Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000882g0110 Nicotiana tabacum HOM05D002327 ORTHO05D002306 2.5e-36 154.8 73 100.0
Nitab4.5_0001395g0010 Nicotiana tabacum HOM05D002327 ORTHO05D002306 1.5e-33 145.6 73 93.2
Nitab4.5_0000167g0320 Nicotiana tabacum HOM05D002327 ORTHO05D002306 1.7e-32 142.1 72 91.7
Nitab4.5_0007758g0030 Nicotiana tabacum HOM05D002327 ORTHO05D002306 3.7e-16 87.8 61 70.5
Nitab4.5_0000541g0120 Nicotiana tabacum HOM05D002327 ORTHO05D002306 4.9e-16 87.4 45 93.3
Nitab4.5_0006131g0010 Nicotiana tabacum HOM05D002327 ORTHO05D002306 1.4e-15 85.9 67 62.7
Nitab4.5_0003038g0020 Nicotiana tabacum HOM05D002327 ORTHO05D002306 3.5e-14 81.3 65 72.3
Nitab4.5_0001894g0070 Nicotiana tabacum HOM05D002327 ORTHO05D002306 5.9e-14 80.5 60 66.7
Nitab4.5_0000082g0010 Nicotiana tabacum HOM05D002327 ORTHO05D002306 7.8e-14 80.1 70 57.1
Nitab4.5_0000135g0060 Nicotiana tabacum HOM05D002327 ORTHO05D002306 7.8e-14 80.1 67 59.7
Nitab4.5_0006834g0030 Nicotiana tabacum HOM05D002327 ORTHO05D002306 1.5e-12 75.9 70 52.9
Peaxi162Scf00244g00139 Petunia axillaris HOM05D002327 ORTHO05D002306 5.6e-12 73.9 66 50.0
Nitab4.5_0003944g0020 Nicotiana tabacum HOM05D002327 ORTHO05D002306 9.5e-12 73.2 66 50.0
Nitab4.5_0003442g0020 Nicotiana tabacum HOM05D002327 ORTHO05D002306 2.8e-11 71.6 70 51.4
Peaxi162Scf00096g01843 Petunia axillaris HOM05D002327 ORTHO05D002306 3.6e-11 71.2 70 41.4
Peaxi162Scf00045g02132 Petunia axillaris HOM05D002327 ORTHO05D002306 4.7e-11 70.9 70 41.4
Peaxi162Scf00198g01027 Petunia axillaris HOM05D002327 ORTHO05D002306 6.1e-11 70.5 62 51.6
Peaxi162Scf00401g00528 Petunia axillaris HOM05D002327 ORTHO05D002306 6.1e-11 70.5 70 40.0
Nitab4.5_0007182g0030 Nicotiana tabacum HOM05D002327 ORTHO05D002306 8.0e-11 70.1 70 51.4
Nitab4.5_0004217g0040 Nicotiana tabacum HOM05D002327 ORTHO05D002306 1.0e-10 69.7 66 48.5
Peaxi162Scf00132g00237 Petunia axillaris HOM05D002327 ORTHO05D002306 1.0e-10 69.7 70 40.0
Peaxi162Scf00098g00034 Petunia axillaris HOM05D002327 ORTHO05D002306 2.3e-10 68.6 67 49.3
Sopen11g025290 Solanum pennellii HOM05D000004 ORTHO05D000002 2.3e-10 68.6 72 47.2
PGSC0003DMG400037214 Solanum tuberosum HOM05D002327 ORTHO05D002306 2.3e-10 68.6 66 48.5
Nitab4.5_0004970g0070 Nicotiana tabacum HOM05D002327 ORTHO05D002306 4.0e-10 67.8 38 84.2
Peaxi162Scf00294g01114 Petunia axillaris HOM05D002327 ORTHO05D002306 6.8e-10 67.0 62 51.6
Sopen01g022460 Solanum pennellii HOM05D002327 ORTHO05D002306 6.8e-10 67.0 66 48.5
Sopen02g010400 Solanum pennellii HOM05D000096 ORTHO05D000045 6.8e-10 67.0 66 48.5
Sopen02g028420 Solanum pennellii HOM05D000096 ORTHO05D000901 6.8e-10 67.0 66 48.5
Sopen03g017760 Solanum pennellii HOM05D000096 ORTHO05D000045 6.8e-10 67.0 66 48.5
Sopen03g022980 Solanum pennellii HOM05D002327 ORTHO05D002306 6.8e-10 67.0 66 48.5
Sopen09g006970 Solanum pennellii HOM05D000096 ORTHO05D000045 6.8e-10 67.0 66 48.5
Sopen10g014910 Solanum pennellii HOM05D002327 ORTHO05D002306 6.8e-10 67.0 72 47.2
Sopen12g014760 Solanum pennellii HOM05D000096 ORTHO05D000045 6.8e-10 67.0 66 48.5
PGSC0003DMG400037233 Solanum tuberosum HOM05D002327 ORTHO05D002306 6.8e-10 67.0 66 48.5
Peaxi162Scf00103g00139 Petunia axillaris HOM05D002327 ORTHO05D002306 2.6e-09 65.1 62 50.0
Nitab4.5_0000157g0290 Nicotiana tabacum HOM05D002327 ORTHO05D002306 3.4e-09 64.7 66 47.0
Sopen03g016620 Solanum pennellii HOM05D000004 ORTHO05D000002 3.4e-09 64.7 61 47.5
PGSC0003DMG400045585 Solanum tuberosum HOM05D002327 ORTHO05D002306 3.4e-09 64.7 69 49.3
Nitab4.5_0000965g0020 Nicotiana tabacum HOM05D002327 ORTHO05D002306 4.4e-09 64.3 65 50.8
Nitab4.5_0003498g0060 Nicotiana tabacum HOM05D002327 ORTHO05D002306 5.8e-09 63.9 67 44.8
Peaxi162Scf00023g00421 Petunia axillaris HOM05D002327 ORTHO05D002306 5.8e-09 63.9 62 46.8
Nitab4.5_0006645g0020 Nicotiana tabacum HOM05D002327 ORTHO05D002306 7.5e-09 63.5 66 45.5
Nitab4.5_0009133g0010 Nicotiana tabacum HOM05D002327 ORTHO05D002306 7.5e-09 63.5 40 62.5
Nitab4.5_0011705g0050 Nicotiana tabacum HOM05D002327 ORTHO05D002306 1.7e-08 62.4 52 57.7
Peaxi162Scf00013g01231 Petunia axillaris HOM05D002327 ORTHO05D002306 1.7e-08 62.4 62 48.4
Peaxi162Scf00519g00619 Petunia axillaris HOM05D002327 ORTHO05D002306 1.7e-08 62.4 62 48.4
Peaxi162Scf00001g00323 Petunia axillaris HOM05D002327 ORTHO05D002306 2.2e-08 62.0 62 46.8
Peaxi162Scf01208g00143 Petunia axillaris HOM05D002327 ORTHO05D002306 2.2e-08 62.0 61 49.2
Peaxi162Scf00441g00415 Petunia axillaris HOM05D002327 ORTHO05D002306 2.9e-08 61.6 62 46.8
PGSC0003DMG400041730 Solanum tuberosum HOM05D002327 ORTHO05D002306 3.7e-08 61.2 69 43.5
Nitab4.5_0019176g0010 Nicotiana tabacum HOM05D002327 ORTHO05D002306 4.9e-08 60.8 57 50.9
Peaxi162Scf00058g00613 Petunia axillaris HOM05D002327 ORTHO05D002306 4.9e-08 60.8 66 48.5
Peaxi162Scf00153g00007 Petunia axillaris HOM05D002327 ORTHO05D002306 6.4e-08 60.5 66 40.9
PGSC0003DMG400045054 Solanum tuberosum HOM05D002327 ORTHO05D002306 1.1e-07 59.7 69 44.9
Nitab4.5_0000108g0280 Nicotiana tabacum HOM05D002327 ORTHO05D002306 1.4e-07 59.3 71 47.9
Nitab4.5_0005313g0050 Nicotiana tabacum HOM05D002327 ORTHO05D002306 1.4e-07 59.3 56 51.8
Solyc01g017825.1 Solanum lycopersicum HOM05D002327 ORTHO05D002306 1.4e-07 59.3 72 43.1
Peaxi162Scf00006g00067 Petunia axillaris HOM05D002327 ORTHO05D002306 1.9e-07 58.9 66 40.9
Peaxi162Scf00796g00214 Petunia axillaris HOM05D002327 ORTHO05D002306 2.4e-07 58.5 60 45.0
Peaxi162Scf00141g01326 Petunia axillaris HOM05D002327 ORTHO05D002306 4.1e-07 57.8 59 42.4
Peaxi162Scf00336g00097 Petunia axillaris HOM05D002327 ORTHO05D002306 4.1e-07 57.8 62 43.5
Peaxi162Scf00634g00119 Petunia axillaris HOM05D002327 ORTHO05D002306 5.4e-07 57.4 67 43.3
Peaxi162Scf00096g01310 Petunia axillaris HOM05D002327 ORTHO05D002306 9.2e-07 56.6 68 36.8
Peaxi162Scf00050g00431 Petunia axillaris HOM05D002327 ORTHO05D002306 1.2e-06 56.2 61 39.3
Peaxi162Scf00955g00116 Petunia axillaris HOM05D002327 ORTHO05D002306 1.2e-06 56.2 66 36.4
Peaxi162Scf00229g01214 Petunia axillaris HOM05D002327 ORTHO05D002306 2.0e-06 55.5 66 39.4
Peaxi162Scf00351g00326 Petunia axillaris HOM05D002327 ORTHO05D002306 2.0e-06 55.5 66 39.4
Peaxi162Scf00398g00921 Petunia axillaris HOM05D002327 ORTHO05D002306 2.0e-06 55.5 63 42.9
Nitab4.5_0001236g0020 Nicotiana tabacum HOM05D002327 ORTHO05D002306 2.7e-06 55.1 54 44.4
Peaxi162Scf00114g00711 Petunia axillaris HOM05D002327 ORTHO05D002306 3.5e-06 54.7 62 46.8
Peaxi162Scf00343g00048 Petunia axillaris HOM05D002327 ORTHO05D002306 3.5e-06 54.7 66 36.4
Nitab4.5_0008006g0030 Nicotiana tabacum HOM05D002327 ORTHO05D002306 4.6e-06 54.3 27 85.2
Peaxi162Scf00245g00089 Petunia axillaris HOM05D002327 ORTHO05D002306 4.6e-06 54.3 66 36.4
Peaxi162Scf00271g00110 Petunia axillaris HOM05D002327 ORTHO05D002306 4.6e-06 54.3 63 38.1
Sopen10g021140 Solanum pennellii HOM05D002327 ORTHO05D002306 4.6e-06 54.3 74 37.8
Peaxi162Scf00053g00910 Petunia axillaris HOM05D002327 ORTHO05D002306 6.0e-06 53.9 66 37.9
Peaxi162Scf00248g00312 Petunia axillaris HOM05D002327 ORTHO05D002306 6.0e-06 53.9 59 40.7
Peaxi162Scf00360g00123 Petunia axillaris HOM05D002327 ORTHO05D002306 6.0e-06 53.9 66 36.4
Peaxi162Scf00872g00026 Petunia axillaris HOM05D002327 ORTHO05D002306 6.0e-06 53.9 68 38.2
Peaxi162Scf01194g00139 Petunia axillaris HOM05D002327 ORTHO05D002306 7.8e-06 53.5 66 37.9


User provided reference genes

Program Settings