Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000867g0050 Nicotiana tabacum HOM05D005697 ORTHO05D006951 6.8e-65 250.8 150 100.0
Nitab4.5_0000451g0070 Nicotiana tabacum HOM05D005697 ORTHO05D006951 2.8e-58 228.8 150 80.7
Sopen09g034040 Solanum pennellii HOM05D005697 ORTHO05D006951 5.6e-35 151.4 136 74.3
Solyc09g091060.3 Solanum lycopersicum HOM05D005697 ORTHO05D006951 2.8e-34 149.1 136 67.6
PGSC0003DMG400011585 Solanum tuberosum HOM05D005697 ORTHO05D006951 6.2e-34 147.9 136 76.5
CAN.G812.40 Capsicum annuum HOM05D005697 ORTHO05D006951 6.9e-33 144.4 136 73.5
Peaxi162Scf01007g00013 Petunia axillaris HOM05D005697 ORTHO05D006951 3.4e-32 142.1 136 61.0
Peaxi162Scf00125g01016 Petunia axillaris HOM05D005697 ORTHO05D006951 3.2e-30 135.6 137 72.3
Nitab4.5_0002738g0060 Nicotiana tabacum HOM05D005697 ORTHO05D006951 3.9e-28 128.6 137 57.7
Nitab4.5_0001998g0050 Nicotiana tabacum HOM05D005697 ORTHO05D006951 3.1e-25 119.0 136 59.6
Cc03_g06970 Coffea canephora HOM05D005697 ORTHO05D006951 6.9e-25 117.9 136 46.3
Solyc12g097060.1 Solanum lycopersicum HOM05D005697 ORTHO05D006951 1.2e-24 117.1 137 53.3
PGSC0003DMG400008629 Solanum tuberosum HOM05D005697 ORTHO05D006951 3.8e-23 112.1 137 51.1
Dinv27139 Davidia involucrata HOM05D005697 ORTHO05D006951 2.5e-19 99.4 136 50.7
Oeu008818.1 Olea europaea HOM05D005697 ORTHO05D006951 4.3e-19 98.6 137 43.8
CiPaw.01G174800 Carya illinoinensis HOM05D005697 ORTHO05D006951 9.0e-17 90.9 136 41.2
QL06p022167 Quercus lobata HOM05D005697 ORTHO05D006951 2.0e-16 89.7 136 39.0
TAR365G1050 Trochodendron aralioides HOM05D005697 ORTHO05D006951 2.6e-16 89.4 146 42.5
Thecc.04G218700 Theobroma cacao HOM05D005697 ORTHO05D006951 3.4e-16 89.0 138 39.9
Duzib151G0493 Durio zibethinus HOM05D005697 ORTHO05D006951 2.2e-15 86.3 138 38.4
Lj6g0023034 Lotus japonicus HOM05D005697 ORTHO05D006951 3.2e-14 82.4 136 39.7
COL.COLO4_07143 Corchorus olitorius HOM05D005697 ORTHO05D006951 5.5e-14 81.6 139 48.2
Oeu007537.1 Olea europaea HOM05D005697 ORTHO05D006951 2.1e-13 79.7 66 59.1
Medtr1g046070 Medicago truncatula HOM05D005697 ORTHO05D006951 2.7e-13 79.3 129 50.4
MSTRG.21934 Avicennia marina HOM05D005697 ORTHO05D006951 3.6e-13 79.0 68 60.3
VMungo0720G1671 Vigna mungo HOM05D005697 ORTHO05D006951 3.6e-13 79.0 137 35.8
SalBow3G1865 Salvia bowleyana HOM05D005697 ORTHO05D006951 6.1e-13 78.2 68 55.9
SalBow3G3550 Salvia bowleyana HOM05D005697 ORTHO05D006951 6.1e-13 78.2 68 55.9
Phvul.007G233100 Phaseolus vulgaris HOM05D005697 ORTHO05D006951 7.9e-13 77.8 123 36.6
arahy.Tifrunner.gnm1.ann1.BKX7X4 Arachis hypogaea HOM05D005697 ORTHO05D006951 1.0e-12 77.4 122 36.9
TPR.G23989 Trifolium pratense HOM05D005697 ORTHO05D006951 1.4e-12 77.0 122 35.2
Glyma.20G081000 Glycine max HOM05D005697 ORTHO05D006951 2.3e-12 76.3 123 35.8
Nn1g03052 Nelumbo nucifera HOM05D005697 ORTHO05D006951 2.3e-12 76.3 121 38.8
Glyma.10G130200 Glycine max HOM05D005697 ORTHO05D006951 5.1e-12 75.1 137 33.6
Prupe.1G054100 Prunus persica HOM05D005697 ORTHO05D006951 5.1e-12 75.1 142 36.6
CiPaw.02G104000 Carya illinoinensis HOM05D005697 ORTHO05D006951 8.8e-12 74.3 137 37.2
MD13G1226700 Malus domestica HOM05D005697 ORTHO05D006951 1.5e-11 73.6 152 32.9
Nn3g19835 Nelumbo nucifera HOM05D005697 ORTHO05D006951 1.9e-11 73.2 113 47.8
Sabra10G0044100 Salix brachista HOM05D005697 ORTHO05D006951 1.9e-11 73.2 137 36.5
Atru.chr4.1856 Acer truncatum HOM05D005697 ORTHO05D006951 2.5e-11 72.8 168 33.3
Cpa.g.sc59.48 Carica papaya HOM05D005697 ORTHO05D006951 2.5e-11 72.8 130 39.2
Duzib212G0179 Durio zibethinus HOM05D005697 ORTHO05D006951 7.4e-11 71.2 138 41.3
arahy.Tifrunner.gnm1.ann1.1SMG72 Arachis hypogaea HOM05D005697 ORTHO05D006951 1.3e-10 70.5 124 35.5
Lalb_Chr03g0036851 Lupinus albus HOM05D005697 ORTHO05D006951 1.7e-10 70.1 136 42.6
RcHm_v2.0_Chr4g0396171 Rosa chinensis HOM05D005697 ORTHO05D006951 2.2e-10 69.7 146 32.2
SGA_v2.0_scaffold31G12607 Striga asiatica HOM05D005697 ORTHO05D006951 2.2e-10 69.7 69 52.2
TAR362G0923 Trochodendron aralioides HOM05D005697 ORTHO05D006951 2.2e-10 69.7 140 35.0
MSTRG.24645 Avicennia marina HOM05D005697 ORTHO05D006951 2.8e-10 69.3 144 35.4
Sabra08G0132900 Salix brachista HOM05D005697 ORTHO05D006951 2.8e-10 69.3 139 34.5
Manes.03G155600 Manihot esculenta HOM05D005697 ORTHO05D006951 4.8e-10 68.6 132 44.7
Potri.010G062600 Populus trichocarpa HOM05D005697 ORTHO05D006951 1.1e-09 67.4 138 36.2
CSS0038279 Camellia sinensis var. sinensis HOM05D005697 ORTHO05D006951 1.4e-09 67.0 71 49.3
FAN07G2767 Fragaria x ananassa HOM05D005697 ORTHO05D006951 1.4e-09 67.0 147 32.7
DCAR_024305 Daucus carota HOM05D005697 ORTHO05D006951 1.8e-09 66.6 138 34.1
FvH4_4g05260 Fragaria vesca HOM05D005697 ORTHO05D006951 1.8e-09 66.6 147 32.7
FAN22G1047 Fragaria x ananassa HOM05D005697 ORTHO05D006951 1.8e-09 66.6 147 32.7
Ah.13g075010 Amaranthus hybridus HOM05D005697 ORTHO05D006951 2.4e-09 66.2 126 36.5
MBI07_g15425_MAGBIO Magnolia biondii HOM05D005697 ORTHO05D006951 2.4e-09 66.2 140 35.0
FAN12G1366 Fragaria x ananassa HOM05D005697 ORTHO05D006951 6.9e-09 64.7 147 32.0
FAN17G2424 Fragaria x ananassa HOM05D005697 ORTHO05D006951 9.1e-09 64.3 147 32.0
Cfa014837 Carpinus fangiana HOM05D005697 ORTHO05D006951 2.0e-08 63.2 112 42.0
Haze_11516 Corylus avellana HOM05D005697 ORTHO05D006951 2.6e-08 62.8 113 38.9
Haze_11522 Corylus avellana HOM05D005697 ORTHO05D006951 2.6e-08 62.8 113 38.9
Sed0013611 Sechium edule HOM05D005697 ORTHO05D006951 2.6e-08 62.8 138 34.1
TWI53G2060 Tripterygium wilfordii HOM05D005697 ORTHO05D006951 2.6e-08 62.8 137 33.6
CsaV3_1G001240 Cucumis sativus L. HOM05D005697 ORTHO05D006951 3.4e-08 62.4 137 32.8
Actinidia39942 Actinidia chinensis HOM05D005697 ORTHO05D006951 5.9e-08 61.6 137 35.0
Hund24861 Selenicereus undatus HOM05D005697 ORTHO05D006951 5.9e-08 61.6 123 39.0
Migut.N00325 Erythranthe guttata HOM05D005697 ORTHO05D006951 7.7e-08 61.2 76 47.4
Lsat_1_v5_gn_6_67840 Lactuca sativa HOM05D005697 ORTHO05D006951 7.7e-08 61.2 160 31.9
Gohir.A09G201000 Gossypium hirsutum HOM05D005697 ORTHO05D006951 1.0e-07 60.8 94 40.4
Gorai.006G218600 Gossypium raimondii HOM05D005697 ORTHO05D006951 1.0e-07 60.8 94 40.4
Sed0003887 Sechium edule HOM05D005697 ORTHO05D006951 1.3e-07 60.5 137 32.8
TWI09G0842 Tripterygium wilfordii HOM05D005697 ORTHO05D006951 1.3e-07 60.5 143 32.9
AUR62035897 Chenopodium quinoa HOM05D005697 ORTHO05D006951 2.2e-07 59.7 127 33.1
Manes.15G047800 Manihot esculenta HOM05D005697 ORTHO05D006951 2.9e-07 59.3 130 33.8
Gohir.D09G195200 Gossypium hirsutum HOM05D005697 ORTHO05D006951 5.0e-07 58.5 94 40.4
MELO3C026270.2 Cucumis melo HOM05D005697 ORTHO05D006951 6.5e-07 58.2 137 38.7
vmacro15494 Vaccinium macrocarpon HOM05D005697 ORTHO05D006951 1.1e-06 57.4 140 30.7
CDE05G2497 Ceratophyllum demersum HOM05D005697 ORTHO05D006951 1.4e-06 57.0 130 43.1
ClCG06G017260 Citrullus lanatus HOM05D005697 ORTHO05D006951 1.4e-06 57.0 144 31.9
Eucgr.H02876 Eucalyptus grandis HOM05D005697 ORTHO05D006951 1.4e-06 57.0 119 34.5
AUR62035343 Chenopodium quinoa HOM05D005697 ORTHO05D006951 3.2e-06 55.8 118 33.9
Rhsim02G0049300 Rhododendron simsii HOM05D005697 ORTHO05D006951 3.2e-06 55.8 121 33.1
unitig_26.g9545 Utricularia gibba HOM05D005697 ORTHO05D006951 5.5e-06 55.1 66 42.4
EL10Ac3g06730 Beta vulgaris HOM05D005697 ORTHO05D006951 9.4e-06 54.3 118 38.1


User provided reference genes

Program Settings