Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000892g0120 Nicotiana tabacum HOM05D006965 ORTHO05D008652 1.8e-229 798.9 396 100.0
Nitab4.5_0004592g0020 Nicotiana tabacum HOM05D006965 ORTHO05D008652 6.0e-193 677.6 352 95.2
PGSC0003DMG400006312 Solanum tuberosum HOM05D006965 ORTHO05D008652 1.7e-171 606.3 349 85.1
CAN.G261.10 Capsicum annuum HOM05D006965 ORTHO05D008652 1.1e-167 593.6 351 82.3
Sopen01g033500 Solanum pennellii HOM05D006965 ORTHO05D008652 6.2e-166 587.8 349 82.8
Solyc01g073930.3 Solanum lycopersicum HOM05D006965 ORTHO05D008652 1.1e-165 587.0 349 83.4
Cc02_g27080 Coffea canephora HOM05D006965 ORTHO05D008652 6.5e-131 471.5 356 63.5
CSS0026631 Camellia sinensis var. sinensis HOM05D006965 ORTHO05D008652 8.5e-131 471.1 347 67.4
Ciclev10031978m.g Citrus clementina HOM05D006965 ORTHO05D008652 3.2e-130 469.2 349 64.8
Actinidia32338 Actinidia chinensis HOM05D006965 ORTHO05D008652 9.7e-127 457.6 349 64.8
QL04p003153 Quercus lobata HOM05D006965 ORTHO05D008652 1.7e-126 456.8 347 65.1
QL04p000072 Quercus lobata HOM05D006965 ORTHO05D008652 2.2e-126 456.4 345 65.2
Atru.chr11.2694 Acer truncatum HOM05D006965 ORTHO05D008652 3.7e-126 455.7 349 64.2
Manes.10G151000 Manihot esculenta HOM05D006965 ORTHO05D008652 6.3e-126 454.9 347 64.0
RcHm_v2.0_Chr1g0313421 Rosa chinensis HOM05D006965 ORTHO05D008652 1.1e-125 454.1 345 63.8
Phvul.005G039600 Phaseolus vulgaris HOM05D006965 ORTHO05D008652 1.4e-125 453.8 347 64.6
QL04p003146 Quercus lobata HOM05D006965 ORTHO05D008652 5.3e-125 451.8 347 65.4
Thecc.01G416200 Theobroma cacao HOM05D006965 ORTHO05D008652 5.3e-125 451.8 361 60.7
TAR633G1267 Trochodendron aralioides HOM05D006965 ORTHO05D008652 5.3e-125 451.8 347 64.8
Cfa004805 Carpinus fangiana HOM05D006965 ORTHO05D008652 1.5e-124 450.3 345 63.8
Potri.009G023200 Populus trichocarpa HOM05D006965 ORTHO05D008652 1.3e-123 447.2 347 62.0
Lj3g0017203 Lotus japonicus HOM05D006965 ORTHO05D008652 1.7e-123 446.8 349 63.9
CiPaw.13G000900 Carya illinoinensis HOM05D006965 ORTHO05D008652 2.2e-123 446.4 347 62.5
vmacro13617 Vaccinium macrocarpon HOM05D006965 ORTHO05D008652 5.0e-123 445.3 353 61.8
Sabra09G0014600 Salix brachista HOM05D006965 ORTHO05D008652 8.5e-123 444.5 347 61.7
MD07G1002700 Malus domestica HOM05D006965 ORTHO05D008652 1.9e-122 443.4 363 60.3
Haze_10398 Corylus avellana HOM05D006965 ORTHO05D008652 4.2e-122 442.2 352 61.6
FAN01G2144 Fragaria x ananassa HOM05D006965 ORTHO05D008652 1.4e-120 437.2 345 61.2
Gohir.A08G026760 Gossypium hirsutum HOM05D006965 ORTHO05D008652 5.2e-120 435.3 350 59.4
Haze_10419 Corylus avellana HOM05D006965 ORTHO05D008652 8.8e-120 434.5 338 62.4
Haze_10424 Corylus avellana HOM05D006965 ORTHO05D008652 8.8e-120 434.5 338 62.4
MSTRG.17063 Avicennia marina HOM05D006965 ORTHO05D008652 1.1e-119 434.1 351 61.8
TPR.G11733 Trifolium pratense HOM05D006965 ORTHO05D008652 1.1e-119 434.1 347 61.4
GSVIVG01001368001 Vitis vinifera HOM05D006965 ORTHO05D008652 1.1e-119 434.1 321 66.4
MD02G1318500 Malus domestica HOM05D006965 ORTHO05D008652 2.6e-119 433.0 349 60.2
Gorai.004G035500 Gossypium raimondii HOM05D006965 ORTHO05D008652 5.7e-119 431.8 350 59.1
Glyma.08G149400 Glycine max HOM05D006965 ORTHO05D008652 7.4e-119 431.4 348 62.4
Gohir.D08G037500 Gossypium hirsutum HOM05D006965 ORTHO05D008652 7.4e-119 431.4 350 58.9
FvH4_7g00170 Fragaria vesca HOM05D006965 ORTHO05D008652 1.3e-118 430.6 363 58.4
Nn2g15664 Nelumbo nucifera HOM05D006965 ORTHO05D008652 2.4e-117 426.4 350 62.0
Sc12g0002350 Simmondsia chinensis HOM05D006965 ORTHO05D008652 1.2e-116 424.1 346 60.1
CANSAT78G1981 Cannabis sativa HOM05D006965 ORTHO05D008652 4.5e-116 422.2 348 58.6
ECA248G1794 Erigeron canadensis HOM05D006965 ORTHO05D008652 5.9e-116 421.8 347 60.2
THA.LOC104827577 Tarenaya hassleriana HOM05D006965 ORTHO05D008652 5.9e-116 421.8 348 57.8
Migut.B01364 Erythranthe guttata HOM05D006965 ORTHO05D008652 1.0e-115 421.0 344 60.8
Psat1g128200 Pisum sativum HOM05D006965 ORTHO05D008652 2.2e-115 419.9 347 59.7
Lalb_Chr25g0283521 Lupinus albus HOM05D006965 ORTHO05D008652 2.9e-115 419.5 347 58.8
Rhsim07G0050600 Rhododendron simsii HOM05D006965 ORTHO05D008652 3.8e-115 419.1 331 60.1
CsaV3_3G032450 Cucumis sativus L. HOM05D006965 ORTHO05D008652 6.5e-115 418.3 347 58.8
TWI73G0408 Tripterygium wilfordii HOM05D006965 ORTHO05D008652 6.5e-115 418.3 354 59.9
AUR62012162 Chenopodium quinoa HOM05D006965 ORTHO05D008652 1.9e-114 416.8 344 60.8
AL4G43420 Arabidopsis lyrata HOM05D006965 ORTHO05D008652 3.2e-114 416.0 348 57.2
MBI04_g33895_MAGBIO Magnolia biondii HOM05D006965 ORTHO05D008652 2.1e-113 413.3 373 57.4
SalBow5G3371 Salvia bowleyana HOM05D006965 ORTHO05D008652 2.1e-113 413.3 320 62.2
ClCG10G012640 Citrullus lanatus HOM05D006965 ORTHO05D008652 1.0e-112 411.0 355 57.2
VMungo1080G1640 Vigna mungo HOM05D006965 ORTHO05D008652 1.4e-112 410.6 330 61.2
PSO339G5860 Papaver somniferum HOM05D006965 ORTHO05D008652 6.7e-112 408.3 347 57.9
Ca_02931_v3 Cicer arietinum L. HOM05D006965 ORTHO05D008652 2.0e-111 406.8 325 60.3
Eucgr.G02572 Eucalyptus grandis HOM05D006965 ORTHO05D008652 2.6e-111 406.4 348 56.9
FAN06G0111 Fragaria x ananassa HOM05D006965 ORTHO05D008652 9.7e-111 404.4 347 57.9
TAR362G1148 Trochodendron aralioides HOM05D006965 ORTHO05D008652 9.7e-111 404.4 314 65.6
FAN10G4273 Fragaria x ananassa HOM05D006965 ORTHO05D008652 1.3e-110 404.1 361 56.2
Sed0016917 Sechium edule HOM05D006965 ORTHO05D008652 1.3e-110 404.1 348 57.2
Medtr2g060820 Medicago truncatula HOM05D006965 ORTHO05D008652 2.2e-110 403.3 323 59.4
PSO384G4145 Papaver somniferum HOM05D006965 ORTHO05D008652 2.2e-110 403.3 347 57.1
Thhalv10001527m.g Eutrema salsugineum HOM05D006965 ORTHO05D008652 4.8e-110 402.1 346 54.9
BcaB02g08813 Brassica carinata HOM05D006965 ORTHO05D008652 6.3e-110 401.7 347 55.3
Aa31LG1G25970 Aethionema arabicum HOM05D006965 ORTHO05D008652 1.1e-109 401.0 363 53.2
BcaC02g12316 Brassica carinata HOM05D006965 ORTHO05D008652 4.1e-109 399.1 346 54.9
C04p05300 Brassica napus HOM05D006965 ORTHO05D008652 4.1e-109 399.1 374 52.9
SGA_v2.0_scaffold5G03114 Striga asiatica HOM05D006965 ORTHO05D008652 2.0e-108 396.7 344 58.1
MELO3C023943.2 Cucumis melo HOM05D006965 ORTHO05D008652 2.7e-108 396.4 347 57.3
Hund16040 Selenicereus undatus HOM05D006965 ORTHO05D008652 4.5e-108 395.6 340 59.4
Carub.0004s2700 Capsella rubella HOM05D006965 ORTHO05D008652 1.0e-107 394.4 348 54.6
A05p04570 Brassica napus HOM05D006965 ORTHO05D008652 2.2e-107 393.3 348 54.9
Aqoxy1G00028 Aquilegia oxysepala HOM05D006965 ORTHO05D008652 8.5e-107 391.3 345 55.7
AT2G44420 Arabidopsis thaliana HOM05D006965 ORTHO05D008652 1.1e-106 391.0 377 52.3
Sp4g26490 Schrenkiella parvula HOM05D006965 ORTHO05D008652 1.5e-106 390.6 346 53.8
BraA05t19431Z Brassica rapa HOM05D006965 ORTHO05D008652 2.5e-106 389.8 355 54.1
AUR62022798 Chenopodium quinoa HOM05D006965 ORTHO05D008652 2.5e-106 389.8 346 58.1
Peaxi162Scf00878g00321 Petunia axillaris HOM05D006965 ORTHO05D008652 4.2e-106 389.0 267 75.7
BolC4t22170H Brassica oleracea HOM05D006965 ORTHO05D008652 3.6e-105 386.0 370 51.4
Prupe.2G004200 Prunus persica HOM05D006965 ORTHO05D008652 5.7e-103 378.6 278 64.0
PGR004G0492 Punica granatum HOM05D006965 ORTHO05D008652 7.5e-103 378.3 324 59.0
Dinv43490 Davidia involucrata HOM05D006965 ORTHO05D008652 4.1e-101 372.5 274 68.2
FAN01G0465 Fragaria x ananassa HOM05D006965 ORTHO05D008652 7.7e-100 368.2 340 54.7
HanXRQChr01g0018681 Helianthus annuus HOM05D006965 ORTHO05D008652 1.9e-98 363.6 344 54.7
Hma1.2p1_2998F.1_g331493 Hydrangea macrophylla HOM05D006965 ORTHO05D008652 5.5e-98 362.1 255 69.4
Hma1.2p1_2998F.1_g331496 Hydrangea macrophylla HOM05D006965 ORTHO05D008652 9.5e-98 361.3 252 69.8
ATR0605G047 Amborella trichopoda HOM05D006965 ORTHO05D008652 1.3e-91 340.9 349 49.9
unitig_26.g9594 Utricularia gibba HOM05D001227 ORTHO05D001082 2.3e-91 340.1 360 52.2
EL10Ac2g04673 Beta vulgaris HOM05D006965 ORTHO05D008652 1.1e-90 337.8 313 56.9
Zm00001eb275720 Zea mays HOM05D006965 ORTHO05D008652 7.3e-90 335.1 336 50.9
Os06g0618150 Oryza sativa ssp. japonica HOM05D006965 ORTHO05D008652 3.1e-88 329.7 327 51.1
Ah.16g102760 Amaranthus hybridus HOM05D006965 ORTHO05D008652 5.2e-88 328.9 344 50.6
Lsat_1_v5_gn_1_110081 Lactuca sativa HOM05D006965 ORTHO05D008652 1.3e-86 324.3 310 55.5
Duzib114G0529 Durio zibethinus HOM05D006965 ORTHO05D008652 6.0e-84 315.5 349 47.0
FAN03G0167 Fragaria x ananassa HOM05D006965 ORTHO05D008652 1.2e-81 307.8 287 55.7
COL.COLO4_23913 Corchorus olitorius HOM05D006280 ORTHO05D008652 8.0e-81 305.1 241 60.6
CDE05G0249 Ceratophyllum demersum HOM05D006965 ORTHO05D008652 1.2e-76 291.2 261 55.2
HPP92_002651 Vanilla planifolia HOM05D006965 ORTHO05D008652 1.3e-67 261.2 236 53.4
DCAR_029603 Daucus carota HOM05D006965 ORTHO05D008652 4.3e-66 256.1 313 46.3
Cfa022003 Carpinus fangiana HOM05D006965 ORTHO05D008652 7.3e-66 255.4 221 58.8
CARHR139580 Cardamine hirsuta HOM05D006965 ORTHO05D008652 4.4e-63 246.1 185 56.8
arahy.Tifrunner.gnm1.ann1.Z1UMC7 Arachis hypogaea HOM05D006965 ORTHO05D008652 6.4e-62 242.3 217 59.4
Mapoly0087s0073 Marchantia polymorpha HOM05D006965 ORTHO05D008652 8.4e-62 241.9 355 38.6
arahy.Tifrunner.gnm1.ann1.ZJD8NP Arachis hypogaea HOM05D006965 ORTHO05D008652 2.4e-56 223.8 245 51.4
Eucgr.L03457 Eucalyptus grandis HOM05D006965 ORTHO05D008652 1.1e-45 188.3 130 60.8
SEGI_12556 Sequoiadendron giganteum HOM05D006965 ORTHO05D008652 5.3e-40 169.5 126 63.5
SMO132G0001 Selaginella moellendorffii HOM05D006965 ORTHO05D008652 4.6e-36 156.4 310 36.1
Haze_10414 Corylus avellana HOM05D006965 ORTHO05D008652 1.2e-31 141.7 100 64.0
Oeu009369.1 Olea europaea HOM05D006965 ORTHO05D008652 4.2e-29 133.3 144 46.5
SMO147G0191 Selaginella moellendorffii HOM05D020017 ORTHO05D022314 1.6e-25 121.3 219 36.5
Cpa.g.sc189.20 Carica papaya HOM05D006965 ORTHO05D008652 2.8e-17 94.0 75 56.0
CBR_g34612 Chara braunii HOM05D006965 ORTHO05D008652 3.8e-14 83.6 198 31.3
TPR.G14363 Trifolium pratense HOM05D006965 ORTHO05D008652 1.1e-13 82.0 70 54.3
Cpa.g.sc189.19 Carica papaya HOM05D006965 ORTHO05D008652 8.8e-11 72.4 87 49.4


User provided reference genes

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