Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000897g0060 Nicotiana tabacum HOM05D005812 ORTHO05D007232 5.0e-100 367.9 194 100.0
Peaxi162Scf00611g00015 Petunia axillaris HOM05D005812 ORTHO05D007232 3.0e-65 252.3 176 73.9
Nitab4.5_0000083g0250 Nicotiana tabacum HOM05D005812 ORTHO05D007232 3.8e-52 208.8 178 61.2
Nitab4.5_0004651g0010 Nicotiana tabacum HOM05D005812 ORTHO05D007232 1.6e-50 203.4 175 60.0
Peaxi162Scf00212g00413 Petunia axillaris HOM05D005812 ORTHO05D007232 2.8e-50 202.6 177 59.9
Sopen04g025100 Solanum pennellii HOM05D005812 ORTHO05D007232 2.7e-45 186.0 173 57.2
Solyc04g055250.4 Solanum lycopersicum HOM05D005812 ORTHO05D007232 1.0e-44 184.1 173 56.6
CAN.G18.15 Capsicum annuum HOM05D005812 ORTHO05D007232 3.7e-39 165.6 153 58.2
Oeu051807.1 Olea europaea HOM05D005812 ORTHO05D007232 1.1e-38 164.1 155 56.8
CAN.G18.16 Capsicum annuum HOM05D005812 ORTHO05D007232 1.4e-38 163.7 153 58.8
PGSC0003DMG400001876 Solanum tuberosum HOM05D005812 ORTHO05D007232 3.2e-38 162.5 155 55.5
MSTRG.3778 Avicennia marina HOM05D005812 ORTHO05D007232 7.8e-37 157.9 179 52.5
Cc07_g15160 Coffea canephora HOM05D005812 ORTHO05D007232 4.0e-33 145.6 173 49.7
Actinidia20016 Actinidia chinensis HOM05D005812 ORTHO05D007232 1.2e-32 144.1 174 47.7
MSTRG.2569 Avicennia marina HOM05D005812 ORTHO05D007232 2.0e-32 143.3 179 46.9
Migut.L00124 Erythranthe guttata HOM05D005812 ORTHO05D007232 1.7e-31 140.2 182 48.4
MSTRG.23345 Avicennia marina HOM05D005812 ORTHO05D007232 1.9e-30 136.7 180 46.7
Oeu001791.1 Olea europaea HOM05D005812 ORTHO05D007232 2.4e-30 136.3 132 54.5
Actinidia06567 Actinidia chinensis HOM05D005812 ORTHO05D007232 3.2e-30 136.0 174 45.4
MSTRG.15713 Avicennia marina HOM05D005812 ORTHO05D007232 3.2e-30 136.0 179 46.4
GSVIVG01002272001 Vitis vinifera HOM05D005812 ORTHO05D007232 4.1e-30 135.6 184 44.6
Dinv21904 Davidia involucrata HOM05D005812 ORTHO05D007232 5.4e-30 135.2 178 48.3
DCAR_014222 Daucus carota HOM05D005812 ORTHO05D007232 1.2e-29 134.0 181 45.3
SalBow5G0456 Salvia bowleyana HOM05D005812 ORTHO05D007232 1.3e-28 130.6 205 38.5
Lsat_1_v5_gn_4_141220 Lactuca sativa HOM05D005812 ORTHO05D007232 2.3e-28 129.8 178 49.4
Dinv13192 Davidia involucrata HOM05D005812 ORTHO05D007232 6.6e-28 128.3 158 48.1
ECA232G1467 Erigeron canadensis HOM05D005812 ORTHO05D007232 3.6e-26 122.5 173 46.2
DCAR_010089 Daucus carota HOM05D005812 ORTHO05D007232 1.7e-23 113.6 165 40.0
SalBow5G2541 Salvia bowleyana HOM05D005812 ORTHO05D007232 1.7e-23 113.6 149 43.6
TAR628G0897 Trochodendron aralioides HOM05D005812 ORTHO05D007232 1.7e-23 113.6 174 41.4
Actinidia28235 Actinidia chinensis HOM05D005812 ORTHO05D007232 2.9e-23 112.8 178 39.9
Eucgr.H04782 Eucalyptus grandis HOM05D005812 ORTHO05D007232 4.9e-23 112.1 182 38.5
PGR102G1433 Punica granatum HOM05D005812 ORTHO05D007232 6.4e-23 111.7 183 38.3
ClCG10G008980 Citrullus lanatus HOM05D005812 ORTHO05D007232 1.9e-22 110.2 166 39.8
Prupe.6G187400 Prunus persica HOM05D005812 ORTHO05D007232 3.2e-22 109.4 179 40.2
ECA232G0795 Erigeron canadensis HOM05D005812 ORTHO05D007232 5.4e-22 108.6 180 40.6
HanXRQChr10g0305381 Helianthus annuus HOM05D005812 ORTHO05D007232 7.1e-22 108.2 170 42.9
Hma1.2p1_1428F.1_g282935 Hydrangea macrophylla HOM05D005812 ORTHO05D007232 7.1e-22 108.2 176 40.9
Nn5g30114 Nelumbo nucifera HOM05D005812 ORTHO05D007232 7.1e-22 108.2 183 37.7
MD15G1323600 Malus domestica HOM05D005812 ORTHO05D007232 9.2e-22 107.8 171 41.5
Sed0017830 Sechium edule HOM05D005812 ORTHO05D007232 9.2e-22 107.8 173 38.2
AUR62003797 Chenopodium quinoa HOM05D005812 ORTHO05D007232 1.2e-21 107.5 125 46.4
Gohir.D11G221400 Gossypium hirsutum HOM05D005812 ORTHO05D007232 2.7e-21 106.3 182 40.1
Gorai.007G238400 Gossypium raimondii HOM05D005812 ORTHO05D007232 2.7e-21 106.3 182 40.1
CiPaw.04G099800 Carya illinoinensis HOM05D005812 ORTHO05D007232 4.6e-21 105.5 191 39.3
AUR62002005 Chenopodium quinoa HOM05D005812 ORTHO05D007232 4.6e-21 105.5 135 45.2
Lj2C549G6 Lonicera japonica HOM05D005812 ORTHO05D007232 4.6e-21 105.5 108 50.9
Potri.007G093200 Populus trichocarpa HOM05D005812 ORTHO05D007232 6.0e-21 105.1 154 40.3
Duzib264G1072 Durio zibethinus HOM05D005812 ORTHO05D007232 7.8e-21 104.8 179 39.7
Rhsim08G0010800 Rhododendron simsii HOM05D005812 ORTHO05D007232 1.3e-20 104.0 185 38.9
vmacro18598 Vaccinium macrocarpon HOM05D005812 ORTHO05D007232 2.3e-20 103.2 186 40.3
Duzib187G0152 Durio zibethinus HOM05D005812 ORTHO05D007232 3.0e-20 102.8 182 38.5
Gohir.A11G201100 Gossypium hirsutum HOM05D005812 ORTHO05D007232 3.0e-20 102.8 212 36.8
RcHm_v2.0_Chr2g0113441 Rosa chinensis HOM05D005812 ORTHO05D007232 3.0e-20 102.8 160 40.6
HanXRQChr05g0145211 Helianthus annuus HOM05D005812 ORTHO05D007232 3.9e-20 102.4 143 46.9
HanXRQChr09g0254761 Helianthus annuus HOM05D005812 ORTHO05D007232 3.9e-20 102.4 177 42.9
Thecc.01G101100 Theobroma cacao HOM05D005812 ORTHO05D007232 5.1e-20 102.1 179 40.2
Lalb_Chr23g0277481 Lupinus albus HOM05D005812 ORTHO05D007232 8.6e-20 101.3 178 38.8
Lj6g0021205 Lotus japonicus HOM05D005812 ORTHO05D007232 1.5e-19 100.5 158 38.6
Duzib147G1550 Durio zibethinus HOM05D005812 ORTHO05D007232 4.3e-19 99.0 179 40.2
FvH4_1g20820 Fragaria vesca HOM05D005812 ORTHO05D007232 5.6e-19 98.6 180 40.0
Glyma.11G240400 Glycine max HOM05D005812 ORTHO05D007232 9.6e-19 97.8 179 40.2
MBI02_g31269_MAGBIO Magnolia biondii HOM05D005812 ORTHO05D007232 1.2e-18 97.4 176 37.5
Nn1g05352 Nelumbo nucifera HOM05D003496 ORTHO05D003909 1.2e-18 97.4 178 38.2
unitig_88.g27721 Utricularia gibba HOM05D005812 ORTHO05D007232 1.2e-18 97.4 173 41.6
Glyma.18G016900 Glycine max HOM05D005812 ORTHO05D007232 1.6e-18 97.1 179 40.2
TPR.G17850 Trifolium pratense HOM05D005812 ORTHO05D007232 1.6e-18 97.1 178 35.4
Psat5g090240 Pisum sativum HOM05D005812 ORTHO05D007232 2.8e-18 96.3 154 39.0
Hund16289 Selenicereus undatus HOM05D005812 ORTHO05D007232 3.6e-18 95.9 162 38.9
CiPaw.03G142200 Carya illinoinensis HOM05D005812 ORTHO05D007232 1.4e-17 94.0 164 37.2
Atru.chr4.60 Acer truncatum HOM05D005812 ORTHO05D007232 1.8e-17 93.6 182 34.6
Cpa.g.sc230.1 Carica papaya HOM05D005812 ORTHO05D007232 1.8e-17 93.6 181 36.5
Cfa002656 Carpinus fangiana HOM05D005812 ORTHO05D007232 1.8e-17 93.6 176 38.1
Ciclev10026269m.g Citrus clementina HOM05D005812 ORTHO05D007232 4.0e-17 92.4 180 37.2
Gohir.A12G083366 Gossypium hirsutum HOM05D005812 ORTHO05D007232 5.2e-17 92.0 172 36.6
Ah.02g122540 Amaranthus hybridus HOM05D005812 ORTHO05D007232 6.9e-17 91.7 129 41.1
Ca_16522_v3 Cicer arietinum L. HOM05D005812 ORTHO05D007232 6.9e-17 91.7 177 35.0
Gorai.008G090000 Gossypium raimondii HOM05D005812 ORTHO05D007232 1.2e-16 90.9 170 38.2
CANSAT01G0800 Cannabis sativa HOM05D005812 ORTHO05D007232 2.0e-16 90.1 149 36.9
QL06p049491 Quercus lobata HOM05D005812 ORTHO05D007232 2.6e-16 89.7 164 36.6
arahy.Tifrunner.gnm1.ann1.I4SKYX Arachis hypogaea HOM05D005812 ORTHO05D007232 4.4e-16 89.0 164 38.4
Gorai.011G113200 Gossypium raimondii HOM05D005812 ORTHO05D007232 4.4e-16 89.0 179 35.8
Gohir.A10G085300 Gossypium hirsutum HOM05D005812 ORTHO05D007232 5.8e-16 88.6 179 35.8
Phvul.001G252300 Phaseolus vulgaris HOM05D005812 ORTHO05D007232 9.9e-16 87.8 178 36.5
Sc03g0002070 Simmondsia chinensis HOM05D005812 ORTHO05D007232 9.9e-16 87.8 161 34.8
CsaV3_4G008880 Cucumis sativus L. HOM05D005812 ORTHO05D007232 1.3e-15 87.4 128 41.4
Aqoxy6G00789 Aquilegia oxysepala HOM05D005812 ORTHO05D007232 1.7e-15 87.0 117 46.2
arahy.Tifrunner.gnm1.ann1.LSP3Z9 Arachis hypogaea HOM05D005812 ORTHO05D007232 1.7e-15 87.0 162 39.5
Manes.12G134500 Manihot esculenta HOM05D005812 ORTHO05D007232 1.7e-15 87.0 133 39.1
THA.LOC104807691 Tarenaya hassleriana HOM05D005812 ORTHO05D007232 1.7e-15 87.0 179 36.3
Medtr3g087150 Medicago truncatula HOM05D005812 ORTHO05D007232 3.8e-15 85.9 177 32.2
Gohir.D10G103600 Gossypium hirsutum HOM05D005812 ORTHO05D007232 4.9e-15 85.5 179 34.6
Thhalv10026058m.g Eutrema salsugineum HOM05D005812 ORTHO05D007232 6.4e-15 85.1 185 35.1
PSO541G0090 Papaver somniferum HOM05D005812 ORTHO05D007232 8.4e-15 84.7 178 33.7
Sp7g35990 Schrenkiella parvula HOM05D005812 ORTHO05D007232 1.1e-14 84.3 186 34.4
VMungo1383G2465 Vigna mungo HOM05D005812 ORTHO05D007232 1.1e-14 84.3 178 34.8
PSO781G0022 Papaver somniferum HOM05D005812 ORTHO05D007232 2.4e-14 83.2 122 41.8
Carub.0007s0184 Capsella rubella HOM05D005812 ORTHO05D007232 3.2e-14 82.8 182 34.1
A01p00790 Brassica napus HOM05D005812 ORTHO05D007232 7.1e-14 81.6 184 34.8
BraA01t00082Z Brassica rapa HOM05D005812 ORTHO05D007232 7.1e-14 81.6 184 34.8
AT4G39900 Arabidopsis thaliana HOM05D005812 ORTHO05D007232 9.3e-14 81.3 180 33.3
vmacro12958 Vaccinium macrocarpon HOM05D005812 ORTHO05D007232 1.2e-13 80.9 159 35.8
Manes.13G075600 Manihot esculenta HOM05D005812 ORTHO05D007232 2.1e-13 80.1 157 36.9
MELO3C018959.2 Cucumis melo HOM05D005812 ORTHO05D007232 3.5e-13 79.3 84 50.0
AL7G12150 Arabidopsis lyrata HOM05D005812 ORTHO05D007232 7.8e-13 78.2 180 32.8
A08p23250 Brassica napus HOM05D005812 ORTHO05D007232 1.0e-12 77.8 184 33.7
BraA08t34281Z Brassica rapa HOM05D005812 ORTHO05D007232 1.0e-12 77.8 184 33.7
BcaNung06391 Brassica carinata HOM05D005812 ORTHO05D007232 1.3e-12 77.4 183 33.9
BolC3t20101H Brassica oleracea HOM05D005812 ORTHO05D007232 1.7e-12 77.0 184 33.2
BcaC01g00328 Brassica carinata HOM05D005812 ORTHO05D007232 2.3e-12 76.6 184 33.2
C01p00910 Brassica napus HOM05D005812 ORTHO05D007232 3.0e-12 76.3 185 33.0
EL10Ac6g15110 Beta vulgaris HOM05D005812 ORTHO05D007232 3.9e-12 75.9 121 38.8
BcaB03g12290 Brassica carinata HOM05D005812 ORTHO05D007232 6.6e-12 75.1 181 31.5
CARHR246800 Cardamine hirsuta HOM05D005812 ORTHO05D007232 6.6e-12 75.1 180 33.3
C03p78490 Brassica napus HOM05D005812 ORTHO05D007232 8.7e-12 74.7 184 32.6
Haze_24926 Corylus avellana HOM05D005812 ORTHO05D007232 8.7e-12 74.7 153 34.0
HanXRQChr09g0255041 Helianthus annuus HOM05D005812 ORTHO05D007232 3.3e-11 72.8 100 46.0
BcaNung00911 Brassica carinata HOM05D005812 ORTHO05D007232 4.3e-11 72.4 185 32.4
unitig_32.g11811 Utricularia gibba HOM05D005812 ORTHO05D007232 1.6e-10 70.5 123 39.8
BcaNung00793 Brassica carinata HOM05D005812 ORTHO05D007232 3.6e-10 69.3 58 58.6
Oeu056609.1 Olea europaea HOM05D005812 ORTHO05D007232 3.6e-10 69.3 49 61.2
Ah.03g143620 Amaranthus hybridus HOM05D005812 ORTHO05D007232 1.4e-06 57.4 108 35.2


User provided reference genes

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