Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000872g0010 Nicotiana tabacum HOM05D005519 ORTHO05D006423 1.1e-74 283.5 167 100.0
Nitab4.5_0001103g0040 Nicotiana tabacum HOM05D005519 ORTHO05D006423 1.6e-67 259.6 170 88.2
Peaxi162Scf00160g01746 Petunia axillaris HOM05D005519 ORTHO05D006423 4.8e-59 231.5 171 82.5
CAN.G26.8 Capsicum annuum HOM05D005519 ORTHO05D006423 2.4e-58 229.2 172 83.1
Sopen04g027910 Solanum pennellii HOM05D005519 ORTHO05D006423 2.4e-55 219.2 173 79.2
PGSC0003DMG400018793 Solanum tuberosum HOM05D005519 ORTHO05D006423 5.5e-55 218.0 167 73.7
Solyc12g056620.2 Solanum lycopersicum HOM05D005519 ORTHO05D006423 2.1e-54 216.1 167 71.3
Sopen12g029280 Solanum pennellii HOM05D005519 ORTHO05D006423 3.5e-54 215.3 167 71.3
Solyc04g071930.4 Solanum lycopersicum HOM05D005519 ORTHO05D006423 6.0e-54 214.5 174 79.3
Cc10_g15180 Coffea canephora HOM05D005519 ORTHO05D006423 6.7e-53 211.1 190 72.1
PGSC0003DMG400025068 Solanum tuberosum HOM05D005519 ORTHO05D006423 3.3e-52 208.8 174 77.0
Peaxi162Scf00360g00028 Petunia axillaris HOM05D005519 ORTHO05D006423 5.6e-52 208.0 167 79.0
CAN.G495.8 Capsicum annuum HOM05D005519 ORTHO05D006423 9.6e-52 207.2 169 81.7
Nitab4.5_0002812g0030 Nicotiana tabacum HOM05D005519 ORTHO05D006423 2.1e-51 206.1 174 77.0
Hma1.2p1_0358F.1_g134710 Hydrangea macrophylla HOM05D005519 ORTHO05D006423 1.4e-50 203.4 183 68.9
Dinv25895 Davidia involucrata HOM05D005519 ORTHO05D006423 2.4e-50 202.6 179 76.0
MSTRG.25301 Avicennia marina HOM05D005519 ORTHO05D006423 6.9e-50 201.1 179 73.2
Lsat_1_v5_gn_9_42101 Lactuca sativa HOM05D005519 ORTHO05D006423 9.0e-50 200.7 169 74.6
Nitab4.5_0000099g0170 Nicotiana tabacum HOM05D005519 ORTHO05D006423 9.0e-50 200.7 172 76.2
Migut.C00964 Erythranthe guttata HOM05D005519 ORTHO05D006423 1.5e-49 199.9 167 73.7
DCAR_001160 Daucus carota HOM05D005519 ORTHO05D006423 1.0e-48 197.2 167 67.7
Glyma.20G169500 Glycine max HOM05D005519 ORTHO05D006423 2.2e-48 196.1 176 64.8
Phvul.004G091300 Phaseolus vulgaris HOM05D005519 ORTHO05D006423 2.9e-48 195.7 186 60.2
Glyma.10G222100 Glycine max HOM05D005519 ORTHO05D006423 1.9e-47 193.0 176 63.6
Glyma.16G163800 Glycine max HOM05D005519 ORTHO05D006423 2.7e-46 189.1 187 58.8
Lj7A382T71 Lonicera japonica HOM05D005519 ORTHO05D006423 2.7e-46 189.1 173 72.8
Lj2g0026694 Lotus japonicus HOM05D005519 ORTHO05D006423 3.5e-46 188.7 166 72.3
PGR042G3808 Punica granatum HOM05D005519 ORTHO05D006423 3.5e-46 188.7 188 68.6
Thecc.08G158600 Theobroma cacao HOM05D005519 ORTHO05D006423 3.5e-46 188.7 186 67.2
VMungo0720G0436 Vigna mungo HOM05D005519 ORTHO05D006423 3.5e-46 188.7 176 65.9
Ca_10667_v3 Cicer arietinum L. HOM05D005519 ORTHO05D006423 6.0e-46 188.0 178 61.2
Migut.N03201 Erythranthe guttata HOM05D005519 ORTHO05D006423 6.0e-46 188.0 169 74.6
Manes.02G182800 Manihot esculenta HOM05D005519 ORTHO05D006423 6.0e-46 188.0 190 68.4
CSS0002205 Camellia sinensis var. sinensis HOM05D005519 ORTHO05D006423 1.3e-45 186.8 182 70.9
CiPaw.15G012900 Carya illinoinensis HOM05D005519 ORTHO05D006423 1.3e-45 186.8 180 65.0
Duzib116G0927 Durio zibethinus HOM05D005519 ORTHO05D006423 1.3e-45 186.8 182 59.9
Glyma.02G079400 Glycine max HOM05D005519 ORTHO05D006423 1.3e-45 186.8 185 62.2
vmacro01488 Vaccinium macrocarpon HOM05D005519 ORTHO05D006423 1.3e-45 186.8 179 69.8
Potri.005G196100 Populus trichocarpa HOM05D005519 ORTHO05D006423 1.8e-45 186.4 191 67.0
TPR.G17016 Trifolium pratense HOM05D005519 ORTHO05D006423 2.3e-45 186.0 180 66.7
Cfa018287 Carpinus fangiana HOM05D005519 ORTHO05D006423 3.0e-45 185.7 154 70.8
Lsat_1_v5_gn_6_101660 Lactuca sativa HOM05D005519 ORTHO05D006423 3.0e-45 185.7 179 66.5
unitig_26.g9895 Utricularia gibba HOM05D005519 ORTHO05D006423 3.0e-45 185.7 167 68.3
VMungo0464G1678 Vigna mungo HOM05D005519 ORTHO05D006423 3.9e-45 185.3 188 68.6
Aa31LG6G8220 Aethionema arabicum HOM05D005519 ORTHO05D006423 5.1e-45 184.9 171 71.3
Gohir.D05G247500 Gossypium hirsutum HOM05D005519 ORTHO05D006423 5.1e-45 184.9 188 66.5
Gorai.009G258300 Gossypium raimondii HOM05D005519 ORTHO05D006423 8.7e-45 184.1 188 66.5
Potri.002G065000 Populus trichocarpa HOM05D005519 ORTHO05D006423 8.7e-45 184.1 191 64.4
Duzib093G1843 Durio zibethinus HOM05D005519 ORTHO05D006423 1.9e-44 183.0 185 67.0
TWI32G0061 Tripterygium wilfordii HOM05D005519 ORTHO05D006423 1.9e-44 183.0 178 60.1
TAR381G0167 Trochodendron aralioides HOM05D005519 ORTHO05D006423 2.5e-44 182.6 177 64.4
Psat6g190880 Pisum sativum HOM05D005519 ORTHO05D006423 3.3e-44 182.2 179 60.3
TWI34G0476 Tripterygium wilfordii HOM05D005519 ORTHO05D006423 3.3e-44 182.2 181 64.6
Gohir.A05G246000 Gossypium hirsutum HOM05D005519 ORTHO05D006423 4.3e-44 181.8 188 62.8
THA.LOC104806763 Tarenaya hassleriana HOM05D005519 ORTHO05D006423 4.3e-44 181.8 182 67.0
QL02p037831 Quercus lobata HOM05D005519 ORTHO05D006423 5.7e-44 181.4 191 60.7
Haze_17800 Corylus avellana HOM05D005519 ORTHO05D006423 7.4e-44 181.0 150 74.7
Lalb_Chr03g0035541 Lupinus albus HOM05D005519 ORTHO05D006423 9.7e-44 180.6 173 61.8
THA.LOC104825113 Tarenaya hassleriana HOM05D005519 ORTHO05D006423 9.7e-44 180.6 180 67.2
CiPaw.16G008800 Carya illinoinensis HOM05D005519 ORTHO05D006423 1.3e-43 180.3 187 62.6
Gohir.D02G068600 Gossypium hirsutum HOM05D005519 ORTHO05D006423 1.3e-43 180.3 174 66.7
Manes.18G094400 Manihot esculenta HOM05D005519 ORTHO05D006423 1.3e-43 180.3 191 64.4
MD05G1032800 Malus domestica HOM05D005519 ORTHO05D006423 1.6e-43 179.9 193 62.2
Phvul.007G083000 Phaseolus vulgaris HOM05D005519 ORTHO05D006423 1.6e-43 179.9 175 60.6
QL02p038173 Quercus lobata HOM05D005519 ORTHO05D006423 1.6e-43 179.9 195 62.1
Sabra02G0051900 Salix brachista HOM05D005519 ORTHO05D006423 1.6e-43 179.9 191 63.4
Lalb_Chr19g0130091 Lupinus albus HOM05D005519 ORTHO05D006423 2.2e-43 179.5 185 59.5
Rhsim11G0087200 Rhododendron simsii HOM05D005519 ORTHO05D006423 2.8e-43 179.1 185 65.9
Sabra05G0149500 Salix brachista HOM05D005519 ORTHO05D006423 2.8e-43 179.1 191 67.5
Sed0015682 Sechium edule HOM05D005519 ORTHO05D006423 2.8e-43 179.1 145 73.1
FvH4_2g13070 Fragaria vesca HOM05D005519 ORTHO05D006423 3.7e-43 178.7 188 63.3
Nn5g28816 Nelumbo nucifera HOM05D005519 ORTHO05D006423 3.7e-43 178.7 192 65.6
arahy.Tifrunner.gnm1.ann1.SKG6R6 Arachis hypogaea HOM05D005519 ORTHO05D006423 4.8e-43 178.3 192 60.4
ClCG08G008840 Citrullus lanatus HOM05D005519 ORTHO05D006423 4.8e-43 178.3 146 75.3
Gorai.005G077500 Gossypium raimondii HOM05D005519 ORTHO05D006423 4.8e-43 178.3 174 66.7
Atru.chr13.2018 Acer truncatum HOM05D005519 ORTHO05D006423 6.3e-43 177.9 185 67.0
arahy.Tifrunner.gnm1.ann1.8F5AL7 Arachis hypogaea HOM05D005519 ORTHO05D006423 8.2e-43 177.6 192 59.9
BcaB04g17909 Brassica carinata HOM05D005519 ORTHO05D006423 8.2e-43 177.6 171 67.8
BolC6t36346H Brassica oleracea HOM05D005519 ORTHO05D006423 8.2e-43 177.6 165 66.7
A08p08390 Brassica napus HOM05D005519 ORTHO05D006423 1.4e-42 176.8 171 67.8
BraA08t32855Z Brassica rapa HOM05D005519 ORTHO05D006423 1.4e-42 176.8 171 67.8
BcaC08g43825 Brassica carinata HOM05D005519 ORTHO05D006423 1.8e-42 176.4 165 66.1
Medtr1g098280 Medicago truncatula HOM05D005519 ORTHO05D006423 1.8e-42 176.4 178 62.9
RcHm_v2.0_Chr6g0274331 Rosa chinensis HOM05D005519 ORTHO05D006423 1.8e-42 176.4 188 61.7
BraA09t38789Z Brassica rapa HOM05D005519 ORTHO05D006423 5.3e-42 174.9 170 69.4
Lj5g0019555 Lotus japonicus HOM05D005519 ORTHO05D006423 5.3e-42 174.9 190 63.7
SGA_v2.0_scaffold108G30869 Striga asiatica HOM05D005519 ORTHO05D006423 6.9e-42 174.5 131 80.9
AT1G34000 Arabidopsis thaliana HOM05D005519 ORTHO05D006423 2.6e-41 172.6 176 67.0
Prupe.8G039900 Prunus persica HOM05D005519 ORTHO05D006423 4.5e-41 171.8 192 64.1
Ah.05g168160 Amaranthus hybridus HOM05D005519 ORTHO05D006423 7.6e-41 171.0 179 65.4
AL1G48440 Arabidopsis lyrata HOM05D005519 ORTHO05D006423 7.6e-41 171.0 178 65.7
HanXRQChr11g0320251 Helianthus annuus HOM05D005519 ORTHO05D006423 7.6e-41 171.0 173 69.4
MD10G1033800 Malus domestica HOM05D005519 ORTHO05D006423 7.6e-41 171.0 193 61.7
Cpa.g.sc49.79 Carica papaya HOM05D005519 ORTHO05D006423 1.3e-40 170.2 187 62.6
CsaV3_6G005050 Cucumis sativus L. HOM05D005519 ORTHO05D006423 1.3e-40 170.2 187 64.2
Sc26g0002910 Simmondsia chinensis HOM05D005519 ORTHO05D006423 1.3e-40 170.2 178 64.0
A09p32470 Brassica napus HOM05D005519 ORTHO05D006423 1.7e-40 169.9 170 67.6
BcaB07g33022 Brassica carinata HOM05D005519 ORTHO05D006423 2.9e-40 169.1 175 66.3
C06p12090 Brassica napus HOM05D005519 ORTHO05D006423 2.9e-40 169.1 172 68.6
Ciclev10002625m.g Citrus clementina HOM05D005519 ORTHO05D006423 2.9e-40 169.1 185 64.3
Lj4A703G50 Lonicera japonica HOM05D005519 ORTHO05D006423 3.8e-40 168.7 147 71.4
BolC8t47881H Brassica oleracea HOM05D005519 ORTHO05D006423 5.0e-40 168.3 172 65.1
CANSAT25G1666 Cannabis sativa HOM05D005519 ORTHO05D006423 6.5e-40 167.9 135 65.2
Thhalv10008704m.g Eutrema salsugineum HOM05D005519 ORTHO05D006423 8.5e-40 167.5 179 63.7
CARHR033380 Cardamine hirsuta HOM05D005519 ORTHO05D006423 1.1e-39 167.2 180 64.4
MSTRG.1105 Avicennia marina HOM05D000084 ORTHO05D006423 1.9e-39 166.4 155 70.3
FAN24G1125 Fragaria x ananassa HOM05D003947 ORTHO05D004614 1.9e-39 166.4 136 72.1
FAN15G1092 Fragaria x ananassa HOM05D003947 ORTHO05D004614 2.5e-39 166.0 136 75.7
Carub.0001s3208 Capsella rubella HOM05D005519 ORTHO05D006423 4.2e-39 165.2 179 64.2
FAN27G0467 Fragaria x ananassa HOM05D005519 ORTHO05D006423 1.2e-38 163.7 174 63.8
PSO541G5828 Papaver somniferum HOM05D005519 ORTHO05D006423 3.0e-37 159.1 190 52.6
PSO675G0400 Papaver somniferum HOM05D005519 ORTHO05D006423 3.9e-37 158.7 191 58.1
HPP92_000679 Vanilla planifolia HOM05D005519 ORTHO05D006423 5.1e-37 158.3 174 53.4
MBI04_g08940_MAGBIO Magnolia biondii HOM05D005519 ORTHO05D006423 1.9e-36 156.4 141 74.5
GSVIVG01034578001 Vitis vinifera HOM05D005519 ORTHO05D006423 2.5e-36 156.0 85 88.2
ECA246G0665 Erigeron canadensis HOM05D003947 ORTHO05D006423 3.3e-36 155.6 132 67.4
Nn1g06007 Nelumbo nucifera HOM05D005519 ORTHO05D006423 5.7e-36 154.8 174 66.7
CDE04G2354 Ceratophyllum demersum HOM05D005519 ORTHO05D006423 4.8e-35 151.8 176 55.7
Sp1g29260 Schrenkiella parvula HOM05D005519 ORTHO05D006423 8.2e-35 151.0 215 54.4
ATR0580G316 Amborella trichopoda HOM05D005519 ORTHO05D006423 5.3e-34 148.3 177 61.0
AUR62026639 Chenopodium quinoa HOM05D003947 ORTHO05D004614 5.3e-34 148.3 87 82.8
Sed0018725 Sechium edule HOM05D005519 ORTHO05D006423 9.1e-34 147.5 128 61.7
Zm00001eb160790 Zea mays HOM05D005519 ORTHO05D006423 7.7e-33 144.4 159 52.8
Zm00001eb357520 Zea mays HOM05D005519 ORTHO05D006423 6.5e-32 141.4 155 61.3
Oeu051280.1 Olea europaea HOM05D005519 ORTHO05D006423 8.8e-29 131.0 146 67.1
Os01g0589800 Oryza sativa ssp. japonica HOM05D005519 ORTHO05D006423 2.6e-28 129.4 69 88.4
AUR62034898 Chenopodium quinoa HOM05D005519 ORTHO05D006423 4.4e-28 128.6 75 82.7
COL.COLO4_03361 Corchorus olitorius HOM05D005519 ORTHO05D006423 3.7e-27 125.6 69 81.2
Dinv41044 Davidia involucrata HOM05D005519 ORTHO05D006423 4.8e-27 125.2 142 68.3
AagrBONN_evm.TU.Sc2ySwM_117.629 Anthoceros agrestis HOM05D005519 ORTHO05D006423 1.0e-24 117.5 145 58.6
Actinidia17771 Actinidia chinensis HOM05D005519 ORTHO05D006423 1.3e-24 117.1 105 62.9
Mapoly0065s0010 Marchantia polymorpha HOM05D005519 ORTHO05D006423 3.6e-22 109.0 82 63.4
A05p24090 Brassica napus HOM05D011378 ORTHO05D006423 1.0e-21 107.5 106 59.4
BraA05t21288Z Brassica rapa HOM05D003947 ORTHO05D006423 5.2e-21 105.1 68 79.4
SMO139G0065 Selaginella moellendorffii HOM05D005519 ORTHO05D006423 2.6e-20 102.8 178 48.3
CSS0025090 Camellia sinensis var. sinensis HOM05D005519 ORTHO05D006423 8.2e-19 97.8 129 62.8
MELO3C029825.2 Cucumis melo HOM05D005519 ORTHO05D006423 1.8e-18 96.7 113 65.5
CBR_g32244 Chara braunii HOM05D005519 ORTHO05D006423 2.4e-18 96.3 80 57.5
Cre06.g251150 Chlamydomonas reinhardtii HOM05D005519 ORTHO05D006423 1.6e-17 93.6 82 56.1
MCO05G699 Micromonas commoda HOM05D005519 ORTHO05D006423 1.7e-16 90.1 80 51.2
Hund30143 Selenicereus undatus HOM05D005519 ORTHO05D006423 2.2e-16 89.7 171 49.1
Eucgr.L00901 Eucalyptus grandis HOM05D005519 ORTHO05D006423 1.9e-15 86.7 133 57.9
PRCOL_00003386 Prasinoderma coloniale HOM05D005519 ORTHO05D006423 2.7e-09 66.2 67 49.3
Pp3c1_8300 Physcomitrium patens HOM05D005519 ORTHO05D006423 1.9e-07 60.1 39 64.1
unitig_749.g13910 Utricularia gibba HOM05D005519 ORTHO05D006423 3.6e-06 55.8 114 41.2


User provided reference genes

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