Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000869g0080 Nicotiana tabacum HOM05D007839 ORTHO05D009924 3.7e-129 464.9 239 100.0
Nitab4.5_0009201g0030 Nicotiana tabacum HOM05D007839 ORTHO05D009924 2.8e-81 305.8 177 89.3
Peaxi162Scf00008g02916 Petunia axillaris HOM05D007839 ORTHO05D009924 6.4e-65 251.5 213 66.2
Sopen02g019500 Solanum pennellii HOM05D007839 ORTHO05D009924 3.9e-46 189.1 198 53.5
CSS0048482 Camellia sinensis var. sinensis HOM05D007839 ORTHO05D009924 4.9e-41 172.2 222 45.9
TWI73G0350 Tripterygium wilfordii HOM05D007839 ORTHO05D009924 1.2e-39 167.5 214 46.3
Atru.chr10.1228 Acer truncatum HOM05D007839 ORTHO05D009924 7.8e-39 164.9 206 46.1
TWI73G0663 Tripterygium wilfordii HOM05D007839 ORTHO05D009924 3.3e-37 159.5 200 46.5
Sabra04G0043100 Salix brachista HOM05D007839 ORTHO05D009924 5.6e-37 158.7 207 44.9
CiPaw.09G123500 Carya illinoinensis HOM05D007839 ORTHO05D009924 4.8e-36 155.6 208 45.2
Ciclev10017838m.g Citrus clementina HOM05D007839 ORTHO05D009924 4.8e-36 155.6 197 46.2
Manes.17G069900 Manihot esculenta HOM05D007839 ORTHO05D009924 1.8e-35 153.7 213 45.1
Potri.004G064800 Populus trichocarpa HOM05D007839 ORTHO05D009924 4.0e-35 152.5 213 44.6
MD05G1283900 Malus domestica HOM05D007839 ORTHO05D009924 9.0e-35 151.4 202 44.1
MD10G1262200 Malus domestica HOM05D007839 ORTHO05D009924 1.2e-34 151.0 203 42.9
Haze_05595 Corylus avellana HOM05D007839 ORTHO05D009924 2.6e-34 149.8 201 44.3
QL05p058196 Quercus lobata HOM05D007839 ORTHO05D009924 3.4e-34 149.4 201 42.8
Sabra11G0067200 Salix brachista HOM05D007839 ORTHO05D009924 3.4e-34 149.4 252 39.3
Prupe.4G080500 Prunus persica HOM05D007839 ORTHO05D009924 5.8e-34 148.7 203 42.9
TWI09G0569 Tripterygium wilfordii HOM05D007839 ORTHO05D009924 7.6e-34 148.3 208 42.8
QL05p058124 Quercus lobata HOM05D007839 ORTHO05D009924 3.8e-33 146.0 202 42.1
Cfa000944 Carpinus fangiana HOM05D007839 ORTHO05D009924 1.9e-32 143.7 214 45.3
CANSAT35G0562 Cannabis sativa HOM05D007839 ORTHO05D009924 2.7e-31 139.8 213 40.4
FvH4_3g05560 Fragaria vesca HOM05D007839 ORTHO05D009924 1.3e-30 137.5 203 43.3
FAN25G1788 Fragaria x ananassa HOM05D007839 ORTHO05D009924 1.3e-30 137.5 203 43.3
PGSC0003DMG400021096 Solanum tuberosum HOM05D007839 ORTHO05D009924 5.1e-30 135.6 126 58.7
RcHm_v2.0_Chr5g0014141 Rosa chinensis HOM05D007839 ORTHO05D009924 2.5e-29 133.3 202 41.6
BcaC02g11515 Brassica carinata HOM05D007839 ORTHO05D009924 3.3e-29 132.9 242 36.0
ClCG01G024620 Citrullus lanatus HOM05D007839 ORTHO05D009924 9.6e-29 131.3 204 38.2
GSVIVG01021451001 Vitis vinifera HOM05D007839 ORTHO05D009924 2.8e-28 129.8 192 40.1
MBI07_g43266_MAGBIO Magnolia biondii HOM05D007839 ORTHO05D009924 4.8e-28 129.0 219 37.0
BcaB02g09533 Brassica carinata HOM05D007839 ORTHO05D009924 6.2e-28 128.6 230 36.1
FAN16G2540 Fragaria x ananassa HOM05D000499 ORTHO05D006980 2.4e-27 126.7 189 42.3
CsaV3_6G051740 Cucumis sativus L. HOM05D007839 ORTHO05D009924 4.0e-27 125.9 206 37.4
THA.LOC104814297 Tarenaya hassleriana HOM05D007839 ORTHO05D009924 4.0e-27 125.9 249 32.1
AT2G34530 Arabidopsis thaliana HOM05D007839 ORTHO05D009924 5.3e-27 125.6 207 37.7
Cpa.g.sc166.6 Carica papaya HOM05D007839 ORTHO05D009924 5.3e-27 125.6 206 38.3
Aa31LG10G6870 Aethionema arabicum HOM05D007839 ORTHO05D009924 6.9e-27 125.2 234 35.0
AL4G30500 Arabidopsis lyrata HOM05D007839 ORTHO05D009924 9.0e-27 124.8 207 37.7
FAN11G2724 Fragaria x ananassa HOM05D000499 ORTHO05D006980 1.5e-26 124.0 188 42.0
GSVIVG01021458001 Vitis vinifera HOM05D007839 ORTHO05D009924 2.6e-26 123.2 123 56.1
MELO3C007133.2 Cucumis melo HOM05D007839 ORTHO05D009924 3.4e-26 122.9 200 39.5
BolC4t23033H Brassica oleracea HOM05D007839 ORTHO05D009924 4.5e-26 122.5 242 34.7
Gohir.D06G142600 Gossypium hirsutum HOM05D007839 ORTHO05D009924 5.8e-26 122.1 174 44.8
BraA05t20061Z Brassica rapa HOM05D007839 ORTHO05D009924 1.7e-25 120.6 242 35.5
Sed0023114 Sechium edule HOM05D007839 ORTHO05D009924 1.7e-25 120.6 202 37.1
Gorai.010G166400 Gossypium raimondii HOM05D007839 ORTHO05D009924 2.2e-25 120.2 174 44.3
Sp4g16790 Schrenkiella parvula HOM05D007839 ORTHO05D009924 2.2e-25 120.2 211 35.5
Gohir.A06G137400 Gossypium hirsutum HOM05D007839 ORTHO05D009924 2.9e-25 119.8 174 44.3
Duzib235G0881 Durio zibethinus HOM05D007839 ORTHO05D009924 3.8e-25 119.4 172 43.6
CARHR128620 Cardamine hirsuta HOM05D007839 ORTHO05D009924 8.4e-25 118.2 234 35.0
C04p14500 Brassica napus HOM05D007839 ORTHO05D009924 4.2e-24 115.9 173 41.6
CiPaw.09G123700 Carya illinoinensis HOM05D007839 ORTHO05D009924 9.3e-24 114.8 137 44.5
C04p63860 Brassica napus HOM05D007839 ORTHO05D009924 6.0e-23 112.1 211 36.5
BraA04t18149Z Brassica rapa HOM05D007839 ORTHO05D009924 6.0e-23 112.1 211 36.5
HPP92_020033 Vanilla planifolia HOM05D007839 ORTHO05D009924 1.3e-22 110.9 219 37.4
A05p11150 Brassica napus HOM05D007839 ORTHO05D009924 1.8e-22 110.5 173 40.5
RcHm_v2.0_Chr5g0014111 Rosa chinensis HOM05D007839 ORTHO05D009924 5.1e-22 109.0 149 45.0
BcaB06g28780 Brassica carinata HOM05D007839 ORTHO05D009924 3.3e-21 106.3 205 35.1
BolC4t27853H Brassica oleracea HOM05D007839 ORTHO05D009924 3.3e-21 106.3 145 44.1
COL.COLO4_31073 Corchorus olitorius HOM05D007839 ORTHO05D009924 3.3e-21 106.3 221 33.9
arahy.Tifrunner.gnm1.ann1.EDFF2E Arachis hypogaea HOM05D007839 ORTHO05D009924 7.4e-21 105.1 129 47.3
Thecc.06G150800 Theobroma cacao HOM05D007839 ORTHO05D009924 7.4e-21 105.1 219 36.1
MBI07_g37165_MAGBIO Magnolia biondii HOM05D007839 ORTHO05D009924 5.3e-19 99.0 135 43.0
Medtr2g019410 Medicago truncatula HOM05D007839 ORTHO05D009924 5.3e-19 99.0 156 40.4
TPR.G11372 Trifolium pratense HOM05D007839 ORTHO05D009924 1.5e-18 97.4 130 46.9
Phvul.006G164900 Phaseolus vulgaris HOM05D007839 ORTHO05D009924 3.8e-17 92.8 172 38.4
CANSAT35G0336 Cannabis sativa HOM05D007839 ORTHO05D009924 9.3e-16 88.2 214 32.2
Thhalv10017730m.g Eutrema salsugineum HOM05D007839 ORTHO05D009924 2.1e-15 87.0 160 38.1
ATR1091G096 Amborella trichopoda HOM05D000884 ORTHO05D002127 6.0e-15 85.5 142 40.1
Gorai.010G238500 Gossypium raimondii HOM05D007839 ORTHO05D009924 7.9e-15 85.1 222 32.4
Glyma.15G094000 Glycine max HOM05D007839 ORTHO05D009924 1.0e-14 84.7 110 48.2
A04p26450 Brassica napus HOM05D007839 ORTHO05D009924 5.1e-14 82.4 133 39.1
Carub.0004s1620 Capsella rubella HOM05D007839 ORTHO05D009924 1.3e-12 77.8 106 43.4
MBI07_g35861_MAGBIO Magnolia biondii HOM05D007839 ORTHO05D009924 6.3e-12 75.5 102 40.2
Haze_05600 Corylus avellana HOM05D007839 ORTHO05D009924 1.5e-10 70.9 294 26.9
BcaC02g11516 Brassica carinata HOM05D008587 ORTHO05D010485 5.0e-09 65.9 119 37.8
C04p14490 Brassica napus HOM05D008587 ORTHO05D010485 5.0e-09 65.9 119 37.8
BolC4t23032H Brassica oleracea HOM05D008587 ORTHO05D010485 5.0e-09 65.9 119 37.8
BcaB02g09532 Brassica carinata HOM05D008587 ORTHO05D010485 6.5e-09 65.5 119 37.8
A05p11130 Brassica napus HOM05D008587 ORTHO05D010485 1.1e-08 64.7 90 45.6
BraA05t20060Z Brassica rapa HOM05D008587 ORTHO05D010485 1.1e-08 64.7 90 45.6
ATR1091G017 Amborella trichopoda HOM05D007839 ORTHO05D009924 1.4e-08 64.3 244 28.7
Sabra04G0043200 Salix brachista HOM05D008587 ORTHO05D010485 1.9e-08 63.9 104 38.5
ATR1091G011 Amborella trichopoda HOM05D007839 ORTHO05D009924 7.2e-08 62.0 142 33.1
Ciclev10016244m.g Citrus clementina HOM05D008587 ORTHO05D010485 1.2e-07 61.2 89 46.1
arahy.Tifrunner.gnm1.ann1.9V8GBM Arachis hypogaea HOM05D007839 ORTHO05D009924 2.7e-07 60.1 93 40.9
CANSAT35G1906 Cannabis sativa HOM05D007839 ORTHO05D009924 2.7e-07 60.1 199 27.1
Potri.004G064900 Populus trichocarpa HOM05D008587 ORTHO05D010485 3.6e-07 59.7 103 39.8
Cfa000946 Carpinus fangiana HOM05D008587 ORTHO05D010485 7.9e-07 58.5 103 39.8
AL4G30510 Arabidopsis lyrata HOM05D008587 ORTHO05D010485 1.0e-06 58.2 90 43.3
Thhalv10017034m.g Eutrema salsugineum HOM05D008587 ORTHO05D010485 1.4e-06 57.8 108 37.0
Manes.17G070000 Manihot esculenta HOM05D008587 ORTHO05D010485 1.4e-06 57.8 94 42.6
Sp4g16800 Schrenkiella parvula HOM05D008587 ORTHO05D010485 1.4e-06 57.8 90 43.3
THA.LOC104814298 Tarenaya hassleriana HOM05D008587 ORTHO05D010485 1.8e-06 57.4 91 40.7
Aa31LG10G6860 Aethionema arabicum HOM05D008587 ORTHO05D010485 2.3e-06 57.0 129 33.3
AT2G34540 Arabidopsis thaliana HOM05D008587 ORTHO05D010485 2.3e-06 57.0 90 42.2
Carub.0004s1621 Capsella rubella HOM05D008587 ORTHO05D010485 2.3e-06 57.0 119 34.5
Prupe.4G080600 Prunus persica HOM05D008587 ORTHO05D010485 6.7e-06 55.5 97 39.2


User provided reference genes

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