D007889 ORTHO05D009987 2.8e-21 105.1 90 64.4
Sopen11g005480 Solanum pennellii HOM05D007889 ORTHO05D009987 2.8e-21 105.1 90 64.4
PGSC0003DMG402016199 Solanum tuberosum HOM05D007889 ORTHO05D009987 6.3e-21 104.0 90 63.3
MSTRG.15685 Avicennia marina HOM05D007889 ORTHO05D009987 1.1e-20 103.2 90 61.1
Cc07_g14040 Coffea canephora HOM05D007889 ORTHO05D009987 4.5e-19 97.8 100 56.0
Nitab4.5_0006221g0010 Nicotiana tabacum HOM05D007889 ORTHO05D009987 4.5e-19 97.8 96 54.2
Nitab4.5_0006217g0010 Nicotiana tabacum HOM05D007889 ORTHO05D009987 1.3e-18 96.3 88 58.0
SalBow3G4637 Salvia bowleyana HOM05D007889 ORTHO05D009987 1.3e-18 96.3 90 57.8
Lsat_1_v5_gn_4_143420 Lactuca sativa HOM05D007889 ORTHO05D009987 2.9e-18 95.1 94 57.4
Oeu012264.1 Olea europaea HOM05D007889 ORTHO05D009987 8.5e-18 93.6 92 56.5
SGA_v2.0_scaffold195G40857 Striga asiatica HOM05D007889 ORTHO05D009987 1.1e-17 93.2 90 56.7
CSS0006316 Camellia sinensis var. sinensis HOM05D007889 ORTHO05D009987 1.4e-17 92.8 93 57.0
CSS0045661 Camellia sinensis var. sinensis HOM05D007889 ORTHO05D009987 1.4e-17 92.8 93 57.0
Dinv36939 Davidia involucrata HOM05D007889 ORTHO05D009987 3.2e-17 91.7 93 58.1
CANSAT01G1217 Cannabis sativa HOM05D007889 ORTHO05D009987 5.5e-17 90.9 92 56.5
PGR102G1376 Punica granatum HOM05D007889 ORTHO05D009987 9.3e-17 90.1 95 53.7
Manes.13G100900 Manihot esculenta HOM05D007889 ORTHO05D009987 3.6e-16 88.2 91 56.0
unitig_32.g11801 Utricularia gibba HOM05D007889 ORTHO05D009987 3.6e-16 88.2 94 54.3
CiPaw.07G047100 Carya illinoinensis HOM05D007889 ORTHO05D009987 6.1e-16 87.4 92 55.4
Atru.chr3.1237 Acer truncatum HOM05D007889 ORTHO05D009987 1.0e-15 86.7 91 54.9
COL.COLO4_27358 Corchorus olitorius HOM05D007889 ORTHO05D009987 1.4e-15 86.3 90 57.8
Duzib147G1657 Durio zibethinus HOM05D007889 ORTHO05D009987 1.4e-15 86.3 94 56.4
Thecc.01G089900 Theobroma cacao HOM05D007889 ORTHO05D009987 1.8e-15 85.9 90 55.6
Actinidia25305 Actinidia chinensis HOM05D007889 ORTHO05D009987 3.0e-15 85.1 93 57.0
Migut.K00803 Erythranthe guttata HOM05D007889 ORTHO05D009987 3.9e-15 84.7 82 57.3
RcHm_v2.0_Chr2g0111151 Rosa chinensis HOM05D007889 ORTHO05D009987 2.5e-14 82.0 92 51.1
FvH4_1g19600 Fragaria vesca HOM05D007889 ORTHO05D009987 5.7e-14 80.9 90 53.3
FAN19G1328 Fragaria x ananassa HOM05D007889 ORTHO05D009987 5.7e-14 80.9 90 53.3
Cpa.g.sc55.18 Carica papaya HOM05D007889 ORTHO05D009987 9.7e-14 80.1 92 52.2
FAN23G2864 Fragaria x ananassa HOM05D007889 ORTHO05D009987 9.7e-14 80.1 90 52.2
FAN26G2710 Fragaria x ananassa HOM05D007889 ORTHO05D009987 9.7e-14 80.1 90 52.2
FAN28G0932 Fragaria x ananassa HOM05D007889 ORTHO05D009987 9.7e-14 80.1 90 53.3
Gohir.A02G144900 Gossypium hirsutum HOM05D007889 ORTHO05D009987 9.7e-14 80.1 90 53.3
Gohir.D03G035700 Gossypium hirsutum HOM05D007889 ORTHO05D009987 9.7e-14 80.1 90 53.3
Gorai.003G037300 Gossypium raimondii HOM05D007889 ORTHO05D009987 9.7e-14 80.1 90 53.3
Lj4g0025467 Lotus japonicus HOM05D007889 ORTHO05D009987 9.7e-14 80.1 90 50.0
TWI74G1088 Tripterygium wilfordii HOM05D007889 ORTHO05D009987 9.7e-14 80.1 93 53.8
Manes.12G125800 Manihot esculenta HOM05D007889 ORTHO05D009987 3.7e-13 78.2 90 51.1
QL06p035849 Quercus lobata HOM05D007889 ORTHO05D009987 4.8e-13 77.8 95 47.4
Sp2g28580 Schrenkiella parvula HOM05D007889 ORTHO05D009987 8.2e-13 77.0 90 46.7
Aa31LG1G16500 Aethionema arabicum HOM05D007889 ORTHO05D009987 1.1e-12 76.6 90 48.9
AT5G65495 Arabidopsis thaliana HOM05D007889 ORTHO05D009987 1.1e-12 76.6 91 49.5
BcaC01g02781 Brassica carinata HOM05D007889 ORTHO05D009987 1.4e-12 76.3 90 45.6
C03p60490 Brassica napus HOM05D007889 ORTHO05D009987 1.4e-12 76.3 90 45.6
TWI77G0910 Tripterygium wilfordii HOM05D007889 ORTHO05D009987 1.4e-12 76.3 93 50.5
BraA06t26160Z Brassica rapa HOM05D007889 ORTHO05D009987 1.8e-12 75.9 90 45.6
THA.LOC109116122 Tarenaya hassleriana HOM05D007889 ORTHO05D009987 1.8e-12 75.9 90 50.0
Carub.0008s2635 Capsella rubella HOM05D007889 ORTHO05D009987 2.4e-12 75.5 91 46.2
AL8G43080 Arabidopsis lyrata HOM05D007889 ORTHO05D009987 3.1e-12 75.1 95 45.3
Haze_03881 Corylus avellana HOM05D007889 ORTHO05D009987 3.1e-12 75.1 91 49.5
ECA232G4810 Erigeron canadensis HOM05D007889 ORTHO05D009987 3.1e-12 75.1 94 48.9
BolC3t18310H Brassica oleracea HOM05D007889 ORTHO05D009987 4.1e-12 74.7 90 45.6
Thhalv10005325m.g Eutrema salsugineum HOM05D007889 ORTHO05D009987 4.1e-12 74.7 95 47.4
THA.LOC109116914 Tarenaya hassleriana HOM05D007889 ORTHO05D009987 4.1e-12 74.7 90 46.7
Prupe.6G202300 Prunus persica HOM05D007889 ORTHO05D009987 9.1e-12 73.6 92 50.0
EL10Ac6g15200 Beta vulgaris HOM05D007889 ORTHO05D009987 1.2e-11 73.2 64 65.6
Ciclev10026840m.g Citrus clementina HOM05D007889 ORTHO05D009987 1.5e-11 72.8 91 48.4
Psat4g119800 Pisum sativum HOM05D007889 ORTHO05D009987 1.5e-11 72.8 90 47.8
Ah.02g123520 Amaranthus hybridus HOM05D007889 ORTHO05D009987 3.4e-11 71.6 97 48.5
Aqoxy5G01377 Aquilegia oxysepala HOM05D007889 ORTHO05D009987 1.7e-10 69.3 85 45.9
Ca_22615_v3 Cicer arietinum L. HOM05D007889 ORTHO05D009987 5.0e-10 67.8 63 55.6
Medtr8g068560 Medicago truncatula HOM05D007889 ORTHO05D009987 8.5e-10 67.0 91 47.3
AUR62003668 Chenopodium quinoa HOM05D007889 ORTHO05D009987 1.1e-09 66.6 94 45.7
MELO3C032898.2 Cucumis melo HOM05D007889 ORTHO05D009987 5.5e-09 64.3 64 56.2
CsaV3_6G044960 Cucumis sativus L. HOM05D007889 ORTHO05D009987 1.6e-08 62.8 56 60.7
Cfa006876 Carpinus fangiana HOM05D007889 ORTHO05D009987 2.1e-08 62.4 91 42.9
Rhsim10G0173200 Rhododendron simsii HOM05D007889 ORTHO05D009987 4.7e-08 61.2 56 58.9
PSO541G6452 Papaver somniferum HOM05D007889 ORTHO05D009987 7.9e-08 60.5 91 41.8
Eucgr.L00470 Eucalyptus grandis HOM05D007889 ORTHO05D009987 2.3e-07 58.9 62 51.6
Nn5g29873 Nelumbo nucifera HOM05D007889 ORTHO05D009987 3.0e-07 58.5 86 41.9
Lalb_Chr05g0228531 Lupinus albus HOM05D007889 ORTHO05D009987 9.7e-06 53.5 62 48.4


User provided reference genes

Program Settings