Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000876g0150 Nicotiana tabacum HOM05D008254 ORTHO05D010423 5.3e-142 507.7 255 100.0
Nitab4.5_0002673g0060 Nicotiana tabacum HOM05D008254 ORTHO05D010423 1.4e-97 360.1 205 89.3
PGSC0003DMG400008243 Solanum tuberosum HOM05D008254 ORTHO05D010423 1.2e-85 320.5 205 78.5
Sopen10g022350 Solanum pennellii HOM05D008254 ORTHO05D010423 2.2e-84 316.2 205 78.0
Solyc10g150128.1 Solanum lycopersicum HOM05D008254 ORTHO05D010423 2.3e-81 306.2 205 76.1
Actinidia00462 Actinidia chinensis HOM05D008254 ORTHO05D010423 9.8e-56 221.1 211 56.4
CSS0044006 Camellia sinensis var. sinensis HOM05D008254 ORTHO05D010423 1.6e-53 213.8 210 57.1
Oeu009760.1 Olea europaea HOM05D008254 ORTHO05D010423 2.7e-53 213.0 208 53.4
Duzib132G0754 Durio zibethinus HOM05D008254 ORTHO05D010423 3.5e-53 212.6 218 54.1
vmacro02178 Vaccinium macrocarpon HOM05D008254 ORTHO05D010423 1.3e-52 210.7 206 53.4
COL.COLO4_32691 Corchorus olitorius HOM05D008254 ORTHO05D010423 3.9e-52 209.1 207 55.6
TWI31G0737 Tripterygium wilfordii HOM05D008254 ORTHO05D010423 5.6e-51 205.3 207 54.6
QL11p037484 Quercus lobata HOM05D008254 ORTHO05D010423 7.3e-51 204.9 207 52.7
Cpa.g.sc62.40 Carica papaya HOM05D008254 ORTHO05D010423 2.3e-49 199.9 207 51.7
Cfa005450 Carpinus fangiana HOM05D008254 ORTHO05D010423 2.6e-48 196.4 214 52.3
GSVIVG01031792001 Vitis vinifera HOM05D008254 ORTHO05D010423 4.4e-48 195.7 207 50.2
Hund06184 Selenicereus undatus HOM05D008254 ORTHO05D010423 2.9e-47 193.0 212 50.5
Thecc.02G097100 Theobroma cacao HOM05D008254 ORTHO05D010423 4.9e-47 192.2 206 51.0
CiPaw.05G054200 Carya illinoinensis HOM05D008254 ORTHO05D010423 3.2e-46 189.5 209 51.2
SalBow6G2473 Salvia bowleyana HOM05D008254 ORTHO05D010423 4.1e-46 189.1 209 51.7
Potri.009G105900 Populus trichocarpa HOM05D008254 ORTHO05D010423 2.7e-45 186.4 209 48.8
Cc02_g18530 Coffea canephora HOM05D008254 ORTHO05D010423 7.8e-45 184.9 212 50.0
Oeu009762.1 Olea europaea HOM05D008254 ORTHO05D010423 1.3e-44 184.1 191 51.3
Gorai.005G240300 Gossypium raimondii HOM05D008254 ORTHO05D010423 2.3e-44 183.3 214 50.5
Gohir.D02G212300 Gossypium hirsutum HOM05D008254 ORTHO05D010423 5.1e-44 182.2 222 49.5
Sabra09G0080900 Salix brachista HOM05D008254 ORTHO05D010423 1.5e-43 180.6 208 46.6
Haze_01907 Corylus avellana HOM05D008254 ORTHO05D010423 1.9e-43 180.3 238 44.5
PGR042G1247 Punica granatum HOM05D008254 ORTHO05D010423 1.9e-43 180.3 209 51.2
Migut.B00312 Erythranthe guttata HOM05D008254 ORTHO05D010423 2.5e-43 179.9 207 46.4
Rhsim11G0168800 Rhododendron simsii HOM05D000144 ORTHO05D003364 4.3e-43 179.1 213 49.8
Lsat_1_v5_gn_9_110380 Lactuca sativa HOM05D008254 ORTHO05D010423 1.8e-41 173.7 206 46.1
MSTRG.20136 Avicennia marina HOM05D008254 ORTHO05D010423 3.1e-41 172.9 213 46.0
HanXRQChr02g0034931 Helianthus annuus HOM05D008254 ORTHO05D010423 2.0e-40 170.2 209 49.3
HanXRQChr02g0034971 Helianthus annuus HOM05D008254 ORTHO05D010423 2.0e-40 170.2 209 49.3
Os08g0477600 Oryza sativa ssp. japonica HOM05D008254 ORTHO05D010423 4.6e-37 159.1 234 44.0
SGA_v2.0_scaffold32G13109 Striga asiatica HOM05D008254 ORTHO05D010423 8.7e-36 154.8 246 41.5
PSO017G7184 Papaver somniferum HOM05D008254 ORTHO05D010423 1.1e-35 154.5 231 44.6
Eucgr.B00910 Eucalyptus grandis HOM05D008254 ORTHO05D010423 4.3e-35 152.5 127 63.8
PSO170G6160 Papaver somniferum HOM05D008254 ORTHO05D010423 2.1e-34 150.2 234 44.4
Aqoxy5G01299 Aquilegia oxysepala HOM05D008254 ORTHO05D010423 3.6e-34 149.4 253 40.3
ECA240G0616 Erigeron canadensis HOM05D008254 ORTHO05D010423 4.8e-34 149.1 209 44.5
Zm00001eb038300 Zea mays HOM05D008254 ORTHO05D010423 1.4e-33 147.5 237 41.8
HPP92_002305 Vanilla planifolia HOM05D008254 ORTHO05D010423 1.8e-33 147.1 218 39.4
MBI06_g07359_MAGBIO Magnolia biondii HOM05D008254 ORTHO05D010423 1.2e-32 144.4 195 44.1
Eucgr.G01497 Eucalyptus grandis HOM05D008254 ORTHO05D010423 2.4e-30 136.7 214 40.2
CANSAT25G2647 Cannabis sativa HOM05D008254 ORTHO05D010423 5.4e-30 135.6 232 39.7
Lj9A360G67 Lonicera japonica HOM05D008254 ORTHO05D010423 3.9e-28 129.4 207 42.5
Pp3c8_11550 Physcomitrium patens HOM05D008254 ORTHO05D010423 6.4e-23 112.1 246 35.0
Hma1.2p1_3161F.1_g333460 Hydrangea macrophylla HOM05D008254 ORTHO05D010423 1.2e-21 107.8 147 44.9
Nn1g05870 Nelumbo nucifera HOM05D008254 ORTHO05D010423 4.6e-21 105.9 180 41.7
SGA_v2.0_scaffold32G13097 Striga asiatica HOM05D008254 ORTHO05D010423 2.3e-20 103.6 252 30.6
DCAR_003621 Daucus carota HOM05D008254 ORTHO05D010423 5.6e-19 99.0 149 43.0
Gohir.A03G191400 Gossypium hirsutum HOM05D008254 ORTHO05D010423 1.3e-18 97.8 152 42.1
Manes.15G142800 Manihot esculenta HOM05D008254 ORTHO05D010423 1.3e-18 97.8 149 43.0
HanXRQChr02g0034911 Helianthus annuus HOM05D008254 ORTHO05D010423 4.8e-18 95.9 188 34.6
HanXRQChr12g0367771 Helianthus annuus HOM05D008254 ORTHO05D010423 3.1e-17 93.2 149 40.3
HanXRQChr03g0080261 Helianthus annuus HOM05D008254 ORTHO05D010423 1.2e-16 91.3 150 42.7
HanXRQChr08g0217421 Helianthus annuus HOM05D008254 ORTHO05D010423 1.2e-16 91.3 150 42.7
HanXRQChr08g0217441 Helianthus annuus HOM05D008254 ORTHO05D010423 1.2e-16 91.3 75 58.7
Nn3g20147 Nelumbo nucifera HOM05D008254 ORTHO05D010423 3.4e-16 89.7 70 61.4
Dinv23586 Davidia involucrata HOM05D008254 ORTHO05D010423 1.6e-10 70.9 184 33.7
QL11p037441 Quercus lobata HOM05D008254 ORTHO05D010423 9.3e-06 55.1 107 34.6


User provided reference genes

Program Settings