Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000902g0200 Nicotiana tabacum HOM05D000457 ORTHO05D000560 9.6e-42 172.9 80 100.0
Nitab4.5_0001085g0010 Nicotiana tabacum HOM05D000457 ORTHO05D000560 1.6e-20 102.4 55 85.5
Nitab4.5_0004090g0120 Nicotiana tabacum HOM05D000457 ORTHO05D000560 1.0e-19 99.8 55 80.0
CAN.G1379.26 Capsicum annuum HOM05D000457 ORTHO05D000560 5.1e-19 97.4 55 80.0
Nitab4.5_0004176g0030 Nicotiana tabacum HOM05D000457 ORTHO05D000560 5.1e-19 97.4 55 80.0
Peaxi162Scf00194g00728 Petunia axillaris HOM05D000457 ORTHO05D000560 1.1e-18 96.3 49 87.8
PGSC0003DMG401018223 Solanum tuberosum HOM05D000457 ORTHO05D000560 1.1e-18 96.3 55 78.2
Nitab4.5_0012023g0010 Nicotiana tabacum HOM05D000457 ORTHO05D000560 7.4e-18 93.6 55 78.2
Solyc01g102610.3 Solanum lycopersicum HOM05D000457 ORTHO05D000560 7.4e-18 93.6 55 76.4
Sopen01g045020 Solanum pennellii HOM05D000457 ORTHO05D000560 7.4e-18 93.6 55 76.4
Nitab4.5_0004176g0050 Nicotiana tabacum HOM05D000457 ORTHO05D000560 9.7e-18 93.2 49 83.7
Peaxi162Scf00194g00817 Petunia axillaris HOM05D000457 ORTHO05D000560 1.7e-17 92.4 48 85.4
Peaxi162Scf00071g00030 Petunia axillaris HOM05D000457 ORTHO05D000560 1.2e-15 86.3 55 70.9
DCAR_001876 Daucus carota HOM05D000457 ORTHO05D000560 2.3e-11 72.0 49 63.3
ECA240G2196 Erigeron canadensis HOM05D000457 ORTHO05D000560 8.8e-11 70.1 55 58.2
Lsat_1_v5_gn_7_54801 Lactuca sativa HOM05D000457 ORTHO05D000560 8.8e-11 70.1 55 56.4
Dinv30977 Davidia involucrata HOM05D000457 ORTHO05D000560 2.0e-10 68.9 55 58.2
ECA236G4330 Erigeron canadensis HOM05D000457 ORTHO05D000560 4.4e-10 67.8 55 56.4
Dinv24548 Davidia involucrata HOM05D000457 ORTHO05D000560 5.7e-10 67.4 55 60.0
HanXRQChr14g0440361 Helianthus annuus HOM05D000457 ORTHO05D000560 7.5e-10 67.0 55 54.5
CSS0021656 Camellia sinensis var. sinensis HOM05D000457 ORTHO05D000560 1.7e-09 65.9 55 58.2
Rhsim05G0110400 Rhododendron simsii HOM05D000457 ORTHO05D000560 2.2e-09 65.5 48 60.4
Rhsim05G0110600 Rhododendron simsii HOM05D000457 ORTHO05D000560 2.2e-09 65.5 48 60.4
Cc02_g36770 Coffea canephora HOM05D000457 ORTHO05D000560 2.8e-09 65.1 55 56.4
Dinv24541 Davidia involucrata HOM05D000457 ORTHO05D000560 2.8e-09 65.1 76 48.7
GSVIVG01023105001 Vitis vinifera HOM05D000457 ORTHO05D000560 2.8e-09 65.1 55 58.2
HanXRQChr00c0020g0571101 Helianthus annuus HOM05D000457 ORTHO05D000560 3.7e-09 64.7 55 50.9
Lj5A309T28 Lonicera japonica HOM05D000457 ORTHO05D000560 3.7e-09 64.7 49 59.2
TWI59G0951 Tripterygium wilfordii HOM05D000457 ORTHO05D000560 4.8e-09 64.3 55 54.5
Lsat_1_v5_gn_9_81901 Lactuca sativa HOM05D000457 ORTHO05D000560 6.3e-09 63.9 50 58.0
vmacro19809 Vaccinium macrocarpon HOM05D000457 ORTHO05D000560 6.3e-09 63.9 60 46.7
MSTRG.20345 Avicennia marina HOM05D000457 ORTHO05D000560 8.2e-09 63.5 60 50.0
Duzib114G0620 Durio zibethinus HOM05D000457 ORTHO05D000560 8.2e-09 63.5 55 54.5
Sabra01G0056400 Salix brachista HOM05D000457 ORTHO05D000560 8.2e-09 63.5 55 54.5
Sabra01G0056600 Salix brachista HOM05D000457 ORTHO05D000560 8.2e-09 63.5 55 54.5
TWI59G1411 Tripterygium wilfordii HOM05D000457 ORTHO05D000560 8.2e-09 63.5 55 54.5
Dinv24542 Davidia involucrata HOM05D000457 ORTHO05D000560 1.1e-08 63.2 55 56.4
Eucgr.I01144 Eucalyptus grandis HOM05D000457 ORTHO05D000560 1.8e-08 62.4 75 46.7
Potri.001G079000 Populus trichocarpa HOM05D000457 ORTHO05D000560 1.8e-08 62.4 55 54.5
Atru.chr6.28 Acer truncatum HOM05D000457 ORTHO05D000560 2.4e-08 62.0 55 56.4
CANSAT01G0014 Cannabis sativa HOM05D000457 ORTHO05D000560 2.4e-08 62.0 51 60.8
QL02p104109 Quercus lobata HOM05D000457 ORTHO05D000560 3.1e-08 61.6 55 58.2
QL04p018419 Quercus lobata HOM05D000457 ORTHO05D000560 3.1e-08 61.6 55 58.2
TAR626G0432 Trochodendron aralioides HOM05D000457 ORTHO05D000560 3.1e-08 61.6 55 52.7
Haze_09947 Corylus avellana HOM05D000457 ORTHO05D000560 4.1e-08 61.2 55 58.2
EL10Ac6g13935 Beta vulgaris HOM05D000457 ORTHO05D000560 5.3e-08 60.8 55 60.0
CiPaw.12G009700 Carya illinoinensis HOM05D000457 ORTHO05D000560 5.3e-08 60.8 58 55.2
DCAR_022318 Daucus carota HOM05D000457 ORTHO05D000560 5.3e-08 60.8 56 53.6
vmacro19811 Vaccinium macrocarpon HOM05D000457 ORTHO05D000560 5.3e-08 60.8 55 58.2
Cfa004411 Carpinus fangiana HOM05D000457 ORTHO05D000560 7.0e-08 60.5 55 58.2
Rhsim10G0099300 Rhododendron simsii HOM05D000457 ORTHO05D000560 7.0e-08 60.5 49 61.2
AUR62032510 Chenopodium quinoa HOM05D000457 ORTHO05D000560 9.1e-08 60.1 57 56.1
Actinidia01649 Actinidia chinensis HOM05D000457 ORTHO05D000560 1.2e-07 59.7 75 44.0
Cfa004410 Carpinus fangiana HOM05D000457 ORTHO05D000560 1.2e-07 59.7 55 50.9
PGR142G2765 Punica granatum HOM05D000457 ORTHO05D000560 1.2e-07 59.7 55 58.2
AUR62042817 Chenopodium quinoa HOM05D000457 ORTHO05D000560 1.6e-07 59.3 57 56.1
Haze_09946 Corylus avellana HOM05D000457 ORTHO05D000560 1.6e-07 59.3 55 50.9
QL02p104068 Quercus lobata HOM05D000457 ORTHO05D000560 1.6e-07 59.3 48 56.2
Prupe.1G587800 Prunus persica HOM05D000457 ORTHO05D000560 2.0e-07 58.9 55 58.2
PSO170G2371 Papaver somniferum HOM05D000457 ORTHO05D000560 2.7e-07 58.5 55 54.5
Eucgr.I01139 Eucalyptus grandis HOM05D000457 ORTHO05D000560 3.5e-07 58.2 55 50.9
QL02p104042 Quercus lobata HOM05D000457 ORTHO05D000560 3.5e-07 58.2 55 54.5
QL04p018493 Quercus lobata HOM05D000457 ORTHO05D000560 3.5e-07 58.2 55 54.5
PSO017G6043 Papaver somniferum HOM05D000457 ORTHO05D000560 4.5e-07 57.8 55 54.5
MELO3C016426.2 Cucumis melo HOM05D000457 ORTHO05D000560 5.9e-07 57.4 55 50.9
MD08G1250800 Malus domestica HOM05D000457 ORTHO05D000560 5.9e-07 57.4 49 57.1
QL02p103996 Quercus lobata HOM05D000457 ORTHO05D000560 5.9e-07 57.4 55 50.9
Hund23749 Selenicereus undatus HOM05D000457 ORTHO05D000560 7.7e-07 57.0 57 57.9
ATR1089G123 Amborella trichopoda HOM05D000457 ORTHO05D000560 1.0e-06 56.6 69 47.8
Cfa005110 Carpinus fangiana HOM05D000457 ORTHO05D000560 1.0e-06 56.6 55 54.5
Manes.06G016800 Manihot esculenta HOM05D000457 ORTHO05D000560 1.0e-06 56.6 57 52.6
Thecc.10G064400 Theobroma cacao HOM05D000457 ORTHO05D000560 1.0e-06 56.6 55 49.1
Aa31sc75G60 Aethionema arabicum HOM05D000457 ORTHO05D000560 1.3e-06 56.2 49 59.2
COL.COLO4_06788 Corchorus olitorius HOM05D000457 ORTHO05D000560 1.3e-06 56.2 55 56.4
CsaV3_3G006820 Cucumis sativus L. HOM05D000457 ORTHO05D000560 1.3e-06 56.2 55 49.1
ClCG10G007690 Citrullus lanatus HOM05D000457 ORTHO05D000560 1.7e-06 55.8 55 49.1
MBI03_g28959_MAGBIO Magnolia biondii HOM05D000457 ORTHO05D000560 1.7e-06 55.8 55 52.7
QL10p023888 Quercus lobata HOM05D000457 ORTHO05D000560 1.7e-06 55.8 55 52.7
Aqoxy6G00006 Aquilegia oxysepala HOM05D000457 ORTHO05D000560 2.2e-06 55.5 55 52.7
PGR142G3572 Punica granatum HOM05D000457 ORTHO05D000560 2.2e-06 55.5 55 54.5
Sc03g0005550 Simmondsia chinensis HOM05D000457 ORTHO05D000560 2.9e-06 55.1 56 55.4
Eucgr.I01143 Eucalyptus grandis HOM05D000457 ORTHO05D000560 6.5e-06 53.9 55 45.5
RcHm_v2.0_Chr7g0218171 Rosa chinensis HOM05D000457 ORTHO05D000560 6.5e-06 53.9 55 50.9


User provided reference genes

Program Settings