Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000881g0030 Nicotiana tabacum HOM05D002761 ORTHO05D003351 1.8e-72 275.8 139 100.0
Dinv15069 Davidia involucrata HOM05D002761 ORTHO05D003351 8.6e-30 134.0 151 52.3
CSS0019088 Camellia sinensis var. sinensis HOM05D002761 ORTHO05D003351 4.3e-29 131.7 151 51.0
TAR381G1193 Trochodendron aralioides HOM05D002761 ORTHO05D003351 6.2e-28 127.9 150 51.3
Nitab4.5_0000167g0140 Nicotiana tabacum HOM05D002761 ORTHO05D003351 8.1e-28 127.5 150 52.7
Oeu021213.2 Olea europaea HOM05D002761 ORTHO05D003351 1.1e-27 127.1 150 52.0
Hma1.2p1_0523F.1_g172030 Hydrangea macrophylla HOM05D002761 ORTHO05D003351 1.4e-27 126.7 151 49.7
Sopen11g009830 Solanum pennellii HOM05D002761 ORTHO05D003351 1.8e-27 126.3 150 52.0
vmacro12482 Vaccinium macrocarpon HOM05D002761 ORTHO05D003351 1.8e-27 126.3 138 52.2
Lj5g0020162 Lotus japonicus HOM05D002761 ORTHO05D003351 6.8e-27 124.4 150 50.7
Solyc11g018770.3 Solanum lycopersicum HOM05D002761 ORTHO05D003351 6.8e-27 124.4 150 51.3
Sopen11g009950 Solanum pennellii HOM05D002761 ORTHO05D003351 6.8e-27 124.4 150 51.3
Aqoxy5G00310 Aquilegia oxysepala HOM05D002761 ORTHO05D003351 8.9e-27 124.0 153 49.0
Migut.C01266 Erythranthe guttata HOM05D002761 ORTHO05D003351 1.2e-26 123.6 148 50.0
QL03p042862 Quercus lobata HOM05D002761 ORTHO05D003351 1.5e-26 123.2 150 51.3
Eucgr.F03976 Eucalyptus grandis HOM05D002761 ORTHO05D003351 2.0e-26 122.9 151 48.3
Lalb_Chr06g0161951 Lupinus albus HOM05D002761 ORTHO05D003351 2.0e-26 122.9 150 49.3
Nn5g27660 Nelumbo nucifera HOM05D002761 ORTHO05D003351 2.6e-26 122.5 150 48.0
Actinidia23337 Actinidia chinensis HOM05D002761 ORTHO05D003351 3.4e-26 122.1 148 49.3
COL.COLO4_23637 Corchorus olitorius HOM05D002761 ORTHO05D003351 3.4e-26 122.1 148 50.7
HanXRQChr09g0263631 Helianthus annuus HOM05D002761 ORTHO05D003351 3.4e-26 122.1 151 47.7
unitig_747.g21798 Utricularia gibba HOM05D002761 ORTHO05D003351 3.4e-26 122.1 151 47.7
Oeu045162.1 Olea europaea HOM05D002761 ORTHO05D003351 4.4e-26 121.7 150 50.0
SalBow7G0542 Salvia bowleyana HOM05D002761 ORTHO05D003351 4.4e-26 121.7 150 49.3
Atru.chr4.2860 Acer truncatum HOM05D002761 ORTHO05D003351 5.8e-26 121.3 150 50.0
CAN.G761.16 Capsicum annuum HOM05D002761 ORTHO05D003351 5.8e-26 121.3 150 51.3
Glyma.10G217700 Glycine max HOM05D002761 ORTHO05D003351 5.8e-26 121.3 150 49.3
Lj5A633T18 Lonicera japonica HOM05D002761 ORTHO05D003351 5.8e-26 121.3 138 49.3
Lj5A657T12 Lonicera japonica HOM05D002761 ORTHO05D003351 7.6e-26 120.9 138 49.3
Rhsim03G0083700 Rhododendron simsii HOM05D002761 ORTHO05D003351 7.6e-26 120.9 148 49.3
Sed0017641 Sechium edule HOM05D002761 ORTHO05D003351 7.6e-26 120.9 151 49.0
GSVIVG01034848001 Vitis vinifera HOM05D002761 ORTHO05D003351 7.6e-26 120.9 150 50.0
CiPaw.05G166400 Carya illinoinensis HOM05D002761 ORTHO05D003351 9.9e-26 120.6 150 50.0
Psat6g173240 Pisum sativum HOM05D002761 ORTHO05D003351 9.9e-26 120.6 151 49.0
ClCG08G008700 Citrullus lanatus HOM05D002761 ORTHO05D003351 1.7e-25 119.8 149 48.3
Lj5C648G5 Lonicera japonica HOM05D002761 ORTHO05D003351 1.7e-25 119.8 138 48.6
Lj8A206G29 Lonicera japonica HOM05D002761 ORTHO05D003351 1.7e-25 119.8 150 48.7
Ah.05g178240 Amaranthus hybridus HOM05D002761 ORTHO05D003351 2.2e-25 119.4 148 47.3
CsaV3_6G004730 Cucumis sativus L. HOM05D002761 ORTHO05D003351 2.2e-25 119.4 151 48.3
CDE04G1174 Ceratophyllum demersum HOM05D002761 ORTHO05D003351 2.9e-25 119.0 138 50.7
Peaxi162Scf01013g00232 Petunia axillaris HOM05D002761 ORTHO05D003351 2.9e-25 119.0 132 53.8
Prupe.6G147900 Prunus persica HOM05D002761 ORTHO05D003351 2.9e-25 119.0 151 47.7
Sc01g0001830 Simmondsia chinensis HOM05D002761 ORTHO05D003351 2.9e-25 119.0 148 47.3
SGA_v2.0_scaffold118G32501 Striga asiatica HOM05D002761 ORTHO05D003351 2.9e-25 119.0 151 48.3
CANSAT54G2022 Cannabis sativa HOM05D002761 ORTHO05D003351 3.7e-25 118.6 150 47.3
Gohir.D05G253400 Gossypium hirsutum HOM05D002761 ORTHO05D003351 3.7e-25 118.6 148 50.0
Lj5A652T14 Lonicera japonica HOM05D002761 ORTHO05D003351 3.7e-25 118.6 138 49.3
Sed0000900 Sechium edule HOM05D002761 ORTHO05D003351 3.7e-25 118.6 151 49.0
Cfa015122 Carpinus fangiana HOM05D002761 ORTHO05D003351 4.9e-25 118.2 150 49.3
Gohir.A05G250400 Gossypium hirsutum HOM05D002761 ORTHO05D003351 4.9e-25 118.2 148 50.0
MD10G1052700 Malus domestica HOM05D002761 ORTHO05D003351 4.9e-25 118.2 151 47.0
SHI09025 Sapria himalayana HOM05D002761 ORTHO05D003351 4.9e-25 118.2 147 49.7
Hund27091 Selenicereus undatus HOM05D002761 ORTHO05D003351 4.9e-25 118.2 150 46.0
ATR0584G032 Amborella trichopoda HOM05D002761 ORTHO05D003351 6.4e-25 117.9 150 48.0
DCAR_001058 Daucus carota HOM05D002761 ORTHO05D003351 6.4e-25 117.9 151 46.4
Gorai.009G263600 Gossypium raimondii HOM05D002761 ORTHO05D003351 6.4e-25 117.9 148 49.3
HPP92_003659 Vanilla planifolia HOM05D002761 ORTHO05D003351 6.4e-25 117.9 150 48.0
MELO3C019943.2 Cucumis melo HOM05D002761 ORTHO05D003351 8.4e-25 117.5 151 47.7
Glyma.20G174400 Glycine max HOM05D002761 ORTHO05D003351 8.4e-25 117.5 150 48.0
Lj5C636G2 Lonicera japonica HOM05D002761 ORTHO05D003351 8.4e-25 117.5 123 52.0
Thecc.08G185200 Theobroma cacao HOM05D002761 ORTHO05D003351 8.4e-25 117.5 148 50.0
FvH4_4g33440 Fragaria vesca HOM05D002761 ORTHO05D003351 1.1e-24 117.1 150 46.7
FAN12G1608 Fragaria x ananassa HOM05D002761 ORTHO05D003351 1.1e-24 117.1 150 46.7
PGR042G3223 Punica granatum HOM05D002761 ORTHO05D003351 1.1e-24 117.1 148 48.6
SGA_v2.0_scaffold24G10561 Striga asiatica HOM05D002761 ORTHO05D003351 1.1e-24 117.1 148 48.6
Atru.chr13.1730 Acer truncatum HOM05D002761 ORTHO05D003351 1.4e-24 116.7 143 50.3
arahy.Tifrunner.gnm1.ann1.BB8XW9 Arachis hypogaea HOM05D002761 ORTHO05D003351 1.4e-24 116.7 162 46.3
Eucgr.F02738 Eucalyptus grandis HOM05D002761 ORTHO05D003351 1.4e-24 116.7 151 46.4
FAN07G1831 Fragaria x ananassa HOM05D002761 ORTHO05D003351 1.4e-24 116.7 150 46.7
FAN22G1178 Fragaria x ananassa HOM05D002761 ORTHO05D003351 1.4e-24 116.7 150 46.7
Lj5A618G15 Lonicera japonica HOM05D002761 ORTHO05D003351 1.4e-24 116.7 120 51.7
AagrBONN_evm.TU.Sc2ySwM_344.827 Anthoceros agrestis HOM05D002761 ORTHO05D003351 1.9e-24 116.3 150 46.7
Phvul.007G088400 Phaseolus vulgaris HOM05D002761 ORTHO05D003351 1.9e-24 116.3 150 48.7
A07p14260 Brassica napus HOM05D002761 ORTHO05D003351 2.4e-24 115.9 138 50.7
C07p20980 Brassica napus HOM05D002761 ORTHO05D003351 2.4e-24 115.9 138 50.7
Lsat_1_v5_gn_4_165000 Lactuca sativa HOM05D002761 ORTHO05D003351 2.4e-24 115.9 148 49.3
RcHm_v2.0_Chr4g0442691 Rosa chinensis HOM05D002761 ORTHO05D003351 2.4e-24 115.9 150 46.0
arahy.Tifrunner.gnm1.ann1.8YT8MI Arachis hypogaea HOM05D002761 ORTHO05D003351 3.2e-24 115.5 162 46.3
BraA07t29183Z Brassica rapa HOM05D002761 ORTHO05D003351 3.2e-24 115.5 138 50.0
Eucgr.K02157 Eucalyptus grandis HOM05D002761 ORTHO05D003351 3.2e-24 115.5 151 45.7
Mapoly0174s0023 Marchantia polymorpha HOM05D002761 ORTHO05D003351 3.2e-24 115.5 137 48.2
arahy.Tifrunner.gnm1.ann1.5UEM0D Arachis hypogaea HOM05D002761 ORTHO05D003351 4.1e-24 115.2 150 48.0
arahy.Tifrunner.gnm1.ann1.984TS9 Arachis hypogaea HOM05D002761 ORTHO05D003351 4.1e-24 115.2 150 48.0
ECA248G3699 Erigeron canadensis HOM05D003159 ORTHO05D003780 4.1e-24 115.2 151 46.4
HanXRQChr15g0490731 Helianthus annuus HOM05D002761 ORTHO05D003351 4.1e-24 115.2 150 48.0
Lj5A655T26 Lonicera japonica HOM05D002761 ORTHO05D003351 4.1e-24 115.2 154 44.2
TPR.G15701 Trifolium pratense HOM05D002761 ORTHO05D003351 4.1e-24 115.2 148 48.6
ECA232G2507 Erigeron canadensis HOM05D002761 ORTHO05D003351 5.4e-24 114.8 151 46.4
arahy.Tifrunner.gnm1.ann1.Q9M74Z Arachis hypogaea HOM05D002761 ORTHO05D003351 7.1e-24 114.4 150 47.3
BcaC06g34983 Brassica carinata HOM05D002761 ORTHO05D003351 7.1e-24 114.4 138 50.0
Ciclev10000691m.g Citrus clementina HOM05D002761 ORTHO05D003351 7.1e-24 114.4 150 46.0
Eucgr.F02604 Eucalyptus grandis HOM05D002761 ORTHO05D003351 7.1e-24 114.4 151 45.7
Lsat_1_v5_gn_6_104880 Lactuca sativa HOM05D002761 ORTHO05D003351 7.1e-24 114.4 148 48.6
Medtr1g096870 Medicago truncatula HOM05D002761 ORTHO05D003351 7.1e-24 114.4 150 46.0
Lj5A654G16 Lonicera japonica HOM05D002761 ORTHO05D003351 9.2e-24 114.0 158 43.0
Potri.013G111300 Populus trichocarpa HOM05D002761 ORTHO05D003351 9.2e-24 114.0 150 48.7
RcHm_v2.0_Chr7g0192731 Rosa chinensis HOM05D002761 ORTHO05D003351 9.2e-24 114.0 138 47.8
VMungo0720G1634 Vigna mungo HOM05D002761 ORTHO05D003351 9.2e-24 114.0 150 48.0
Sp1g20170 Schrenkiella parvula HOM05D002761 ORTHO05D003351 1.2e-23 113.6 138 50.7
BcaB03g14191 Brassica carinata HOM05D002761 ORTHO05D003351 1.6e-23 113.2 138 50.0
CARHR023030 Cardamine hirsuta HOM05D002761 ORTHO05D003351 1.6e-23 113.2 138 49.3
Thhalv10007128m.g Eutrema salsugineum HOM05D002761 ORTHO05D003351 1.6e-23 113.2 138 50.7
RcHm_v2.0_Chr4g0411681 Rosa chinensis HOM05D002761 ORTHO05D003351 1.6e-23 113.2 150 44.0
BolC7t42629H Brassica oleracea HOM05D002761 ORTHO05D003351 2.1e-23 112.8 138 49.3
Carub.0001s2218 Capsella rubella HOM05D002761 ORTHO05D003351 2.7e-23 112.5 138 50.0
THA.LOC104809739 Tarenaya hassleriana HOM05D002761 ORTHO05D003351 2.7e-23 112.5 147 46.9
FAN17G0376 Fragaria x ananassa HOM05D002761 ORTHO05D003351 3.5e-23 112.1 150 45.3
AT1G22660 Arabidopsis thaliana HOM05D002761 ORTHO05D003351 4.6e-23 111.7 138 49.3
Lj5A658G21 Lonicera japonica HOM05D002761 ORTHO05D003351 6.0e-23 111.3 158 42.4
PSO210G0794 Papaver somniferum HOM05D002761 ORTHO05D003351 6.0e-23 111.3 137 46.7
PSO339G2349 Papaver somniferum HOM05D002761 ORTHO05D003351 6.0e-23 111.3 152 47.4
AL1G36200 Arabidopsis lyrata HOM05D002761 ORTHO05D003351 7.8e-23 110.9 138 49.3
C05p21800 Brassica napus HOM05D002761 ORTHO05D003351 7.8e-23 110.9 138 49.3
A09p42070 Brassica napus HOM05D002761 ORTHO05D003351 1.0e-22 110.5 138 49.3
BolC5t30873H Brassica oleracea HOM05D002761 ORTHO05D003351 1.0e-22 110.5 138 49.3
BraA09t39693Z Brassica rapa HOM05D002761 ORTHO05D003351 1.0e-22 110.5 138 49.3
Cpa.g.sc66.29 Carica papaya HOM05D002761 ORTHO05D003351 1.0e-22 110.5 147 46.9
Zm00001eb408070 Zea mays HOM05D002761 ORTHO05D003351 1.3e-22 110.2 150 46.0
PSO063G6902 Papaver somniferum HOM05D002761 ORTHO05D003351 1.7e-22 109.8 148 45.3
arahy.Tifrunner.gnm1.ann1.SG3J5R Arachis hypogaea HOM05D002761 ORTHO05D003351 3.0e-22 109.0 161 44.7
PSO832G2735 Papaver somniferum HOM05D002761 ORTHO05D003351 3.0e-22 109.0 137 46.0
Thecc.10G143100 Theobroma cacao HOM05D002761 ORTHO05D003351 3.9e-22 108.6 148 47.3
arahy.Tifrunner.gnm1.ann1.3C4BUC Arachis hypogaea HOM05D002761 ORTHO05D003351 6.6e-22 107.8 161 44.7
PSO170G5134 Papaver somniferum HOM05D002761 ORTHO05D003351 6.6e-22 107.8 148 45.3
TWI60G0671 Tripterygium wilfordii HOM05D002761 ORTHO05D003351 8.6e-22 107.5 150 46.0
HanXRQChr14g0449031 Helianthus annuus HOM05D002761 ORTHO05D003351 1.5e-21 106.7 157 44.6
Manes.18G102400 Manihot esculenta HOM05D002761 ORTHO05D003351 1.5e-21 106.7 138 48.6
Os12g0171200 Oryza sativa ssp. japonica HOM05D002761 ORTHO05D003351 1.5e-21 106.7 144 43.8
A08p03170 Brassica napus HOM05D002761 ORTHO05D003351 3.3e-21 105.5 141 45.4
BraA08t32349Z Brassica rapa HOM05D002761 ORTHO05D003351 3.3e-21 105.5 141 45.4
TWI34G1193 Tripterygium wilfordii HOM05D002761 ORTHO05D003351 3.3e-21 105.5 150 45.3
Aa31LG7G6560 Aethionema arabicum HOM05D002761 ORTHO05D003351 1.6e-20 103.2 138 45.7
Aqoxy4G00115 Aquilegia oxysepala HOM05D002761 ORTHO05D003351 1.6e-20 103.2 155 45.2
Pp3c4_17390 Physcomitrium patens HOM05D002761 ORTHO05D003351 1.6e-20 103.2 138 42.8
ECA238G1828 Erigeron canadensis HOM05D002761 ORTHO05D003351 3.1e-19 99.0 147 44.2
AagrBONN_evm.TU.Sc2ySwM_117.2494 Anthoceros agrestis HOM05D002761 ORTHO05D003351 8.9e-19 97.4 129 48.8
SMO172G0205 Selaginella moellendorffii HOM05D002761 ORTHO05D003351 1.5e-18 96.7 154 40.3
Lj4A473G33 Lonicera japonica HOM05D002761 ORTHO05D003351 3.4e-18 95.5 161 41.0
Nitab4.5_0001579g0100 Nicotiana tabacum HOM05D002761 ORTHO05D003351 5.8e-18 94.7 154 42.9
SMO351G0639 Selaginella moellendorffii HOM05D002761 ORTHO05D003351 7.6e-18 94.4 135 41.5
Lj5A650G23 Lonicera japonica HOM05D002761 ORTHO05D003351 1.7e-17 93.2 69 62.3
LjContig00141g0028023 Lotus japonicus HOM05D002761 ORTHO05D003351 2.2e-17 92.8 146 45.2
PSO339G0065 Papaver somniferum HOM05D002761 ORTHO05D003351 2.2e-17 92.8 151 39.7
SMO111G0222 Selaginella moellendorffii HOM05D002761 ORTHO05D003351 2.9e-17 92.4 131 42.7
Medtr1g096810 Medicago truncatula HOM05D002761 ORTHO05D003351 3.8e-17 92.0 151 42.4
HPP92_003668 Vanilla planifolia HOM05D002761 ORTHO05D003351 4.9e-17 91.7 133 45.9
QL08p012947 Quercus lobata HOM05D002761 ORTHO05D003351 8.4e-17 90.9 139 44.6
SMO111G0069 Selaginella moellendorffii HOM05D002761 ORTHO05D003351 1.1e-16 90.5 131 42.0
EL10Ac1g00094 Beta vulgaris HOM05D002761 ORTHO05D003351 2.4e-16 89.4 133 45.1
BcaC07g41804 Brassica carinata HOM05D002761 ORTHO05D003351 4.2e-16 88.6 122 42.6
QL08p012793 Quercus lobata HOM05D002761 ORTHO05D003351 4.2e-16 88.6 139 43.9
Lj5A645T12 Lonicera japonica HOM05D002761 ORTHO05D003351 5.4e-16 88.2 112 46.4
BcaB08g37366 Brassica carinata HOM05D002761 ORTHO05D003351 9.3e-16 87.4 125 41.6
AUR62004635 Chenopodium quinoa HOM05D002761 ORTHO05D003351 2.1e-15 86.3 120 44.2
Haze_01552 Corylus avellana HOM05D002761 ORTHO05D003351 2.7e-15 85.9 150 42.7
Lj5A669G11 Lonicera japonica HOM05D002761 ORTHO05D003351 3.5e-15 85.5 131 41.2
PRCOL_00003563 Prasinoderma coloniale HOM05D002761 ORTHO05D003351 3.5e-15 85.5 137 36.5
Aqoxy1G03087 Aquilegia oxysepala HOM05D002761 ORTHO05D003351 4.6e-15 85.1 127 45.7
Lsat_1_v5_gn_4_165020 Lactuca sativa HOM05D002761 ORTHO05D003351 6.0e-15 84.7 150 42.0
Lj5A638G8 Lonicera japonica HOM05D002761 ORTHO05D003351 1.7e-14 83.2 147 38.1
Cc10_g11590 Coffea canephora HOM05D002761 ORTHO05D003351 3.9e-14 82.0 89 50.6
Lsat_1_v5_gn_6_104920 Lactuca sativa HOM05D002761 ORTHO05D003351 1.9e-13 79.7 150 37.3
MCO07G705 Micromonas commoda HOM05D002761 ORTHO05D003351 2.5e-13 79.3 68 55.9
Lsat_1_v5_gn_3_10980 Lactuca sativa HOM05D000331 ORTHO05D000732 3.3e-13 79.0 91 50.5
CARHR163300 Cardamine hirsuta HOM05D002761 ORTHO05D003351 2.1e-12 76.3 119 43.7
SMO351G0253 Selaginella moellendorffii HOM05D002761 ORTHO05D003351 1.1e-11 73.9 111 39.6
Rhsim06G0031300 Rhododendron simsii HOM05D002761 ORTHO05D003351 1.8e-11 73.2 138 34.8
Cfa023620 Carpinus fangiana HOM05D002761 ORTHO05D003351 2.4e-11 72.8 136 32.4
CBR_g3548 Chara braunii HOM05D000019 ORTHO05D000048 3.1e-11 72.4 165 32.7
Lj5A627G15 Lonicera japonica HOM05D002761 ORTHO05D003351 5.3e-11 71.6 63 58.7
Cre17.g726100 Chlamydomonas reinhardtii HOM05D002761 ORTHO05D003351 2.0e-10 69.7 69 50.7
Lj5A634G3 Lonicera japonica HOM05D002761 ORTHO05D003351 2.0e-10 69.7 114 38.6
BcaC05g24852 Brassica carinata HOM05D002761 ORTHO05D003351 1.3e-09 67.0 194 32.5
C05p08980 Brassica napus HOM05D002761 ORTHO05D003351 1.3e-09 67.0 194 32.5
Duzib177G0575 Durio zibethinus HOM05D002761 ORTHO05D003351 1.3e-09 67.0 138 37.0
SEGI_41053 Sequoiadendron giganteum HOM05D002761 ORTHO05D003351 8.4e-09 64.3 103 39.8
Lj5C622G3 Lonicera japonica HOM05D002761 ORTHO05D003351 3.2e-08 62.4 110 35.5
Cc10_g11600 Coffea canephora HOM05D002761 ORTHO05D003351 2.7e-07 59.3 48 66.7
AUR62022701 Chenopodium quinoa HOM05D002761 ORTHO05D003351 4.6e-07 58.5 78 42.3
Rhsim13G0146000 Rhododendron simsii HOM05D002761 ORTHO05D003351 1.3e-06 57.0 84 40.5
RhsimUnG0109800 Rhododendron simsii HOM05D002761 ORTHO05D003351 1.3e-06 57.0 84 40.5
AagrBONN_evm.TU.Sc2ySwM_117.3982 Anthoceros agrestis HOM05D002761 ORTHO05D003351 1.7e-06 56.6 105 39.0
MBI16_g07686_MAGBIO Magnolia biondii HOM05D002761 ORTHO05D003351 2.3e-06 56.2 45 64.4
MD05G1045700 Malus domestica HOM05D002761 ORTHO05D003351 2.3e-06 56.2 119 37.0


User provided reference genes

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