Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000890g0130 Nicotiana tabacum HOM05D006134 ORTHO05D007671 3.5e-73 278.1 132 100.0
CAN.G181.11 Capsicum annuum HOM05D006134 ORTHO05D007671 1.5e-63 246.1 132 90.2
Nitab4.5_0000101g0190 Nicotiana tabacum HOM05D006134 ORTHO05D007671 4.3e-63 244.6 132 89.4
Solyc06g007480.3 Solanum lycopersicum HOM05D006134 ORTHO05D007671 7.3e-63 243.8 132 88.6
Sopen06g002390 Solanum pennellii HOM05D006134 ORTHO05D007671 2.8e-62 241.9 132 87.9
PGSC0003DMG400020551 Solanum tuberosum HOM05D006134 ORTHO05D007671 6.2e-62 240.7 132 87.9
Peaxi162Scf00359g00813 Petunia axillaris HOM05D006134 ORTHO05D007671 8.1e-62 240.4 132 85.6
Atru.chr9.1880 Acer truncatum HOM05D006134 ORTHO05D007671 7.1e-58 227.3 132 81.1
Cc02_g30030 Coffea canephora HOM05D006134 ORTHO05D007671 1.2e-57 226.5 132 80.3
arahy.Tifrunner.gnm1.ann1.A6PCA1 Arachis hypogaea HOM05D006134 ORTHO05D007671 2.7e-57 225.3 132 80.3
HanXRQChr12g0383651 Helianthus annuus HOM05D006134 ORTHO05D007671 2.7e-57 225.3 132 81.1
VMungo1080G1627 Vigna mungo HOM05D006134 ORTHO05D007671 2.7e-57 225.3 132 80.3
Lalb_Chr10g0093471 Lupinus albus HOM05D006134 ORTHO05D007671 3.5e-57 224.9 132 79.5
Lalb_Chr10g0093491 Lupinus albus HOM05D006134 ORTHO05D007671 3.5e-57 224.9 132 79.5
CSS0024749 Camellia sinensis var. sinensis HOM05D006134 ORTHO05D007671 4.6e-57 224.6 132 78.8
CSS0037732 Camellia sinensis var. sinensis HOM05D006134 ORTHO05D007671 4.6e-57 224.6 132 78.8
Ciclev10029589m.g Citrus clementina HOM05D006134 ORTHO05D007671 4.6e-57 224.6 132 79.5
CiPaw.10G137600 Carya illinoinensis HOM05D006134 ORTHO05D007671 7.9e-57 223.8 132 78.8
CSS0027024 Camellia sinensis var. sinensis HOM05D006134 ORTHO05D007671 1.3e-56 223.0 132 78.0
Psat5g110600 Pisum sativum HOM05D006134 ORTHO05D007671 2.3e-56 222.2 132 78.0
SGA_v2.0_scaffold207G41895 Striga asiatica HOM05D006134 ORTHO05D007671 2.3e-56 222.2 132 82.6
Glyma.11G156931 Glycine max HOM05D006134 ORTHO05D007671 3.0e-56 221.9 132 78.8
arahy.Tifrunner.gnm1.ann1.PD8D7M Arachis hypogaea HOM05D006134 ORTHO05D007671 3.9e-56 221.5 132 79.5
AUR62021421 Chenopodium quinoa HOM05D006134 ORTHO05D007671 6.7e-56 220.7 132 80.3
Haze_00699 Corylus avellana HOM05D006134 ORTHO05D007671 6.7e-56 220.7 132 78.0
Ah.01g023220 Amaranthus hybridus HOM05D006134 ORTHO05D007671 1.1e-55 219.9 132 78.8
EL10Ac9g21342 Beta vulgaris HOM05D006134 ORTHO05D007671 1.1e-55 219.9 132 78.8
Lj6g0003235 Lotus japonicus HOM05D006134 ORTHO05D007671 1.5e-55 219.5 132 76.5
CANSAT80G1040 Cannabis sativa HOM05D006134 ORTHO05D007671 1.9e-55 219.2 132 78.0
Lsat_1_v5_gn_1_25060 Lactuca sativa HOM05D006134 ORTHO05D007671 4.3e-55 218.0 131 79.4
QL11p052022 Quercus lobata HOM05D006134 ORTHO05D007671 7.4e-55 217.2 131 74.8
QL11p052248 Quercus lobata HOM05D006134 ORTHO05D007671 7.4e-55 217.2 131 74.8
Cpa.g.sc182.12 Carica papaya HOM05D006134 ORTHO05D007671 9.6e-55 216.9 132 76.5
Oeu055649.1 Olea europaea HOM05D006134 ORTHO05D007671 9.6e-55 216.9 132 80.3
Phvul.005G034200 Phaseolus vulgaris HOM05D006134 ORTHO05D007671 9.6e-55 216.9 132 76.5
MELO3C008634.2 Cucumis melo HOM05D006134 ORTHO05D007671 1.6e-54 216.1 132 75.0
Manes.11G097800 Manihot esculenta HOM05D006134 ORTHO05D007671 1.6e-54 216.1 132 75.8
Medtr3g082190 Medicago truncatula HOM05D006134 ORTHO05D007671 1.6e-54 216.1 132 75.8
CsaV3_2G009990 Cucumis sativus L. HOM05D006134 ORTHO05D007671 2.1e-54 215.7 132 75.0
DCAR_025267 Daucus carota HOM05D006444 ORTHO05D007748 2.1e-54 215.7 132 78.8
Ca_17958_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 3.7e-54 214.9 132 75.0
SGA_v2.0_scaffold80G25864 Striga asiatica HOM05D006134 ORTHO05D007671 4.8e-54 214.5 132 78.8
Sed0025018 Sechium edule HOM05D006134 ORTHO05D007671 8.1e-54 213.8 132 74.2
Dinv21074 Davidia involucrata HOM05D006134 ORTHO05D007671 1.1e-53 213.4 132 76.5
Migut.N01297 Erythranthe guttata HOM05D006134 ORTHO05D007671 1.4e-53 213.0 132 78.8
Hund14365 Selenicereus undatus HOM05D006134 ORTHO05D007671 1.8e-53 212.6 132 75.0
AUR62010905 Chenopodium quinoa HOM05D006134 ORTHO05D007671 3.1e-53 211.8 144 73.6
HanXRQChr10g0314981 Helianthus annuus HOM05D006134 ORTHO05D007671 3.1e-53 211.8 132 77.3
GSVIVG01023976001 Vitis vinifera HOM05D006134 ORTHO05D007671 5.3e-53 211.1 132 77.3
ECA247G3382 Erigeron canadensis HOM05D006134 ORTHO05D007671 2.0e-52 209.1 132 76.5
unitig_52.g17376 Utricularia gibba HOM05D006134 ORTHO05D007671 5.8e-52 207.6 132 76.5
PGR042G1126 Punica granatum HOM05D006134 ORTHO05D007671 7.6e-52 207.2 132 75.8
TAR376G1190 Trochodendron aralioides HOM05D006134 ORTHO05D007671 7.6e-52 207.2 132 75.0
MSTRG.5438 Avicennia marina HOM05D006134 ORTHO05D007671 9.9e-52 206.8 132 76.5
RcHm_v2.0_Chr7g0212881 Rosa chinensis HOM05D006134 ORTHO05D007671 1.3e-51 206.5 132 75.8
SalBow3G4511 Salvia bowleyana HOM05D006134 ORTHO05D007671 1.3e-51 206.5 132 75.8
FAN04G0013 Fragaria x ananassa HOM05D006134 ORTHO05D007671 2.2e-51 205.7 132 75.0
FAN08G0898 Fragaria x ananassa HOM05D006134 ORTHO05D007671 2.2e-51 205.7 132 75.0
FvH4_5g23580 Fragaria vesca HOM05D006134 ORTHO05D007671 8.4e-51 203.8 132 74.2
FAN18G0426 Fragaria x ananassa HOM05D006134 ORTHO05D007671 8.4e-51 203.8 132 74.2
FAN18G3769 Fragaria x ananassa HOM05D006134 ORTHO05D007671 8.4e-51 203.8 132 74.2
Oeu002964.1 Olea europaea HOM05D006134 ORTHO05D007671 8.4e-51 203.8 132 75.8
Nn6g31911 Nelumbo nucifera HOM05D006134 ORTHO05D007671 2.4e-50 202.2 132 72.7
Rhsim11G0193500 Rhododendron simsii HOM05D006134 ORTHO05D007671 2.4e-50 202.2 172 61.0
vmacro02291 Vaccinium macrocarpon HOM05D006134 ORTHO05D007671 2.4e-50 202.2 204 52.5
Dinv31631 Davidia involucrata HOM05D006134 ORTHO05D007671 4.2e-50 201.4 132 74.2
COL.COLO4_32379 Corchorus olitorius HOM05D006134 ORTHO05D007671 5.5e-50 201.1 132 72.7
FAN13G0082 Fragaria x ananassa HOM05D006134 ORTHO05D007671 9.3e-50 200.3 132 74.2
Duzib052G0391 Durio zibethinus HOM05D006134 ORTHO05D007671 2.7e-49 198.7 132 72.7
Thecc.02G130200 Theobroma cacao HOM05D006134 ORTHO05D007671 2.7e-49 198.7 132 72.7
Sc08g0002730 Simmondsia chinensis HOM05D006134 ORTHO05D007671 7.9e-49 197.2 132 72.7
Eucgr.F02572 Eucalyptus grandis HOM05D006134 ORTHO05D007671 1.0e-48 196.8 132 71.2
Potri.016G127200 Populus trichocarpa HOM05D006134 ORTHO05D007671 1.0e-48 196.8 132 72.7
THA.LOC104807806 Tarenaya hassleriana HOM05D006134 ORTHO05D007671 1.3e-48 196.4 132 71.2
CDE04G1640 Ceratophyllum demersum HOM05D006134 ORTHO05D007671 1.8e-48 196.1 132 72.0
TWI79G0531 Tripterygium wilfordii HOM05D006134 ORTHO05D007671 2.3e-48 195.7 132 72.0
TAR628G0583 Trochodendron aralioides HOM05D006134 ORTHO05D007671 3.0e-48 195.3 132 72.0
Gohir.D01G010100 Gossypium hirsutum HOM05D006134 ORTHO05D007671 6.7e-48 194.1 132 72.0
Gorai.002G012200 Gossypium raimondii HOM05D006134 ORTHO05D007671 6.7e-48 194.1 132 72.0
Aqoxy5G01105 Aquilegia oxysepala HOM05D006134 ORTHO05D007671 1.5e-47 193.0 132 71.2
Gohir.A01G010500 Gossypium hirsutum HOM05D006134 ORTHO05D007671 7.4e-47 190.7 132 71.2
ClCG11G010360 Citrullus lanatus HOM05D006134 ORTHO05D007671 1.3e-46 189.9 115 74.8
Duzib248G0743 Durio zibethinus HOM05D006134 ORTHO05D007671 4.8e-46 188.0 157 61.8
PSO170G0646 Papaver somniferum HOM05D006134 ORTHO05D007671 6.2e-46 187.6 132 68.2
PSO210G5022 Papaver somniferum HOM05D006134 ORTHO05D007671 8.2e-46 187.2 132 67.4
MD12G1003500 Malus domestica HOM05D006134 ORTHO05D007671 1.1e-45 186.8 110 78.2
CDE02G2427 Ceratophyllum demersum HOM05D006134 ORTHO05D007671 3.1e-45 185.3 132 67.4
Aa31LG6G16690 Aethionema arabicum HOM05D006134 ORTHO05D007671 4.0e-45 184.9 132 66.7
ATR0730G227 Amborella trichopoda HOM05D006134 ORTHO05D007671 4.0e-45 184.9 132 66.7
HanXRQChr07g0198481 Helianthus annuus HOM05D006134 ORTHO05D007671 9.0e-45 183.7 132 68.9
Sp7g37280 Schrenkiella parvula HOM05D006134 ORTHO05D007671 3.4e-44 181.8 132 66.7
AUR62013003 Chenopodium quinoa HOM05D006134 ORTHO05D007671 4.5e-44 181.4 110 75.5
Prupe.7G004000 Prunus persica HOM05D006134 ORTHO05D007671 1.3e-43 179.9 132 65.2
Sed0020335 Sechium edule HOM05D006134 ORTHO05D007671 4.9e-43 177.9 132 63.6
Thhalv10026572m.g Eutrema salsugineum HOM05D006134 ORTHO05D007671 6.5e-43 177.6 132 63.6
AUR62010013 Chenopodium quinoa HOM05D006134 ORTHO05D007671 1.1e-42 176.8 110 73.6
AT4G38495 Arabidopsis thaliana HOM05D006134 ORTHO05D007671 2.5e-42 175.6 132 62.1
Mapoly0028s0104 Marchantia polymorpha HOM05D006134 ORTHO05D007671 2.5e-42 175.6 129 62.0
AUR62015152 Chenopodium quinoa HOM05D006134 ORTHO05D007671 7.1e-42 174.1 110 71.8
Carub.0007s0038 Capsella rubella HOM05D006134 ORTHO05D007671 1.0e-40 170.2 132 63.6
Pp3c14_10610 Physcomitrium patens HOM05D006134 ORTHO05D007671 3.0e-40 168.7 129 62.8
Pp3c14_10611 Physcomitrium patens HOM05D006134 ORTHO05D007671 3.0e-40 168.7 129 62.8
SMO367G0732 Selaginella moellendorffii HOM05D006134 ORTHO05D007671 3.0e-40 168.7 131 63.4
Os04g0274400 Oryza sativa ssp. japonica HOM05D006134 ORTHO05D007671 8.7e-40 167.2 132 60.6
AL7G10360 Arabidopsis lyrata HOM05D006134 ORTHO05D007671 1.1e-39 166.8 127 63.0
A01p00050 Brassica napus HOM05D006134 ORTHO05D007671 1.3e-38 163.3 132 62.1
BcaNung01304 Brassica carinata HOM05D006134 ORTHO05D007671 8.2e-38 160.6 132 59.8
BcaNung04221 Brassica carinata HOM05D006134 ORTHO05D007671 8.2e-38 160.6 132 61.4
C01p00090 Brassica napus HOM05D006134 ORTHO05D007671 8.2e-38 160.6 132 59.8
CBR_g12196 Chara braunii HOM05D006134 ORTHO05D007671 1.9e-34 149.4 126 61.9
Zm00001eb420290 Zea mays HOM05D006134 ORTHO05D007671 3.9e-32 141.7 120 55.0
Sabra16G0121200 Salix brachista HOM05D006134 ORTHO05D007671 1.2e-25 120.2 88 67.0
Sabra16G0122100 Salix brachista HOM05D006134 ORTHO05D007671 1.2e-25 120.2 88 67.0
Prupe.4G038000 Prunus persica HOM05D006134 ORTHO05D007671 1.0e-24 117.1 112 54.5
Nitab4.5_0000165g0190 Nicotiana tabacum HOM05D006134 ORTHO05D007671 3.3e-23 112.1 69 81.2
BraA01t00010Z Brassica rapa HOM05D006134 ORTHO05D007671 6.3e-22 107.8 88 60.2
BolC1t00014H Brassica oleracea HOM05D006134 ORTHO05D007671 4.1e-21 105.1 88 56.8
Ca_02756_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 2.6e-20 102.4 66 68.2
Ca_02758_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 2.6e-20 102.4 66 68.2
SEGI_00696 Sequoiadendron giganteum HOM05D006134 ORTHO05D007671 2.6e-20 102.4 66 71.2
A07p02890 Brassica napus HOM05D006134 ORTHO05D007671 7.7e-20 100.9 85 58.8
BraA07t28089Z Brassica rapa HOM05D006134 ORTHO05D007671 7.7e-20 100.9 85 58.8
Ca_02994_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 6.5e-19 97.8 61 70.5
CARHR294230 Cardamine hirsuta HOM05D006134 ORTHO05D007671 8.8e-16 87.4 60 65.0
SHI24498 Sapria himalayana HOM05D006134 ORTHO05D007671 1.1e-15 87.0 60 65.0
TPR.G34385 Trifolium pratense HOM05D006134 ORTHO05D007671 1.8e-13 79.7 44 84.1
Sabra16G0121700 Salix brachista HOM05D006134 ORTHO05D007671 4.1e-13 78.6 45 77.8
EL10Ac8g18393 Beta vulgaris HOM05D006134 ORTHO05D007671 2.0e-12 76.3 48 77.1
SMO230G0118 Selaginella moellendorffii HOM05D006134 ORTHO05D007671 5.7e-07 58.2 40 67.5


User provided reference genes

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