Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000883g0040 Nicotiana tabacum HOM05D003167 ORTHO05D003929 1.5e-61 239.2 113 100.0
Solyc10g085410.3 Solanum lycopersicum HOM05D003167 ORTHO05D003929 1.8e-46 189.1 112 76.8
Sopen10g034860 Solanum pennellii HOM05D003167 ORTHO05D003929 1.8e-46 189.1 112 76.8
CAN.G738.3 Capsicum annuum HOM05D003167 ORTHO05D003929 3.1e-46 188.3 112 76.8
PGSC0003DMG400040194 Solanum tuberosum HOM05D003167 ORTHO05D003929 9.1e-46 186.8 112 75.9
Nitab4.5_0002027g0020 Nicotiana tabacum HOM05D003167 ORTHO05D003929 3.5e-45 184.9 113 75.2
Peaxi162Scf01089g10011 Petunia axillaris HOM05D003167 ORTHO05D003929 6.5e-44 180.6 113 73.5
CAN.G1459.3 Capsicum annuum HOM05D003167 ORTHO05D003929 1.1e-43 179.9 112 73.2
Oeu027192.1 Olea europaea HOM05D003167 ORTHO05D003929 4.2e-43 177.9 112 75.9
Cc10_g12700 Coffea canephora HOM05D003167 ORTHO05D003929 2.7e-42 175.3 119 69.7
Peaxi162Scf00732g00028 Petunia axillaris HOM05D003167 ORTHO05D003929 4.7e-42 174.5 109 72.5
unitig_578.g16659 Utricularia gibba HOM05D003167 ORTHO05D003929 8.0e-42 173.7 111 72.1
SalBow8G1467 Salvia bowleyana HOM05D003167 ORTHO05D003929 6.8e-41 170.6 111 69.4
SalBow8G3947 Salvia bowleyana HOM05D003167 ORTHO05D003929 6.8e-41 170.6 111 69.4
Cpa.g.sc5.120 Carica papaya HOM05D003167 ORTHO05D003929 8.8e-41 170.2 113 69.0
Lalb_Chr21g0315291 Lupinus albus HOM05D003167 ORTHO05D003929 8.8e-41 170.2 115 71.3
COL.COLO4_22264 Corchorus olitorius HOM05D003167 ORTHO05D003929 1.2e-40 169.9 114 70.2
Thecc.05G076300 Theobroma cacao HOM05D003167 ORTHO05D003929 1.2e-40 169.9 115 71.3
Ciclev10011207m.g Citrus clementina HOM05D003167 ORTHO05D003929 2.0e-40 169.1 115 70.4
MELO3C009413.2 Cucumis melo HOM05D003167 ORTHO05D003929 2.0e-40 169.1 115 70.4
CsaV3_3G036590 Cucumis sativus L. HOM05D003167 ORTHO05D003929 2.0e-40 169.1 115 70.4
Gohir.A04G067800 Gossypium hirsutum HOM05D003167 ORTHO05D003929 2.0e-40 169.1 115 71.3
Gohir.D04G106400 Gossypium hirsutum HOM05D003167 ORTHO05D003929 2.0e-40 169.1 115 71.3
Gorai.009G410400 Gossypium raimondii HOM05D003167 ORTHO05D003929 2.0e-40 169.1 115 71.3
arahy.Tifrunner.gnm1.ann1.P92TZX Arachis hypogaea HOM05D003167 ORTHO05D003929 2.6e-40 168.7 115 70.4
arahy.Tifrunner.gnm1.ann1.WY8M22 Arachis hypogaea HOM05D003167 ORTHO05D003929 2.6e-40 168.7 115 70.4
ClCG10G019590 Citrullus lanatus HOM05D003167 ORTHO05D003929 2.6e-40 168.7 115 69.6
THA.LOC104816364 Tarenaya hassleriana HOM05D003167 ORTHO05D003929 3.4e-40 168.3 115 71.3
vmacro07353 Vaccinium macrocarpon HOM05D003167 ORTHO05D003929 3.4e-40 168.3 105 72.4
VMungo0720G2588 Vigna mungo HOM05D003167 ORTHO05D003929 3.4e-40 168.3 115 70.4
Actinidia26630 Actinidia chinensis HOM05D003167 ORTHO05D003929 5.7e-40 167.5 105 72.4
Aa31LG1G9100 Aethionema arabicum HOM05D003167 ORTHO05D003929 5.7e-40 167.5 114 70.2
BcaC07g42222 Brassica carinata HOM05D003167 ORTHO05D003929 5.7e-40 167.5 114 69.3
A09p68130 Brassica napus HOM05D003167 ORTHO05D003929 5.7e-40 167.5 114 69.3
BolC8t52784H Brassica oleracea HOM05D003167 ORTHO05D003929 5.7e-40 167.5 114 69.3
BraA09t42148Z Brassica rapa HOM05D003167 ORTHO05D003929 5.7e-40 167.5 114 69.3
CANSAT80G1311 Cannabis sativa HOM05D003167 ORTHO05D003929 5.7e-40 167.5 107 72.9
DCAR_020795 Daucus carota HOM05D003167 ORTHO05D003929 5.7e-40 167.5 116 70.7
Manes.08G017200 Manihot esculenta HOM05D003167 ORTHO05D003929 5.7e-40 167.5 115 70.4
C08p52570 Brassica napus HOM05D003167 ORTHO05D003929 7.5e-40 167.2 114 69.3
Thhalv10006994m.g Eutrema salsugineum HOM05D003167 ORTHO05D003929 7.5e-40 167.2 99 75.8
Lj3C1008T14 Lonicera japonica HOM05D003167 ORTHO05D003929 7.5e-40 167.2 99 76.8
CARHR003250 Cardamine hirsuta HOM05D003167 ORTHO05D003929 9.8e-40 166.8 99 75.8
Duzib093G1992 Durio zibethinus HOM05D003167 ORTHO05D003929 9.8e-40 166.8 115 70.4
Sp1g02770 Schrenkiella parvula HOM05D003167 ORTHO05D003929 9.8e-40 166.8 99 75.8
Psat6g078080 Pisum sativum HOM05D003167 ORTHO05D003929 1.3e-39 166.4 114 71.1
Prupe.7G122300 Prunus persica HOM05D003167 ORTHO05D003929 1.3e-39 166.4 116 69.0
Rhsim03G0085500 Rhododendron simsii HOM05D003167 ORTHO05D003929 1.3e-39 166.4 105 71.4
Dinv35839 Davidia involucrata HOM05D003167 ORTHO05D003929 1.7e-39 166.0 114 70.2
Potri.006G118700 Populus trichocarpa HOM05D003167 ORTHO05D003929 1.7e-39 166.0 114 71.1
QL07p041296 Quercus lobata HOM05D003167 ORTHO05D003929 1.7e-39 166.0 107 72.0
Aqoxy1G01021 Aquilegia oxysepala HOM05D003167 ORTHO05D003929 2.2e-39 165.6 115 70.4
AL1G13510 Arabidopsis lyrata HOM05D003167 ORTHO05D003929 2.2e-39 165.6 98 76.5
AT1G03910 Arabidopsis thaliana HOM05D003167 ORTHO05D003929 2.2e-39 165.6 98 76.5
CSS0014862 Camellia sinensis var. sinensis HOM05D003167 ORTHO05D003929 2.2e-39 165.6 106 71.7
CSS0043785 Camellia sinensis var. sinensis HOM05D003167 ORTHO05D003929 2.2e-39 165.6 106 71.7
CiPaw.10G002600 Carya illinoinensis HOM05D003167 ORTHO05D003929 2.2e-39 165.6 115 69.6
Ca_08942_v3 Cicer arietinum L. HOM05D003167 ORTHO05D003929 2.8e-39 165.2 114 70.2
Hma1.2p1_0564F.1_g179130 Hydrangea macrophylla HOM05D003167 ORTHO05D003929 2.8e-39 165.2 106 71.7
Sabra06G0093300 Salix brachista HOM05D003167 ORTHO05D003929 2.8e-39 165.2 114 71.1
TPR.G27088 Trifolium pratense HOM05D003167 ORTHO05D003929 2.8e-39 165.2 114 70.2
Aqoxy1G01022 Aquilegia oxysepala HOM05D003167 ORTHO05D003929 3.7e-39 164.9 107 72.9
Migut.G00710 Erythranthe guttata HOM05D003167 ORTHO05D003929 3.7e-39 164.9 113 68.1
FAN05G3981 Fragaria x ananassa HOM05D003167 ORTHO05D003929 3.7e-39 164.9 115 70.4
FAN05G5009 Fragaria x ananassa HOM05D003167 ORTHO05D003929 3.7e-39 164.9 115 70.4
TPR.G31678 Trifolium pratense HOM05D003167 ORTHO05D003929 3.7e-39 164.9 114 71.1
GSVIVG01033725001 Vitis vinifera HOM05D003167 ORTHO05D003929 3.7e-39 164.9 115 68.7
Eucgr.K02416 Eucalyptus grandis HOM05D003167 ORTHO05D003929 4.8e-39 164.5 98 76.5
Glyma.03G188600 Glycine max HOM05D003167 ORTHO05D003929 4.8e-39 164.5 107 72.0
Lalb_Chr25g0288761 Lupinus albus HOM05D003167 ORTHO05D003929 4.8e-39 164.5 98 76.5
Medtr7g102700 Medicago truncatula HOM05D003167 ORTHO05D003929 4.8e-39 164.5 114 70.2
Phvul.001G184000 Phaseolus vulgaris HOM05D003167 ORTHO05D003929 4.8e-39 164.5 107 72.0
PGR142G4079 Punica granatum HOM05D003167 ORTHO05D003929 4.8e-39 164.5 99 75.8
HPP92_017793 Vanilla planifolia HOM05D003167 ORTHO05D003929 4.8e-39 164.5 106 69.8
MSTRG.21603 Avicennia marina HOM05D003167 ORTHO05D003929 6.3e-39 164.1 104 75.0
Carub.0001s0306 Capsella rubella HOM05D003167 ORTHO05D003929 6.3e-39 164.1 98 75.5
Lj1g0005916 Lotus japonicus HOM05D003167 ORTHO05D003929 6.3e-39 164.1 98 76.5
Sed0027110 Sechium edule HOM05D003167 ORTHO05D003929 8.3e-39 163.7 115 68.7
VMungo1383G0302 Vigna mungo HOM05D003167 ORTHO05D003929 8.3e-39 163.7 107 72.0
A10p02430 Brassica napus HOM05D003167 ORTHO05D003929 1.1e-38 163.3 114 68.4
Cfa016494 Carpinus fangiana HOM05D003167 ORTHO05D003929 1.1e-38 163.3 114 68.4
FAN05G3544 Fragaria x ananassa HOM05D003167 ORTHO05D003929 1.1e-38 163.3 115 69.6
Glyma.19G188800 Glycine max HOM05D003167 ORTHO05D003929 1.1e-38 163.3 107 71.0
Psat3g037760 Pisum sativum HOM05D003167 ORTHO05D003929 1.1e-38 163.3 114 69.3
Haze_19497 Corylus avellana HOM05D003167 ORTHO05D003929 1.4e-38 162.9 114 68.4
Glyma.13G148300 Glycine max HOM05D003167 ORTHO05D003929 1.4e-38 162.9 115 68.7
RcHm_v2.0_Chr3g0471451 Rosa chinensis HOM05D003167 ORTHO05D003929 1.4e-38 162.9 116 69.8
FvH4_6g17312 Fragaria vesca HOM05D003167 ORTHO05D003929 1.8e-38 162.5 115 70.4
FAN14G2907 Fragaria x ananassa HOM05D003167 ORTHO05D003929 1.8e-38 162.5 115 70.4
Medtr1g061860 Medicago truncatula HOM05D003167 ORTHO05D003929 1.8e-38 162.5 107 70.1
Zm00001eb061170 Zea mays HOM05D003167 ORTHO05D003929 1.8e-38 162.5 106 69.8
FAN02G2003 Fragaria x ananassa HOM05D003167 ORTHO05D003929 3.1e-38 161.8 115 70.4
TAR623G0013 Trochodendron aralioides HOM05D003167 ORTHO05D003929 3.1e-38 161.8 114 69.3
C05p02250 Brassica napus HOM05D003167 ORTHO05D003929 4.1e-38 161.4 114 67.5
BolC5t29003H Brassica oleracea HOM05D003167 ORTHO05D003929 4.1e-38 161.4 114 67.5
SHI27742 Sapria himalayana HOM05D003167 ORTHO05D003929 4.1e-38 161.4 97 71.1
Hund04098 Selenicereus undatus HOM05D003167 ORTHO05D003929 7.0e-38 160.6 99 73.7
TAR636G1269 Trochodendron aralioides HOM05D003167 ORTHO05D003929 9.1e-38 160.2 115 67.8
HanXRQChr11g0325191 Helianthus annuus HOM05D003167 ORTHO05D003929 1.2e-37 159.8 106 67.0
PSO339G0841 Papaver somniferum HOM05D003167 ORTHO05D003929 2.0e-37 159.1 107 68.2
MD14G1096200 Malus domestica HOM05D003167 ORTHO05D003929 3.5e-37 158.3 115 66.1
EL10Ac7g16722 Beta vulgaris HOM05D003167 ORTHO05D003929 7.7e-37 157.1 116 63.8
Ah.15g091340 Amaranthus hybridus HOM05D003167 ORTHO05D003929 1.0e-36 156.8 90 76.7
ECA238G2918 Erigeron canadensis HOM05D003167 ORTHO05D003929 1.0e-36 156.8 98 70.4
PSO210G0575 Papaver somniferum HOM05D003167 ORTHO05D003929 1.3e-36 156.4 106 66.0
CDE04G1328 Ceratophyllum demersum HOM05D003167 ORTHO05D003929 1.7e-36 156.0 93 75.3
ECA232G4074 Erigeron canadensis HOM05D003167 ORTHO05D003929 2.9e-36 155.2 98 69.4
AUR62040188 Chenopodium quinoa HOM05D003167 ORTHO05D003929 3.8e-36 154.8 114 64.0
AUR62042696 Chenopodium quinoa HOM05D003167 ORTHO05D003929 3.8e-36 154.8 114 64.0
Thecc.06G013600 Theobroma cacao HOM05D003167 ORTHO05D003929 1.1e-35 153.3 93 75.3
Lsat_1_v5_gn_2_23140 Lactuca sativa HOM05D003167 ORTHO05D003929 2.5e-35 152.1 92 71.7
AagrBONN_evm.TU.Sc2ySwM_344.2239 Anthoceros agrestis HOM05D003167 ORTHO05D003929 3.2e-35 151.8 112 62.5
Atru.chr8.1695 Acer truncatum HOM05D003167 ORTHO05D003929 4.2e-35 151.4 118 62.7
SEGI_27063 Sequoiadendron giganteum HOM05D003167 ORTHO05D003929 4.2e-35 151.4 86 77.9
SEGI_34935 Sequoiadendron giganteum HOM05D003167 ORTHO05D003929 4.2e-35 151.4 86 77.9
SMO169G0108 Selaginella moellendorffii HOM05D003167 ORTHO05D003929 1.6e-34 149.4 96 72.9
Carub.0004s1866 Capsella rubella HOM05D003167 ORTHO05D003929 8.0e-34 147.1 94 71.3
Mapoly0001s0156 Marchantia polymorpha HOM05D003167 ORTHO05D003929 1.8e-33 146.0 84 76.2
Pp3c27_420 Physcomitrium patens HOM05D003167 ORTHO05D003929 4.0e-33 144.8 113 59.3
MD12G1102100 Malus domestica HOM05D003167 ORTHO05D003929 5.2e-33 144.4 88 71.6
CBR_g4119 Chara braunii HOM05D003167 ORTHO05D003929 1.5e-32 142.9 111 61.3
SGA_v2.0_scaffold312G48279 Striga asiatica HOM05D003167 ORTHO05D003929 2.0e-32 142.5 105 63.8
Cc04_g07780 Coffea canephora HOM05D003167 ORTHO05D003929 4.4e-32 141.4 105 63.8
ATR0724G050 Amborella trichopoda HOM05D003167 ORTHO05D003929 4.1e-30 134.8 96 64.6
AL4G33010 Arabidopsis lyrata HOM05D003167 ORTHO05D003929 4.1e-30 134.8 91 69.2
BcaNung06144 Brassica carinata HOM05D003167 ORTHO05D003929 3.5e-29 131.7 78 74.4
Hma1.2p1_0033F.1_g020920 Hydrangea macrophylla HOM05D003167 ORTHO05D003929 1.0e-28 130.2 87 66.7
Potri.001G242900 Populus trichocarpa HOM05D003167 ORTHO05D003929 1.3e-28 129.8 97 60.8
Hma1.2p1_2996F.1_g331470 Hydrangea macrophylla HOM05D003167 ORTHO05D003929 1.7e-28 129.4 87 66.7
Cre09.g398650 Chlamydomonas reinhardtii HOM05D003167 ORTHO05D003929 2.3e-28 129.0 90 66.7
Lj8P306T56 Lonicera japonica HOM05D003167 ORTHO05D003929 3.8e-28 128.3 113 57.5
SMO364G0524 Selaginella moellendorffii HOM05D003167 ORTHO05D003929 5.0e-28 127.9 84 65.5
Atru.chr10.2404 Acer truncatum HOM05D003167 ORTHO05D003929 1.1e-27 126.7 67 82.1
FvH4_1g06450 Fragaria vesca HOM05D003167 ORTHO05D003929 1.6e-26 122.9 116 50.9
FAN19G3088 Fragaria x ananassa HOM05D003167 ORTHO05D003929 1.6e-26 122.9 116 50.9
RcHm_v2.0_Chr2g0092191 Rosa chinensis HOM05D003167 ORTHO05D003929 2.1e-26 122.5 120 50.8
AUR62007183 Chenopodium quinoa HOM05D003167 ORTHO05D003929 4.7e-26 121.3 94 61.7
AUR62018820 Chenopodium quinoa HOM05D003167 ORTHO05D003929 4.7e-26 121.3 94 61.7
FAN23G0551 Fragaria x ananassa HOM05D003167 ORTHO05D003929 6.1e-26 120.9 116 50.9
EL10Ac3g06890 Beta vulgaris HOM05D003167 ORTHO05D003929 8.0e-26 120.6 87 63.2
AUR62007182 Chenopodium quinoa HOM05D003167 ORTHO05D003929 8.0e-26 120.6 94 61.7
FAN26G0867 Fragaria x ananassa HOM05D003167 ORTHO05D003929 3.0e-25 118.6 116 49.1
FAN26G2184 Fragaria x ananassa HOM05D003167 ORTHO05D003929 3.0e-25 118.6 116 49.1
Thecc.08G192100 Theobroma cacao HOM05D003167 ORTHO05D003929 6.8e-25 117.5 116 53.4
Cfa022090 Carpinus fangiana HOM05D003167 ORTHO05D003929 9.8e-24 113.6 90 55.6
Aqoxy3G01485 Aquilegia oxysepala HOM05D003167 ORTHO05D003929 1.7e-23 112.8 79 65.8
Aqoxy3G01613 Aquilegia oxysepala HOM05D003167 ORTHO05D000007 1.8e-22 109.4 76 68.4
BcaC05g24486 Brassica carinata HOM05D003167 ORTHO05D003929 5.4e-22 107.8 83 65.1
PRCOL_00002534 Prasinoderma coloniale HOM05D003167 ORTHO05D003929 5.4e-22 107.8 111 46.8
FAN28G1035 Fragaria x ananassa HOM05D003167 ORTHO05D003929 7.0e-22 107.5 114 45.6
COL.COLO4_36480 Corchorus olitorius HOM05D003167 ORTHO05D003929 7.8e-21 104.0 92 59.8
Lj1P1240T21 Lonicera japonica HOM05D003167 ORTHO05D003929 5.0e-20 101.3 68 63.2
QL10p005646 Quercus lobata HOM05D003167 ORTHO05D003929 1.5e-19 99.8 67 65.7
CARHR131270 Cardamine hirsuta HOM05D003167 ORTHO05D003929 1.6e-18 96.3 111 47.7
Cc07_g17880 Coffea canephora HOM05D003167 ORTHO05D003929 1.1e-17 93.6 53 71.7
Nitab4.5_0007768g0040 Nicotiana tabacum HOM05D003167 ORTHO05D003929 2.6e-16 89.0 61 68.9
AUR62022073 Chenopodium quinoa HOM05D003167 ORTHO05D003929 1.7e-15 86.3 103 51.5
AUR62022074 Chenopodium quinoa HOM05D003167 ORTHO05D003929 1.7e-15 86.3 103 51.5
Actinidia28941 Actinidia chinensis HOM05D003167 ORTHO05D003929 8.3e-15 84.0 52 75.0
FAN19G0600 Fragaria x ananassa HOM05D003167 ORTHO05D003929 4.1e-14 81.6 52 63.5
Os04g0558200 Oryza sativa ssp. japonica HOM05D003167 ORTHO05D003929 3.9e-12 75.1 45 64.4
Eucgr.D02277 Eucalyptus grandis HOM05D003167 ORTHO05D003929 3.3e-11 72.0 88 46.6
Hma1.2p1_2596F.1_g325110 Hydrangea macrophylla HOM05D003167 ORTHO05D003929 5.6e-11 71.2 101 41.6


User provided reference genes

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