Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000886g0060 Nicotiana tabacum HOM05D003458 ORTHO05D003854 5.4e-86 320.9 150 100.0
Nitab4.5_0008962g0050 Nicotiana tabacum HOM05D003458 ORTHO05D003854 3.3e-83 311.6 150 97.3
PGSC0003DMG400028488 Solanum tuberosum HOM05D003458 ORTHO05D003854 3.5e-69 265.0 163 79.8
Solyc06g068500.3 Solanum lycopersicum HOM05D003458 ORTHO05D003854 3.0e-68 261.9 163 79.1
Sopen06g025750 Solanum pennellii HOM05D003458 ORTHO05D003854 7.3e-67 257.3 163 77.9
CAN.G1932.6 Capsicum annuum HOM05D003458 ORTHO05D003854 1.2e-64 250.0 161 77.0
CAN.G407.1 Capsicum annuum HOM05D003458 ORTHO05D003854 2.1e-61 239.2 164 72.0
PGSC0003DMG400014210 Solanum tuberosum HOM05D003458 ORTHO05D003854 3.5e-61 238.4 164 70.7
Peaxi162Scf00553g00055 Petunia axillaris HOM05D003458 ORTHO05D003854 3.0e-60 235.3 152 76.3
Peaxi162Scf00207g00438 Petunia axillaris HOM05D003458 ORTHO05D003854 4.3e-59 231.5 163 71.2
Sopen03g036500 Solanum pennellii HOM05D003458 ORTHO05D003854 2.8e-58 228.8 164 69.5
Solyc03g117590.3 Solanum lycopersicum HOM05D003458 ORTHO05D003854 1.5e-56 223.0 164 68.9
CSS0014583 Camellia sinensis var. sinensis HOM05D003458 ORTHO05D003854 1.9e-54 216.1 164 66.5
Hma1.2p1_0329F.1_g127190 Hydrangea macrophylla HOM05D003458 ORTHO05D003854 6.6e-52 207.6 153 68.0
Dinv21418 Davidia involucrata HOM05D003458 ORTHO05D003854 1.9e-51 206.1 164 64.6
MSTRG.9399 Avicennia marina HOM05D003458 ORTHO05D003854 7.3e-51 204.1 151 64.2
Cc04_g05210 Coffea canephora HOM05D003458 ORTHO05D003854 9.6e-51 203.8 151 65.6
Oeu018279.2 Olea europaea HOM05D003458 ORTHO05D003854 1.4e-49 199.9 148 65.5
Atru.chr1.2783 Acer truncatum HOM05D003458 ORTHO05D003854 3.1e-49 198.7 161 64.0
Glyma.07G021800 Glycine max HOM05D003458 ORTHO05D003854 9.0e-49 197.2 161 64.0
Dinv23277 Davidia involucrata HOM05D003458 ORTHO05D003854 1.5e-48 196.4 163 60.7
Hma1.2p1_0109F.1_g052660 Hydrangea macrophylla HOM05D003458 ORTHO05D003854 5.8e-48 194.5 165 63.6
Gohir.D05G119000 Gossypium hirsutum HOM05D003458 ORTHO05D003854 2.9e-47 192.2 161 62.1
Gorai.009G122900 Gossypium raimondii HOM05D003458 ORTHO05D003854 2.9e-47 192.2 161 62.1
Lsat_1_v5_gn_4_86780 Lactuca sativa HOM05D003458 ORTHO05D003854 3.8e-47 191.8 165 61.8
Migut.I00685 Erythranthe guttata HOM05D003458 ORTHO05D003854 4.9e-47 191.4 161 61.5
Lalb_Chr01g0012021 Lupinus albus HOM05D003458 ORTHO05D003854 4.9e-47 191.4 158 61.4
arahy.Tifrunner.gnm1.ann1.52HH2Q Arachis hypogaea HOM05D003458 ORTHO05D003854 6.4e-47 191.0 160 61.2
Lsat_1_v5_gn_4_86800 Lactuca sativa HOM05D003458 ORTHO05D003854 8.4e-47 190.7 152 63.8
Prupe.3G100300 Prunus persica HOM05D003458 ORTHO05D003854 1.1e-46 190.3 155 64.5
Lj3g0007846 Lotus japonicus HOM05D003458 ORTHO05D003854 1.9e-46 189.5 153 62.1
Manes.04G101600 Manihot esculenta HOM05D003458 ORTHO05D003854 1.9e-46 189.5 163 58.3
MD09G1225800 Malus domestica HOM05D003458 ORTHO05D003854 2.4e-46 189.1 156 63.5
HanXRQChr16g0499401 Helianthus annuus HOM05D003458 ORTHO05D003854 3.2e-46 188.7 167 59.9
arahy.Tifrunner.gnm1.ann1.RZ8KW2 Arachis hypogaea HOM05D003458 ORTHO05D003854 4.2e-46 188.3 154 61.0
FvH4_6g28480 Fragaria vesca HOM05D003458 ORTHO05D003854 5.4e-46 188.0 161 63.4
FAN14G3070 Fragaria x ananassa HOM05D003458 ORTHO05D003854 7.1e-46 187.6 156 64.7
RcHm_v2.0_Chr2g0132701 Rosa chinensis HOM05D003458 ORTHO05D003854 7.1e-46 187.6 160 61.2
Thecc.06G043800 Theobroma cacao HOM05D003458 ORTHO05D003854 9.3e-46 187.2 163 60.7
FAN05G3986 Fragaria x ananassa HOM05D003458 ORTHO05D003854 1.2e-45 186.8 160 61.9
Potri.001G043100 Populus trichocarpa HOM05D003458 ORTHO05D003854 1.2e-45 186.8 170 58.8
Glyma.08G220000 Glycine max HOM05D003458 ORTHO05D003854 1.6e-45 186.4 151 63.6
Gohir.A05G118300 Gossypium hirsutum HOM05D003458 ORTHO05D003854 1.6e-45 186.4 161 62.1
Oeu004558.1 Olea europaea HOM05D003458 ORTHO05D003854 1.6e-45 186.4 180 58.3
FAN02G0674 Fragaria x ananassa HOM05D003458 ORTHO05D003854 2.1e-45 186.0 155 63.2
Sabra01G0029600 Salix brachista HOM05D003458 ORTHO05D003854 3.5e-45 185.3 170 58.2
MSTRG.11188 Avicennia marina HOM05D003458 ORTHO05D003854 4.6e-45 184.9 151 60.9
MSTRG.22803 Avicennia marina HOM05D003458 ORTHO05D003854 4.6e-45 184.9 154 61.7
Potri.003G183700 Populus trichocarpa HOM05D003458 ORTHO05D003854 7.8e-45 184.1 173 57.8
SalBow6G5477 Salvia bowleyana HOM05D003458 ORTHO05D003854 7.8e-45 184.1 153 60.1
TWI12G1059 Tripterygium wilfordii HOM05D003458 ORTHO05D003854 7.8e-45 184.1 165 60.0
ECA232G4261 Erigeron canadensis HOM05D003458 ORTHO05D003854 1.3e-44 183.3 166 58.4
MD17G1224600 Malus domestica HOM05D003458 ORTHO05D003854 2.3e-44 182.6 157 61.1
Cpa.g.sc362.2 Carica papaya HOM05D003458 ORTHO05D003854 5.1e-44 181.4 161 58.4
Eucgr.F03977 Eucalyptus grandis HOM05D003458 ORTHO05D003854 5.1e-44 181.4 166 57.8
PGR031G3767 Punica granatum HOM05D003458 ORTHO05D003854 5.1e-44 181.4 172 58.7
PGR037G0008 Punica granatum HOM05D003458 ORTHO05D003854 5.1e-44 181.4 172 58.7
arahy.Tifrunner.gnm1.ann1.BDT6Z1 Arachis hypogaea HOM05D003458 ORTHO05D003854 6.6e-44 181.0 135 65.9
CiPaw.02G162800 Carya illinoinensis HOM05D003458 ORTHO05D003854 1.5e-43 179.9 150 60.7
Eucgr.F03971 Eucalyptus grandis HOM05D003458 ORTHO05D003854 1.5e-43 179.9 164 55.5
Eucgr.J03121 Eucalyptus grandis HOM05D003458 ORTHO05D003854 1.9e-43 179.5 158 58.2
HanXRQChr09g0274111 Helianthus annuus HOM05D003458 ORTHO05D003854 2.5e-43 179.1 149 62.4
QL05p036319 Quercus lobata HOM05D003458 ORTHO05D003854 2.5e-43 179.1 160 56.9
Ciclev10026659m.g Citrus clementina HOM05D003458 ORTHO05D003854 4.3e-43 178.3 166 56.6
Haze_16677 Corylus avellana HOM05D003458 ORTHO05D003854 4.3e-43 178.3 121 70.2
VMungo0331G1722 Vigna mungo HOM05D003458 ORTHO05D003854 4.3e-43 178.3 161 57.8
TWI18G0048 Tripterygium wilfordii HOM05D003458 ORTHO05D003854 5.6e-43 177.9 165 60.6
TAR383G0585 Trochodendron aralioides HOM05D003458 ORTHO05D003854 7.3e-43 177.6 165 58.2
CANSAT56G4248 Cannabis sativa HOM05D003458 ORTHO05D003854 9.6e-43 177.2 145 63.4
Lalb_Chr25g0278771 Lupinus albus HOM05D003458 ORTHO05D003854 9.6e-43 177.2 165 55.2
Lsat_1_v5_gn_1_30900 Lactuca sativa HOM05D003458 ORTHO05D003854 1.3e-42 176.8 167 56.3
MELO3C026732.2 Cucumis melo HOM05D003458 ORTHO05D003854 1.6e-42 176.4 143 62.9
Actinidia18254 Actinidia chinensis HOM05D003458 ORTHO05D003854 4.8e-42 174.9 161 59.0
arahy.Tifrunner.gnm1.ann1.A1Q64B Arachis hypogaea HOM05D003458 ORTHO05D003854 4.8e-42 174.9 165 56.4
arahy.Tifrunner.gnm1.ann1.VHV24A Arachis hypogaea HOM05D003458 ORTHO05D003854 4.8e-42 174.9 165 56.4
CiPaw.01G255600 Carya illinoinensis HOM05D003458 ORTHO05D003854 8.1e-42 174.1 118 71.2
COL.COLO4_26747 Corchorus olitorius HOM05D003458 ORTHO05D003854 8.1e-42 174.1 161 58.4
DCAR_016307 Daucus carota HOM05D003458 ORTHO05D003854 3.1e-41 172.2 164 55.5
DCAR_016308 Daucus carota HOM05D003458 ORTHO05D003854 3.1e-41 172.2 164 55.5
Sed0021285 Sechium edule HOM05D003458 ORTHO05D003854 3.1e-41 172.2 158 58.2
TAR636G1057 Trochodendron aralioides HOM05D003458 ORTHO05D003854 3.1e-41 172.2 152 57.9
Actinidia25473 Actinidia chinensis HOM05D003458 ORTHO05D003854 4.0e-41 171.8 161 57.1
HanXRQChr02g0034051 Helianthus annuus HOM05D003458 ORTHO05D003854 2.0e-40 169.5 165 54.5
Nitab4.5_0009867g0010 Nicotiana tabacum HOM05D003458 ORTHO05D003854 2.0e-40 169.5 163 60.1
TAR625G0694 Trochodendron aralioides HOM05D003458 ORTHO05D003854 2.0e-40 169.5 165 55.2
Nitab4.5_0002700g0120 Nicotiana tabacum HOM05D003458 ORTHO05D003854 3.4e-40 168.7 163 59.5
Sabra03G0134200 Salix brachista HOM05D003458 ORTHO05D003854 3.4e-40 168.7 138 63.0
Duzib160G0069 Durio zibethinus HOM05D003458 ORTHO05D003854 9.9e-40 167.2 161 55.3
Medtr4g007300 Medicago truncatula HOM05D003458 ORTHO05D003854 9.9e-40 167.2 168 53.6
GSVIVG01015991001 Vitis vinifera HOM05D003458 ORTHO05D003854 1.7e-39 166.4 158 56.3
ClCG10G012870 Citrullus lanatus HOM05D003458 ORTHO05D003854 3.8e-39 165.2 130 62.3
Migut.D01129 Erythranthe guttata HOM05D003458 ORTHO05D003854 3.8e-39 165.2 150 56.7
PSO063G6005 Papaver somniferum HOM05D003458 ORTHO05D003854 6.4e-39 164.5 122 63.1
Duzib235G1193 Durio zibethinus HOM05D003458 ORTHO05D003854 8.4e-39 164.1 161 54.0
PSO017G5603 Papaver somniferum HOM05D003458 ORTHO05D003854 1.1e-38 163.7 163 52.8
EL10Ac5g11419 Beta vulgaris HOM05D003458 ORTHO05D003854 4.2e-38 161.8 147 53.1
AUR62025872 Chenopodium quinoa HOM05D003458 ORTHO05D003854 5.4e-38 161.4 152 54.6
DCAR_025553 Daucus carota HOM05D003458 ORTHO05D003854 7.1e-38 161.0 157 54.8
ECA247G3925 Erigeron canadensis HOM05D003458 ORTHO05D003854 7.1e-38 161.0 155 54.8
Sed0018915 Sechium edule HOM05D003458 ORTHO05D003854 1.6e-37 159.8 113 66.4
AUR62029843 Chenopodium quinoa HOM05D003458 ORTHO05D003854 2.7e-37 159.1 151 55.0
PGR102G2985 Punica granatum HOM05D003458 ORTHO05D003854 4.6e-37 158.3 162 50.6
arahy.Tifrunner.gnm1.ann1.HTFE1H Arachis hypogaea HOM05D003458 ORTHO05D003854 7.9e-37 157.5 89 76.4
Ca_06645_v3 Cicer arietinum L. HOM05D003458 ORTHO05D003854 7.9e-37 157.5 154 57.1
Phvul.010G162600 Phaseolus vulgaris HOM05D003458 ORTHO05D003854 7.9e-37 157.5 158 53.8
Sp5g34820 Schrenkiella parvula HOM05D003458 ORTHO05D003854 3.0e-36 155.6 158 53.8
BraA07t31985Z Brassica rapa HOM05D003458 ORTHO05D003854 5.1e-36 154.8 155 52.9
MBI14_g09104_MAGBIO Magnolia biondii HOM05D003458 ORTHO05D003854 5.1e-36 154.8 149 54.4
unitig_61.g26225 Utricularia gibba HOM05D003458 ORTHO05D003854 5.1e-36 154.8 153 52.9
Aqoxy7G03379 Aquilegia oxysepala HOM05D003458 ORTHO05D003854 6.7e-36 154.5 157 58.0
BcaC08g47535 Brassica carinata HOM05D003458 ORTHO05D003854 6.7e-36 154.5 155 52.9
BolC6t40375H Brassica oleracea HOM05D003458 ORTHO05D003854 6.7e-36 154.5 155 52.9
Thhalv10019250m.g Eutrema salsugineum HOM05D003458 ORTHO05D003854 6.7e-36 154.5 158 53.8
A07p44770 Brassica napus HOM05D003458 ORTHO05D003854 1.5e-35 153.3 155 52.3
C06p53590 Brassica napus HOM05D003458 ORTHO05D003854 1.9e-35 152.9 155 52.3
Duzib235G0945 Durio zibethinus HOM05D003458 ORTHO05D003854 1.9e-35 152.9 161 52.8
BcaB02g08712 Brassica carinata HOM05D003458 ORTHO05D003854 5.6e-35 151.4 155 51.6
CARHR073560 Cardamine hirsuta HOM05D003458 ORTHO05D003854 1.6e-34 149.8 158 50.6
Aa31LG4G1230 Aethionema arabicum HOM05D003458 ORTHO05D003854 2.8e-34 149.1 161 50.3
Lj3g0014635 Lotus japonicus HOM05D003458 ORTHO05D003854 2.8e-34 149.1 151 52.3
BcaC08g45347 Brassica carinata HOM05D003458 ORTHO05D003854 6.2e-34 147.9 141 53.9
C06p29610 Brassica napus HOM05D003458 ORTHO05D003854 6.2e-34 147.9 141 53.9
BolC6t38126H Brassica oleracea HOM05D003458 ORTHO05D003854 6.2e-34 147.9 141 53.9
MBI15_g18233_MAGBIO Magnolia biondii HOM05D003458 ORTHO05D003854 8.1e-34 147.5 120 60.0
THA.LOC104812418 Tarenaya hassleriana HOM05D003458 ORTHO05D003854 1.4e-33 146.7 116 59.5
Actinidia08942 Actinidia chinensis HOM05D000470 ORTHO05D003854 2.4e-33 146.0 160 51.2
A07p26930 Brassica napus HOM05D003458 ORTHO05D003854 5.3e-33 144.8 155 49.7
BraA07t30338Z Brassica rapa HOM05D003458 ORTHO05D003854 5.3e-33 144.8 155 49.7
TPR.G3351 Trifolium pratense HOM05D003458 ORTHO05D003854 9.0e-33 144.1 159 51.6
BcaB05g25215 Brassica carinata HOM05D003458 ORTHO05D003854 1.5e-32 143.3 163 50.3
Psat7g263240 Pisum sativum HOM05D003458 ORTHO05D003854 1.5e-32 143.3 157 51.0
ATR0580G394 Amborella trichopoda HOM05D003458 ORTHO05D003854 2.6e-32 142.5 133 53.4
CDE02G3149 Ceratophyllum demersum HOM05D003458 ORTHO05D003854 4.5e-32 141.7 148 55.4
unitig_0.g1100 Utricularia gibba HOM05D003458 ORTHO05D003854 7.6e-32 141.0 149 50.3
A02p23060 Brassica napus HOM05D003458 ORTHO05D003854 1.1e-30 137.1 160 48.8
BraA02t07304Z Brassica rapa HOM05D003458 ORTHO05D003854 1.1e-30 137.1 160 48.8
Ah.01g016990 Amaranthus hybridus HOM05D003458 ORTHO05D003854 1.4e-30 136.7 162 50.0
Manes.11G068500 Manihot esculenta HOM05D003458 ORTHO05D003854 1.9e-30 136.3 155 51.0
BolC2t09685H Brassica oleracea HOM05D003458 ORTHO05D003854 2.4e-30 136.0 160 47.5
C02p36810 Brassica napus HOM05D003458 ORTHO05D003854 3.2e-30 135.6 160 47.5
CDE04G0124 Ceratophyllum demersum HOM05D003458 ORTHO05D003854 3.2e-30 135.6 148 53.4
ECA246G2335 Erigeron canadensis HOM05D003458 ORTHO05D003854 7.1e-30 134.4 130 53.1
CsaV3_3G032730 Cucumis sativus L. HOM05D003458 ORTHO05D003854 1.9e-27 126.3 143 51.7
arahy.Tifrunner.gnm1.ann1.G8IK15 Arachis hypogaea HOM05D003458 ORTHO05D003854 4.3e-27 125.2 88 65.9
BcaC03g15919 Brassica carinata HOM05D003458 ORTHO05D003854 7.4e-27 124.4 158 45.6
Cfa001871 Carpinus fangiana HOM05D003458 ORTHO05D003854 1.3e-26 123.6 110 59.1
CsaV3_3G032720 Cucumis sativus L. HOM05D003458 ORTHO05D003854 2.1e-26 122.9 154 44.8
BcaB02g07239 Brassica carinata HOM05D003458 ORTHO05D003854 6.2e-26 121.3 158 46.8
vmacro16847 Vaccinium macrocarpon HOM05D003458 ORTHO05D003854 2.0e-24 116.3 166 44.6
vmacro16846 Vaccinium macrocarpon HOM05D003458 ORTHO05D003854 5.8e-24 114.8 166 44.6
arahy.Tifrunner.gnm1.ann1.NIPD93 Arachis hypogaea HOM05D003458 ORTHO05D003854 6.5e-23 111.3 114 53.5
AL2G40460 Arabidopsis lyrata HOM05D003458 ORTHO05D003854 3.2e-22 109.0 158 43.7
AT1G80920 Arabidopsis thaliana HOM05D003458 ORTHO05D003854 3.2e-22 109.0 158 43.7
CSS0041792 Camellia sinensis var. sinensis HOM05D003458 ORTHO05D003854 5.5e-22 108.2 104 58.7
CSS0012292 Camellia sinensis var. sinensis HOM05D003458 ORTHO05D003854 9.3e-22 107.5 106 56.6
CSS0042256 Camellia sinensis var. sinensis HOM05D003458 ORTHO05D003854 9.3e-22 107.5 106 56.6
Carub.0002s2662 Capsella rubella HOM05D003458 ORTHO05D003854 4.6e-21 105.1 158 43.7
arahy.Tifrunner.gnm1.ann1.9XRG1B Arachis hypogaea HOM05D003458 ORTHO05D003854 6.0e-21 104.8 63 73.0
Rhsim12G0184600 Rhododendron simsii HOM05D003458 ORTHO05D003854 7.9e-21 104.4 153 43.1
Rhsim12G0186500 Rhododendron simsii HOM05D003458 ORTHO05D003854 7.9e-21 104.4 153 43.1
SalBow7G4540 Salvia bowleyana HOM05D003458 ORTHO05D003854 1.5e-19 100.1 85 58.8
SGA_v2.0_scaffold5G02794 Striga asiatica HOM05D000537 ORTHO05D000415 1.5e-19 100.1 138 46.4
SEGI_25751 Sequoiadendron giganteum HOM05D003458 ORTHO05D003854 7.4e-19 97.8 155 40.6
Migut.G01167 Erythranthe guttata HOM05D003458 ORTHO05D003854 2.4e-17 92.8 80 52.5
Migut.K00581 Erythranthe guttata HOM05D003458 ORTHO05D003854 2.4e-17 92.8 80 52.5
Pp3c4_26000 Physcomitrium patens HOM05D003458 ORTHO05D003854 7.6e-16 87.8 125 36.8
Mapoly0004s0037 Marchantia polymorpha HOM05D003458 ORTHO05D003854 7.2e-14 81.3 112 39.3
Hund02413 Selenicereus undatus HOM05D003458 ORTHO05D003854 3.6e-13 79.0 149 39.6
unitig_52.g17479 Utricularia gibba HOM05D002088 ORTHO05D002204 1.0e-12 77.4 114 42.1
Pp3c26_5100 Physcomitrium patens HOM05D003458 ORTHO05D003854 8.8e-12 74.3 142 31.7
Sc13g0009300 Simmondsia chinensis HOM05D003458 ORTHO05D003854 2.5e-11 72.8 103 42.7
CDE04G1020 Ceratophyllum demersum HOM05D003458 ORTHO05D003854 5.7e-11 71.6 67 53.7
Pp3c4_11750 Physcomitrium patens HOM05D003458 ORTHO05D003854 9.7e-11 70.9 123 39.0
Pp3c8_2480 Physcomitrium patens HOM05D003458 ORTHO05D003854 1.3e-10 70.5 154 34.4
Mapoly0124s0043 Marchantia polymorpha HOM05D003458 ORTHO05D003854 1.4e-09 67.0 108 36.1
Pp3c22_22070 Physcomitrium patens HOM05D003458 ORTHO05D003854 1.4e-09 67.0 114 34.2
AagrBONN_evm.TU.Sc2ySwM_228.3720 Anthoceros agrestis HOM05D003458 ORTHO05D003854 5.3e-09 65.1 144 34.0
Hund02414 Selenicereus undatus HOM05D003458 ORTHO05D003854 9.1e-09 64.3 172 31.4
Pp3c18_3780 Physcomitrium patens HOM05D003458 ORTHO05D003854 1.5e-08 63.5 82 35.4
AagrBONN_evm.TU.Sc2ySwM_228.3743 Anthoceros agrestis HOM05D003458 ORTHO05D003854 3.4e-08 62.4 143 29.4
Pp3c22_22180 Physcomitrium patens HOM05D003458 ORTHO05D003854 3.4e-08 62.4 85 35.3
Pp3c12_16420 Physcomitrium patens HOM05D003458 ORTHO05D003854 7.7e-08 61.2 140 32.1
Pp3c18_3800 Physcomitrium patens HOM05D003458 ORTHO05D003854 3.8e-07 58.9 110 33.6
Pp3c3_35390 Physcomitrium patens HOM05D003458 ORTHO05D003854 2.5e-06 56.2 115 33.0


User provided reference genes

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