Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000893g0020 Nicotiana tabacum HOM05D003975 ORTHO05D009899 2.3e-40 168.3 78 100.0
Nitab4.5_0001135g0190 Nicotiana tabacum HOM05D003975 ORTHO05D009899 6.3e-38 160.2 78 94.9
CAN.G745.37 Capsicum annuum HOM05D003975 ORTHO05D009899 3.1e-37 157.9 78 91.0
PGSC0003DMG400019630 Solanum tuberosum HOM05D003975 ORTHO05D009899 4.1e-37 157.5 78 91.0
CAN.G745.38 Capsicum annuum HOM05D003975 ORTHO05D009899 1.2e-36 156.0 78 89.7
Solyc11g068810.2 Solanum lycopersicum HOM05D003975 ORTHO05D009899 1.6e-36 155.6 78 89.7
Sopen11g027530 Solanum pennellii HOM05D003975 ORTHO05D009899 1.6e-36 155.6 78 89.7
Peaxi162Scf00224g00092 Petunia axillaris HOM05D003975 ORTHO05D009899 7.7e-36 153.3 73 94.5
Hma1.2p1_0793F.1_g218650 Hydrangea macrophylla HOM05D003975 ORTHO05D009899 1.2e-33 146.0 78 82.1
GSVIVG01036058001 Vitis vinifera HOM05D003975 ORTHO05D009899 1.6e-33 145.6 78 80.8
CSS0027551 Camellia sinensis var. sinensis HOM05D003975 ORTHO05D009899 2.1e-33 145.2 78 82.1
Thecc.09G275700 Theobroma cacao HOM05D003975 ORTHO05D009899 2.1e-33 145.2 79 83.5
FAN21G0333 Fragaria x ananassa HOM05D004708 ORTHO05D005573 2.7e-33 144.8 78 82.1
FAN11G2897 Fragaria x ananassa HOM05D004708 ORTHO05D009899 3.6e-33 144.4 78 82.1
RcHm_v2.0_Chr5g0047291 Rosa chinensis HOM05D003975 ORTHO05D009899 4.7e-33 144.1 78 80.8
MELO3C014515.2 Cucumis melo HOM05D003975 ORTHO05D009899 6.1e-33 143.7 78 83.3
Thecc.09G155000 Theobroma cacao HOM05D003975 ORTHO05D009899 8.0e-33 143.3 79 82.3
ClCG02G022390 Citrullus lanatus HOM05D003975 ORTHO05D009899 1.0e-32 142.9 81 80.2
Sed0002680 Sechium edule HOM05D003975 ORTHO05D009899 1.0e-32 142.9 80 81.2
Cc01_g08600 Coffea canephora HOM05D003975 ORTHO05D009899 1.4e-32 142.5 81 80.2
Gorai.001G124000 Gossypium raimondii HOM05D003975 ORTHO05D009899 1.4e-32 142.5 79 82.3
SalBow6G3564 Salvia bowleyana HOM05D003975 ORTHO05D009899 1.8e-32 142.1 79 78.5
Atru.chr3.3141 Acer truncatum HOM05D003975 ORTHO05D009899 2.3e-32 141.7 78 80.8
Dinv08130 Davidia involucrata HOM05D003975 ORTHO05D009899 3.0e-32 141.4 78 78.2
Eucgr.J00540 Eucalyptus grandis HOM05D003975 ORTHO05D009899 4.0e-32 141.0 78 78.2
Gohir.D07G115700 Gossypium hirsutum HOM05D003975 ORTHO05D009899 4.0e-32 141.0 79 81.0
Duzib150G1666 Durio zibethinus HOM05D003975 ORTHO05D009899 8.8e-32 139.8 79 81.0
MD03G1152900 Malus domestica HOM05D003975 ORTHO05D009899 1.2e-31 139.4 78 79.5
Gohir.A07G112200 Gossypium hirsutum HOM05D003975 ORTHO05D009899 4.4e-31 137.5 79 79.7
QL01p011344 Quercus lobata HOM05D003975 ORTHO05D009899 9.8e-31 136.3 78 75.6
Migut.D02414 Erythranthe guttata HOM05D003975 ORTHO05D009899 1.3e-30 136.0 79 77.2
Cfa009967 Carpinus fangiana HOM05D003975 ORTHO05D009899 2.2e-30 135.2 79 74.7
DCAR_013070 Daucus carota HOM05D003975 ORTHO05D009899 2.2e-30 135.2 80 75.0
CANSAT54G1521 Cannabis sativa HOM05D003975 ORTHO05D009899 4.8e-30 134.0 76 75.0
Haze_23328 Corylus avellana HOM05D003975 ORTHO05D009899 4.8e-30 134.0 79 74.7
Prupe.6G140000 Prunus persica HOM05D003975 ORTHO05D009899 6.3e-30 133.7 78 74.4
TWI31G0968 Tripterygium wilfordii HOM05D003975 ORTHO05D009899 6.3e-30 133.7 83 74.7
COL.COLO4_22656 Corchorus olitorius HOM05D003975 ORTHO05D009899 1.1e-29 132.9 86 72.1
TAR633G2299 Trochodendron aralioides HOM05D003975 ORTHO05D009899 1.8e-29 132.1 72 77.8
CsaV3_6G038520 Cucumis sativus L. HOM05D003975 ORTHO05D009899 3.1e-29 131.3 73 78.1
Nn6g34748 Nelumbo nucifera HOM05D003975 ORTHO05D009899 3.1e-29 131.3 81 70.4
MBI01_g04527_MAGBIO Magnolia biondii HOM05D003975 ORTHO05D009899 4.1e-29 131.0 78 66.7
Sabra04G0136000 Salix brachista HOM05D003975 ORTHO05D009762 3.5e-28 127.9 85 68.2
unitig_0.g1469 Utricularia gibba HOM05D003975 ORTHO05D009899 4.5e-28 127.5 79 72.2
PSO339G0200 Papaver somniferum HOM05D003975 ORTHO05D009899 5.9e-28 127.1 81 66.7
PSO384G0061 Papaver somniferum HOM05D003975 ORTHO05D009899 5.9e-28 127.1 81 66.7
Potri.004G201000 Populus trichocarpa HOM05D003975 ORTHO05D009899 1.3e-27 125.9 85 69.4
Lalb_Chr09g0335081 Lupinus albus HOM05D003975 ORTHO05D009899 2.2e-27 125.2 79 72.2
AUR62011465 Chenopodium quinoa HOM05D003975 ORTHO05D009899 2.9e-27 124.8 78 66.7
Glyma.08G290000 Glycine max HOM05D003975 ORTHO05D009899 2.9e-27 124.8 78 70.5
Potri.009G162200 Populus trichocarpa HOM05D003975 ORTHO05D009899 3.8e-27 124.4 85 67.1
Lsat_1_v5_gn_2_56181 Lactuca sativa HOM05D000240 ORTHO05D001153 8.5e-27 123.2 81 66.7
ECA238G1997 Erigeron canadensis HOM05D003975 ORTHO05D009899 1.1e-26 122.9 78 69.2
HanXRQChr09g0248811 Helianthus annuus HOM05D003975 ORTHO05D009899 1.5e-26 122.5 75 66.7
arahy.Tifrunner.gnm1.ann1.QQFJ2J Arachis hypogaea HOM05D003975 ORTHO05D009899 1.9e-26 122.1 79 69.6
arahy.Tifrunner.gnm1.ann1.V52YDZ Arachis hypogaea HOM05D003975 ORTHO05D009899 1.9e-26 122.1 79 69.6
ATR0772G086 Amborella trichopoda HOM05D003975 ORTHO05D009899 2.5e-26 121.7 83 63.9
Sabra15G0053200 Salix brachista HOM05D003975 ORTHO05D009899 2.5e-26 121.7 87 63.2
Sabra15G0046300 Salix brachista HOM05D003975 ORTHO05D009899 3.2e-26 121.3 86 64.0
Sabra15G0052000 Salix brachista HOM05D003975 ORTHO05D009899 3.2e-26 121.3 86 64.0
Sabra15G0053900 Salix brachista HOM05D003975 ORTHO05D009899 3.2e-26 121.3 86 64.0
Aqoxy4G02677 Aquilegia oxysepala HOM05D003975 ORTHO05D009899 7.2e-26 120.2 85 62.4
Sabra09G0126700 Salix brachista HOM05D003975 ORTHO05D009762 9.4e-26 119.8 85 63.5
Sabra15G0031600 Salix brachista HOM05D003975 ORTHO05D009899 9.4e-26 119.8 85 63.5
Sabra15G0048400 Salix brachista HOM05D003975 ORTHO05D009899 9.4e-26 119.8 85 63.5
Sabra15G0060100 Salix brachista HOM05D003975 ORTHO05D009899 9.4e-26 119.8 85 63.5
Glyma.18G134500 Glycine max HOM05D003975 ORTHO05D009899 1.2e-25 119.4 78 66.7
THA.LOC104799562 Tarenaya hassleriana HOM05D003975 ORTHO05D009899 1.2e-25 119.4 80 67.5
Ciclev10029713m.g Citrus clementina HOM05D003975 ORTHO05D009899 1.6e-25 119.0 83 67.5
BcaC04g19558 Brassica carinata HOM05D003975 ORTHO05D009899 2.1e-25 118.6 81 66.7
C09p54430 Brassica napus HOM05D003975 ORTHO05D009899 2.1e-25 118.6 81 66.7
BolC9t58312H Brassica oleracea HOM05D003975 ORTHO05D009899 2.1e-25 118.6 81 66.7
AUR62016590 Chenopodium quinoa HOM05D003975 ORTHO05D009899 2.1e-25 118.6 78 64.1
A10p18580 Brassica napus HOM05D003975 ORTHO05D009899 2.7e-25 118.2 81 66.7
Sc03g0003650 Simmondsia chinensis HOM05D003975 ORTHO05D009899 4.7e-25 117.5 78 65.4
Phvul.003G054000 Phaseolus vulgaris HOM05D003975 ORTHO05D009899 6.1e-25 117.1 78 65.4
BraA10t43938Z Brassica rapa HOM05D003975 ORTHO05D009899 2.3e-24 115.2 81 65.4
CARHR191340 Cardamine hirsuta HOM05D003975 ORTHO05D009899 4.0e-24 114.4 81 66.7
Sp6g23020 Schrenkiella parvula HOM05D003975 ORTHO05D009899 4.0e-24 114.4 81 66.7
AT5G22210 Arabidopsis thaliana HOM05D003975 ORTHO05D009899 5.2e-24 114.0 81 66.7
Ah.01g020290 Amaranthus hybridus HOM05D003975 ORTHO05D009899 1.5e-23 112.5 80 63.8
BcaB08g36448 Brassica carinata HOM05D003975 ORTHO05D009899 2.6e-23 111.7 81 64.2
Carub.0006s1995 Capsella rubella HOM05D003975 ORTHO05D009899 4.4e-23 110.9 81 64.2
AL6G33210 Arabidopsis lyrata HOM05D003975 ORTHO05D009899 5.7e-23 110.5 81 65.4
EL10Ac9g21860 Beta vulgaris HOM05D003975 ORTHO05D009899 9.8e-23 109.8 79 63.3
TAR268G0001 Trochodendron aralioides HOM05D001423 ORTHO05D001412 5.4e-21 104.0 71 64.8
HPP92_009773 Vanilla planifolia HOM05D000917 ORTHO05D009899 5.4e-21 104.0 80 52.5
HPP92_009742 Vanilla planifolia HOM05D000917 ORTHO05D000764 3.5e-20 101.3 81 51.9
MBI04_g20761_MAGBIO Magnolia biondii HOM05D003975 ORTHO05D009899 2.6e-07 58.5 47 44.7
SEGI_31848 Sequoiadendron giganteum HOM05D003975 ORTHO05D009899 8.3e-06 53.5 47 48.9


User provided reference genes

Program Settings