Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000881g0100 Nicotiana tabacum HOM05D003702 ORTHO05D004653 1.2e-266 922.5 436 100.0
Nitab4.5_0004597g0050 Nicotiana tabacum HOM05D003702 ORTHO05D004653 5.7e-229 797.3 414 91.5
Peaxi162Scf00897g00114 Petunia axillaris HOM05D003702 ORTHO05D004653 4.8e-220 767.7 408 90.2
CAN.G139.1 Capsicum annuum HOM05D003702 ORTHO05D004653 7.7e-218 760.4 408 88.5
Solyc04g007520.3 Solanum lycopersicum HOM05D003702 ORTHO05D004653 8.0e-215 750.4 408 87.5
Sopen04g002600 Solanum pennellii HOM05D003702 ORTHO05D004653 1.0e-214 750.0 408 87.5
Peaxi162Scf00205g01127 Petunia axillaris HOM05D003702 ORTHO05D004653 2.6e-213 745.3 439 80.4
Nitab4.5_0000350g0060 Nicotiana tabacum HOM05D003702 ORTHO05D004653 3.3e-213 745.0 408 85.3
Sopen05g004420 Solanum pennellii HOM05D003702 ORTHO05D004653 7.0e-211 737.3 413 83.3
CAN.G1489.18 Capsicum annuum HOM05D003702 ORTHO05D004653 1.2e-210 736.5 413 83.3
Solyc05g008580.3 Solanum lycopersicum HOM05D003702 ORTHO05D004653 2.0e-210 735.7 413 83.1
PGSC0003DMG400030564 Solanum tuberosum HOM05D003702 ORTHO05D004653 2.7e-210 735.3 413 83.1
Nitab4.5_0003886g0040 Nicotiana tabacum HOM05D003702 ORTHO05D004653 8.5e-209 730.3 403 85.6
Sc04g0005900 Simmondsia chinensis HOM05D003702 ORTHO05D004653 4.0e-206 721.5 412 80.1
Lj6A750T93 Lonicera japonica HOM05D003702 ORTHO05D004653 5.2e-206 721.1 405 82.0
Sc14g0007250 Simmondsia chinensis HOM05D003702 ORTHO05D004653 1.2e-205 719.9 406 81.8
QL01p003075 Quercus lobata HOM05D003702 ORTHO05D004653 7.5e-205 717.2 413 79.7
GSVIVG01011808001 Vitis vinifera HOM05D003702 ORTHO05D004653 9.8e-205 716.8 408 81.6
Dinv04909 Davidia involucrata HOM05D003702 ORTHO05D004653 2.8e-204 715.3 408 81.1
arahy.Tifrunner.gnm1.ann1.A779NY Arachis hypogaea HOM05D003702 ORTHO05D004653 2.4e-203 712.2 413 79.7
Cc11_g09310 Coffea canephora HOM05D003702 ORTHO05D004653 3.1e-203 711.8 413 79.2
Nn4g24020 Nelumbo nucifera HOM05D003702 ORTHO05D004653 4.1e-203 711.4 409 80.4
Thecc.02G215000 Theobroma cacao HOM05D003702 ORTHO05D004653 7.0e-203 710.7 413 79.7
HanXRQChr17g0553131 Helianthus annuus HOM05D003702 ORTHO05D004653 9.1e-203 710.3 412 78.2
CSS0038999 Camellia sinensis var. sinensis HOM05D003702 ORTHO05D004653 1.2e-202 709.9 413 80.1
Prupe.1G319700 Prunus persica HOM05D003702 ORTHO05D004653 2.0e-202 709.1 413 78.9
Glyma.10G268300 Glycine max HOM05D003702 ORTHO05D004653 2.7e-202 708.8 412 78.6
Ah.05g167700 Amaranthus hybridus HOM05D003702 ORTHO05D004653 3.5e-202 708.4 412 78.4
MELO3C005332.2 Cucumis melo HOM05D003702 ORTHO05D004653 4.5e-202 708.0 413 78.5
MD13G1033100 Malus domestica HOM05D003702 ORTHO05D004653 4.5e-202 708.0 412 78.4
Rhsim09G0102000 Rhododendron simsii HOM05D003702 ORTHO05D004653 4.5e-202 708.0 423 78.7
RcHm_v2.0_Chr4g0434061 Rosa chinensis HOM05D003702 ORTHO05D004653 5.9e-202 707.6 413 78.5
Cfa015818 Carpinus fangiana HOM05D003702 ORTHO05D004653 7.7e-202 707.2 408 80.1
BcaB02g06576 Brassica carinata HOM05D003702 ORTHO05D004653 1.3e-201 706.4 408 80.1
FvH4_4g26430 Fragaria vesca HOM05D003702 ORTHO05D004653 1.3e-201 706.4 413 77.7
HanXRQChr14g0459241 Helianthus annuus HOM05D003702 ORTHO05D004653 2.3e-201 705.7 413 79.2
FAN07G0957 Fragaria x ananassa HOM05D003702 ORTHO05D004653 2.9e-201 705.3 413 77.7
FAN17G2320 Fragaria x ananassa HOM05D003702 ORTHO05D004653 2.9e-201 705.3 413 77.7
FAN22G0804 Fragaria x ananassa HOM05D003702 ORTHO05D004653 2.9e-201 705.3 413 77.5
MD16G1035000 Malus domestica HOM05D003702 ORTHO05D004653 2.9e-201 705.3 412 77.9
Oeu031392.1 Olea europaea HOM05D003702 ORTHO05D004653 3.8e-201 704.9 408 80.6
Duzib248G1136 Durio zibethinus HOM05D003702 ORTHO05D004653 5.0e-201 704.5 413 78.7
CiPaw.05G244900 Carya illinoinensis HOM05D003702 ORTHO05D004653 8.6e-201 703.7 413 79.4
AL1G27170 Arabidopsis lyrata HOM05D003702 ORTHO05D004653 1.1e-200 703.4 409 80.0
FAN12G3413 Fragaria x ananassa HOM05D003702 ORTHO05D004653 1.5e-200 703.0 408 78.4
CsaV3_5G028680 Cucumis sativus L. HOM05D003702 ORTHO05D004653 2.5e-200 702.2 413 78.2
Aqoxy5G03879 Aquilegia oxysepala HOM05D003702 ORTHO05D004653 3.3e-200 701.8 410 80.2
Sed0016261 Sechium edule HOM05D003702 ORTHO05D004653 3.3e-200 701.8 413 77.7
VMungo0720G1815 Vigna mungo HOM05D003702 ORTHO05D004653 3.3e-200 701.8 414 78.0
BraA06t24290Z Brassica rapa HOM05D003702 ORTHO05D004653 4.2e-200 701.4 410 79.3
CARHR015630 Cardamine hirsuta HOM05D003702 ORTHO05D004653 4.2e-200 701.4 408 80.4
Haze_00678 Corylus avellana HOM05D003702 ORTHO05D004653 4.2e-200 701.4 418 78.5
Duzib268G1865 Durio zibethinus HOM05D003702 ORTHO05D004653 4.2e-200 701.4 412 79.1
EL10Ac1g01504 Beta vulgaris HOM05D003702 ORTHO05D004653 5.5e-200 701.0 407 79.6
ECA233G3005 Erigeron canadensis HOM05D003702 ORTHO05D004653 7.2e-200 700.7 410 78.3
Phvul.007G034000 Phaseolus vulgaris HOM05D003702 ORTHO05D004653 7.2e-200 700.7 407 78.9
THA.LOC104805051 Tarenaya hassleriana HOM05D003702 ORTHO05D004653 7.2e-200 700.7 409 78.5
MSTRG.2203 Avicennia marina HOM05D003702 ORTHO05D004653 9.5e-200 700.3 408 79.9
A06p11110 Brassica napus HOM05D003702 ORTHO05D004653 9.5e-200 700.3 410 79.3
Carub.0001s1487 Capsella rubella HOM05D003702 ORTHO05D004653 9.5e-200 700.3 409 79.7
Lsat_1_v5_gn_8_41841 Lactuca sativa HOM05D003702 ORTHO05D004653 9.5e-200 700.3 416 78.4
AT1G15110 Arabidopsis thaliana HOM05D003702 ORTHO05D004653 1.2e-199 699.9 409 79.5
Gohir.D09G004400 Gossypium hirsutum HOM05D003702 ORTHO05D004653 1.2e-199 699.9 413 78.0
SalBow8G2252 Salvia bowleyana HOM05D003702 ORTHO05D004653 1.2e-199 699.9 408 79.9
TAR371G0966 Trochodendron aralioides HOM05D003702 ORTHO05D004653 1.2e-199 699.9 413 78.5
C05p13230 Brassica napus HOM05D003702 ORTHO05D004653 2.1e-199 699.1 410 79.0
BolC5t30060H Brassica oleracea HOM05D003702 ORTHO05D004653 2.1e-199 699.1 410 79.0
DCAR_030184 Daucus carota HOM05D003702 ORTHO05D004653 2.1e-199 699.1 413 78.5
Thhalv10007726m.g Eutrema salsugineum HOM05D003702 ORTHO05D004653 2.1e-199 699.1 408 79.7
Migut.E00388 Erythranthe guttata HOM05D003702 ORTHO05D004653 2.8e-199 698.7 408 79.7
Sp1g13450 Schrenkiella parvula HOM05D003702 ORTHO05D004653 2.8e-199 698.7 408 79.4
Manes.14G109300 Manihot esculenta HOM05D003702 ORTHO05D004653 3.6e-199 698.4 413 78.5
CiPaw.06G015200 Carya illinoinensis HOM05D003702 ORTHO05D004653 4.7e-199 698.0 414 78.0
Ca_30213_v3 Cicer arietinum L. HOM05D003702 ORTHO05D004653 4.7e-199 698.0 408 79.4
Ciclev10015341m.g Citrus clementina HOM05D003702 ORTHO05D004653 4.7e-199 698.0 412 78.2
Glyma.20G122800 Glycine max HOM05D003702 ORTHO05D004653 4.7e-199 698.0 407 78.6
COL.COLO4_38548 Corchorus olitorius HOM05D003702 ORTHO05D004653 6.1e-199 697.6 408 78.9
Eucgr.B02865 Eucalyptus grandis HOM05D003702 ORTHO05D004653 8.0e-199 697.2 416 78.4
Gohir.A09G005100 Gossypium hirsutum HOM05D003702 ORTHO05D004653 1.0e-198 696.8 413 77.2
Gorai.006G006000 Gossypium raimondii HOM05D003702 ORTHO05D004653 1.4e-198 696.4 413 77.7
TWI75G1265 Tripterygium wilfordii HOM05D003702 ORTHO05D004653 1.4e-198 696.4 413 77.7
Lalb_Chr21g0308661 Lupinus albus HOM05D003702 ORTHO05D004653 1.8e-198 696.0 407 79.6
BraA09t41530Z Brassica rapa HOM05D003702 ORTHO05D004653 2.3e-198 695.7 408 78.7
A09p61570 Brassica napus HOM05D003702 ORTHO05D004653 4.0e-198 694.9 407 78.9
MBI10_g06746_MAGBIO Magnolia biondii HOM05D003702 ORTHO05D004653 4.0e-198 694.9 405 81.2
arahy.Tifrunner.gnm1.ann1.8F881C Arachis hypogaea HOM05D003702 ORTHO05D004653 5.2e-198 694.5 387 82.2
Gohir.A12G141400 Gossypium hirsutum HOM05D003702 ORTHO05D004653 5.2e-198 694.5 408 79.2
Gohir.D12G146300 Gossypium hirsutum HOM05D003702 ORTHO05D004653 5.2e-198 694.5 408 79.2
Gorai.008G157600 Gossypium raimondii HOM05D003702 ORTHO05D004653 5.2e-198 694.5 408 79.2
TPR.G4874 Trifolium pratense HOM05D003702 ORTHO05D004653 1.5e-197 693.0 407 78.9
MSTRG.7632 Avicennia marina HOM05D003702 ORTHO05D004653 2.0e-197 692.6 408 80.1
FAN12G0213 Fragaria x ananassa HOM05D003702 ORTHO05D004653 2.6e-197 692.2 404 78.2
BolC8t52064H Brassica oleracea HOM05D003702 ORTHO05D004653 4.4e-197 691.4 408 78.2
BcaC05g25442 Brassica carinata HOM05D003702 ORTHO05D004653 7.5e-197 690.6 410 78.3
BcaNung05515 Brassica carinata HOM05D003702 ORTHO05D004653 7.5e-197 690.6 407 78.4
C08p45160 Brassica napus HOM05D003702 ORTHO05D004653 7.5e-197 690.6 407 78.4
Manes.06G063400 Manihot esculenta HOM05D003702 ORTHO05D004653 1.3e-196 689.9 408 76.7
Potri.008G126100 Populus trichocarpa HOM05D003702 ORTHO05D004653 1.3e-196 689.9 412 76.5
PSO478G4444 Papaver somniferum HOM05D003702 ORTHO05D004653 1.7e-196 689.5 415 77.3
PGR102G2387 Punica granatum HOM05D003702 ORTHO05D004653 1.7e-196 689.5 413 76.8
Atru.chr11.329 Acer truncatum HOM05D003702 ORTHO05D004653 2.2e-196 689.1 407 78.4
Lalb_Chr02g0145651 Lupinus albus HOM05D003702 ORTHO05D004653 2.2e-196 689.1 409 78.2
Lj5g0010985 Lotus japonicus HOM05D003702 ORTHO05D004653 1.1e-195 686.8 413 77.2
PSO017G5274 Papaver somniferum HOM05D003702 ORTHO05D004653 1.8e-195 686.0 415 76.9
Potri.010G117500 Populus trichocarpa HOM05D003702 ORTHO05D004653 1.8e-195 686.0 412 77.2
vmacro12220 Vaccinium macrocarpon HOM05D003702 ORTHO05D004653 1.8e-195 686.0 469 70.8
Medtr1g109120 Medicago truncatula HOM05D003702 ORTHO05D004653 3.1e-195 685.3 414 77.3
Sabra08G0095000 Salix brachista HOM05D003702 ORTHO05D004653 4.1e-195 684.9 412 76.0
Oeu036128.1 Olea europaea HOM05D003702 ORTHO05D004653 7.0e-195 684.1 407 78.6
MSTRG.874 Avicennia marina HOM05D003702 ORTHO05D004653 1.6e-194 682.9 408 78.4
Sabra10G0086900 Salix brachista HOM05D003702 ORTHO05D004653 2.7e-194 682.2 440 73.6
Sabra10G0088500 Salix brachista HOM05D003702 ORTHO05D004653 2.7e-194 682.2 440 73.6
GSVIVG01008367001 Vitis vinifera HOM05D003702 ORTHO05D004653 3.5e-194 681.8 413 75.5
MELO3C012286.2 Cucumis melo HOM05D003702 ORTHO05D004653 7.8e-194 680.6 445 72.1
ATR0691G123 Amborella trichopoda HOM05D003702 ORTHO05D004653 1.7e-193 679.5 412 76.2
ECA246G4421 Erigeron canadensis HOM05D003702 ORTHO05D004653 2.3e-193 679.1 412 75.7
CsaV3_5G034740 Cucumis sativus L. HOM05D003702 ORTHO05D004653 1.9e-192 676.0 445 71.7
Lalb_Chr06g0165751 Lupinus albus HOM05D003702 ORTHO05D004653 5.6e-192 674.5 417 75.8
Zm00001eb334750 Zea mays HOM05D003702 ORTHO05D004653 3.1e-190 668.7 415 75.9
Sed0021449 Sechium edule HOM05D003702 ORTHO05D004653 2.2e-188 662.5 445 70.8
Dinv16161 Davidia involucrata HOM05D003702 ORTHO05D004653 1.4e-187 659.8 378 80.4
Lsat_1_v5_gn_3_56601 Lactuca sativa HOM05D003702 ORTHO05D004653 4.1e-187 658.3 422 73.0
Zm00001eb343120 Zea mays HOM05D003702 ORTHO05D004653 1.1e-182 643.7 380 77.1
ClCG01G006000 Citrullus lanatus HOM05D003702 ORTHO05D004653 1.8e-182 642.9 378 78.0
Os05g0554400 Oryza sativa ssp. japonica HOM05D003702 ORTHO05D004653 4.0e-182 641.7 402 74.1
Psat6g222840 Pisum sativum HOM05D003702 ORTHO05D004653 1.5e-181 639.8 377 79.3
AUR62037259 Chenopodium quinoa HOM05D003702 ORTHO05D004653 3.4e-181 638.6 385 76.6
Zm00001eb295120 Zea mays HOM05D003702 ORTHO05D004653 4.4e-181 638.3 412 72.3
vmacro10616 Vaccinium macrocarpon HOM05D003702 ORTHO05D004653 7.5e-181 637.5 475 65.5
Migut.L01016 Erythranthe guttata HOM05D003702 ORTHO05D004653 2.2e-180 636.0 408 75.0
CDE07G1100 Ceratophyllum demersum HOM05D003702 ORTHO05D004653 1.9e-179 632.9 376 76.6
SalBow8G5575 Salvia bowleyana HOM05D003702 ORTHO05D004653 7.8e-178 627.5 419 72.8
BcaB03g14561 Brassica carinata HOM05D003702 ORTHO05D004653 3.0e-177 625.5 353 80.7
unitig_746.g26864 Utricularia gibba HOM05D003702 ORTHO05D004653 6.6e-177 624.4 422 70.4
Aa31LG1G40 Aethionema arabicum HOM05D003702 ORTHO05D004653 1.1e-176 623.6 421 71.5
HPP92_026069 Vanilla planifolia HOM05D003702 ORTHO05D004653 9.9e-173 610.5 379 74.1
CDE06G0787 Ceratophyllum demersum HOM05D003702 ORTHO05D004653 3.3e-168 595.5 412 68.2
Sed0022429 Sechium edule HOM05D003702 ORTHO05D004653 1.7e-164 583.2 332 80.1
Pp3c4_15740 Physcomitrium patens HOM05D003702 ORTHO05D004653 3.2e-163 578.9 377 69.8
Zm00001eb125990 Zea mays HOM05D003702 ORTHO05D004653 1.6e-162 576.6 327 82.0
HPP92_008281 Vanilla planifolia HOM05D003702 ORTHO05D004653 3.9e-161 572.0 339 76.4
SGA_v2.0_scaffold14G06919 Striga asiatica HOM05D003702 ORTHO05D004653 1.5e-160 570.1 408 68.6
Hund20721 Selenicereus undatus HOM05D003702 ORTHO05D004653 2.4e-158 562.8 312 82.4
Mapoly0057s0110 Marchantia polymorpha HOM05D003702 ORTHO05D004653 9.0e-158 560.8 380 66.8
Pp3c26_4170 Physcomitrium patens HOM05D003702 ORTHO05D004653 1.2e-149 533.9 408 60.5
AagrBONN_evm.TU.Sc2ySwM_117.3898 Anthoceros agrestis HOM05D003702 ORTHO05D004653 6.7e-145 518.1 339 69.6
ClCG05G022350 Citrullus lanatus HOM05D003702 ORTHO05D004653 2.9e-140 502.7 409 61.4
SGA_v2.0_scaffold170G38819 Striga asiatica HOM05D003702 ORTHO05D004653 1.3e-137 493.8 420 60.0
HPP92_021847 Vanilla planifolia HOM05D003702 ORTHO05D004653 1.5e-133 480.3 350 67.7
TAR629G3334 Trochodendron aralioides HOM05D003702 ORTHO05D004653 6.3e-127 458.4 294 73.8
Duzib251G0696 Durio zibethinus HOM05D003702 ORTHO05D004653 6.5e-124 448.4 378 60.3
Oeu048389.1 Olea europaea HOM05D003702 ORTHO05D004653 9.7e-120 434.5 257 79.8
Sed0018132 Sechium edule HOM05D003702 ORTHO05D004653 9.7e-120 434.5 325 65.5
Actinidia16697 Actinidia chinensis HOM05D003702 ORTHO05D004653 1.5e-117 427.2 438 52.3
Aqoxy6G00508 Aquilegia oxysepala HOM05D003702 ORTHO05D004653 4.5e-109 399.1 207 86.0
AUR62002771 Chenopodium quinoa HOM05D003702 ORTHO05D004653 1.1e-107 394.4 212 82.5
Zm00001eb103650 Zea mays HOM05D003702 ORTHO05D004653 1.8e-86 323.9 230 68.3
MCO02G069 Micromonas commoda HOM05D003702 ORTHO05D004653 1.5e-80 304.3 321 45.2
SMO116G0260 Selaginella moellendorffii HOM05D003702 ORTHO05D004653 2.0e-80 303.9 188 71.3
CSS0044058 Camellia sinensis var. sinensis HOM05D003702 ORTHO05D004653 5.7e-80 302.4 152 86.2
Cpa.g.sc65.87 Carica papaya HOM05D003702 ORTHO05D004653 7.0e-70 268.9 188 69.7
Os01g0118300 Oryza sativa ssp. japonica HOM05D003702 ORTHO05D004653 4.6e-61 239.6 177 67.8
Aqoxy7G02147 Aquilegia oxysepala HOM05D003702 ORTHO05D004653 6.0e-61 239.2 149 73.8
Zm00001eb335270 Zea mays HOM05D003702 ORTHO05D004653 3.9e-60 236.5 169 68.6
CSS0004358 Camellia sinensis var. sinensis HOM05D003702 ORTHO05D004653 3.3e-59 233.4 132 81.8
Os01g0683550 Oryza sativa ssp. japonica HOM05D003702 ORTHO05D004653 2.3e-52 210.7 193 54.4
Aqoxy6G00509 Aquilegia oxysepala HOM05D003702 ORTHO05D004653 5.6e-51 206.1 128 76.6
CSS0043066 Camellia sinensis var. sinensis HOM05D003702 ORTHO05D004653 5.8e-48 196.1 127 75.6
SEGI_02132 Sequoiadendron giganteum HOM05D003702 ORTHO05D004653 4.9e-39 166.4 99 78.8
Zm00001eb294100 Zea mays HOM05D003702 ORTHO05D004653 1.4e-38 164.9 121 66.9
Zm00001eb371470 Zea mays HOM05D003702 ORTHO05D004653 7.9e-37 159.1 98 72.4
Zm00001eb367010 Zea mays HOM05D003702 ORTHO05D004653 3.1e-33 147.1 92 71.7
C07p19070 Brassica napus HOM05D003702 ORTHO05D014526 7.6e-32 142.5 131 54.2
BolC5t33656H Brassica oleracea HOM05D003702 ORTHO05D014526 7.6e-32 142.5 114 61.4
C05p31130 Brassica napus HOM05D003702 ORTHO05D014526 4.9e-31 139.8 131 55.0
BolC7t42416H Brassica oleracea HOM05D003702 ORTHO05D014526 4.9e-31 139.8 100 64.0
Lsat_1_v5_gn_0_25341 Lactuca sativa HOM05D006132 ORTHO05D007305 4.9e-31 139.8 93 67.7
PRCOL_00004560 Prasinoderma coloniale HOM05D003702 ORTHO05D004653 1.8e-28 131.3 216 34.7
BcaC07g40935 Brassica carinata HOM05D003702 ORTHO05D014526 3.8e-23 113.6 75 64.0
BolC4t27595H Brassica oleracea HOM05D003702 ORTHO05D014526 1.1e-22 112.1 72 66.7
BcaC01g03963 Brassica carinata HOM05D003702 ORTHO05D014526 1.9e-22 111.3 72 65.3
C08p39290 Brassica napus HOM05D003702 ORTHO05D014526 1.9e-22 111.3 72 65.3
BolC3t21317H Brassica oleracea HOM05D003702 ORTHO05D014526 1.0e-20 105.5 72 63.9
Aqoxy7G02189 Aquilegia oxysepala HOM05D003702 ORTHO05D004653 3.9e-20 103.6 78 65.4
SHI16230 Sapria himalayana HOM05D000105 ORTHO05D000023 1.5e-16 91.7 121 43.8
BcaC06g35173 Brassica carinata HOM05D005941 ORTHO05D007879 2.7e-13 80.9 58 62.1
BolC6t37169H Brassica oleracea HOM05D003702 ORTHO05D019976 2.5e-11 74.3 80 43.8
BcaC02g07984 Brassica carinata HOM05D003702 ORTHO05D014526 7.2e-06 56.2 34 61.8


User provided reference genes

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