Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000885g0010 Nicotiana tabacum HOM05D011433 ORTHO05D010333 2.5e-30 134.8 69 100.0
CAN.G78.78 Capsicum annuum HOM05D011433 ORTHO05D013366 7.6e-19 96.7 69 71.0
DCAR_008607 Daucus carota HOM05D011433 ORTHO05D013366 1.4e-09 65.9 69 47.8
Potri.002G159800 Populus trichocarpa HOM05D011433 ORTHO05D013366 1.4e-09 65.9 76 52.6
Dinv43814 Davidia involucrata HOM05D003460 ORTHO05D013366 7.1e-09 63.5 75 53.3
Gorai.001G169500 Gossypium raimondii HOM05D011433 ORTHO05D013366 9.3e-09 63.2 63 57.1
Actinidia34129 Actinidia chinensis HOM05D000206 ORTHO05D002863 3.5e-08 61.2 61 52.5
Thecc.01G359100 Theobroma cacao HOM05D011433 ORTHO05D013366 3.5e-08 61.2 75 52.0
Gohir.A07G142400 Gossypium hirsutum HOM05D011433 ORTHO05D013366 4.6e-08 60.8 77 46.8
Gohir.D07G148300 Gossypium hirsutum HOM05D011433 ORTHO05D013366 4.6e-08 60.8 77 46.8
CSS0023725 Camellia sinensis var. sinensis HOM05D008240 ORTHO05D010333 7.9e-08 60.1 71 45.1
A06p18700 Brassica napus HOM05D002671 ORTHO05D010333 1.0e-07 59.7 47 66.0
Haze_00010 Corylus avellana HOM05D008240 ORTHO05D010333 1.3e-07 59.3 53 54.7
Manes.14G024900 Manihot esculenta HOM05D008240 ORTHO05D010333 1.3e-07 59.3 49 59.2
TWI59G1460 Tripterygium wilfordii HOM05D011433 ORTHO05D013366 1.3e-07 59.3 63 55.6
Lsat_1_v5_gn_9_55121 Lactuca sativa HOM05D008240 ORTHO05D010333 2.3e-07 58.5 49 59.2
Manes.06G149600 Manihot esculenta HOM05D008240 ORTHO05D010333 2.3e-07 58.5 48 60.4
Sabra02G0126800 Salix brachista HOM05D011433 ORTHO05D013366 2.3e-07 58.5 72 50.0
Dinv28418 Davidia involucrata HOM05D008240 ORTHO05D002863 8.7e-07 56.6 49 55.1
Potri.014G084350 Populus trichocarpa HOM05D011433 ORTHO05D013366 8.7e-07 56.6 76 46.1
Atru.chr5.494 Acer truncatum HOM05D011433 ORTHO05D013366 1.1e-06 56.2 77 49.4
Ciclev10006392m.g Citrus clementina HOM05D008240 ORTHO05D010333 1.1e-06 56.2 49 57.1
FvH4_7g29780 Fragaria vesca HOM05D008240 ORTHO05D010333 1.1e-06 56.2 60 45.0
Lalb_Chr21g0305111 Lupinus albus HOM05D008240 ORTHO05D010333 1.1e-06 56.2 57 45.6
RcHm_v2.0_Chr1g0377781 Rosa chinensis HOM05D008240 ORTHO05D010333 1.1e-06 56.2 56 51.8
arahy.Tifrunner.gnm1.ann1.MUHC0Z Arachis hypogaea HOM05D002671 ORTHO05D010333 1.5e-06 55.8 56 53.6
Glyma.12G005800 Glycine max HOM05D008240 ORTHO05D010333 1.5e-06 55.8 49 53.1
BraA06t24953Z Brassica rapa HOM05D008240 ORTHO05D010333 1.9e-06 55.5 47 59.6
Glyma.09G230900 Glycine max HOM05D008240 ORTHO05D010333 1.9e-06 55.5 45 55.6
Potri.001G178400 Populus trichocarpa HOM05D008240 ORTHO05D010333 1.9e-06 55.5 59 49.2
Sc13g0008860 Simmondsia chinensis HOM05D008240 ORTHO05D010333 1.9e-06 55.5 49 53.1
vmacro06659 Vaccinium macrocarpon HOM05D000206 ORTHO05D002863 1.9e-06 55.5 49 55.1
arahy.Tifrunner.gnm1.ann1.ES0TVM Arachis hypogaea HOM05D008240 ORTHO05D010333 2.5e-06 55.1 50 56.0
EL10Ac1g00417 Beta vulgaris HOM05D011433 ORTHO05D013366 2.5e-06 55.1 69 46.4
Thecc.03G179600 Theobroma cacao HOM05D008240 ORTHO05D010333 2.5e-06 55.1 53 52.8
Atru.chr1.425 Acer truncatum HOM05D008240 ORTHO05D010333 3.3e-06 54.7 50 52.0
BolC8t50025H Brassica oleracea HOM05D008240 ORTHO05D010333 3.3e-06 54.7 47 61.7
CAN.G1175.10 Capsicum annuum HOM05D008240 ORTHO05D010333 3.3e-06 54.7 44 59.1
AUR62021162 Chenopodium quinoa HOM05D008240 ORTHO05D010333 3.3e-06 54.7 60 46.7
Gorai.008G276000 Gossypium raimondii HOM05D008240 ORTHO05D010333 3.3e-06 54.7 59 47.5
Phvul.011G006600 Phaseolus vulgaris HOM05D008240 ORTHO05D010333 3.3e-06 54.7 54 50.0
Psat6g197280 Pisum sativum HOM05D008240 ORTHO05D010333 3.3e-06 54.7 52 53.8
Sabra01G0148200 Salix brachista HOM05D008240 ORTHO05D010333 3.3e-06 54.7 45 60.0
Solyc03g025480.4 Solanum lycopersicum HOM05D008240 ORTHO05D010333 3.3e-06 54.7 66 51.5
Sopen03g004320 Solanum pennellii HOM05D008240 ORTHO05D010333 3.3e-06 54.7 66 51.5
Carub.0005s1524 Capsella rubella HOM05D008240 ORTHO05D010333 4.3e-06 54.3 51 58.8
Gohir.D12G257700 Gossypium hirsutum HOM05D008240 ORTHO05D010333 4.3e-06 54.3 52 51.9
Hma1.2p1_0227F.1_g095850 Hydrangea macrophylla HOM05D008240 ORTHO05D010333 4.3e-06 54.3 46 54.3
VMungo1127G0785 Vigna mungo HOM05D008240 ORTHO05D010333 5.6e-06 53.9 54 48.1
ClCG10G005770 Citrullus lanatus HOM05D008240 ORTHO05D010333 7.4e-06 53.5 63 47.6
Gohir.A12G256400 Gossypium hirsutum HOM05D008240 ORTHO05D010333 7.4e-06 53.5 59 47.5
Prupe.2G297100 Prunus persica HOM05D008240 ORTHO05D010333 7.4e-06 53.5 56 50.0
TPR.G27012 Trifolium pratense HOM05D008240 ORTHO05D010333 7.4e-06 53.5 47 55.3
Aqoxy7G00310 Aquilegia oxysepala HOM05D008240 ORTHO05D010333 9.6e-06 53.1 56 48.2
COL.COLO4_03572 Corchorus olitorius HOM05D008240 ORTHO05D010333 9.6e-06 53.1 52 51.9
COL.COLO4_28004 Corchorus olitorius HOM05D008240 ORTHO05D010333 9.6e-06 53.1 52 51.9
Nn6g33426 Nelumbo nucifera HOM05D008240 ORTHO05D010333 9.6e-06 53.1 49 51.0


User provided reference genes

Program Settings