Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000865g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.5e-59 230.7 133 100.0
Nitab4.5_0001361g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.4e-39 164.9 130 69.2
Nitab4.5_0000050g0250 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.3e-38 163.3 127 70.1
Nitab4.5_0000378g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.0e-37 157.5 130 66.2
Nitab4.5_0000663g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.6e-36 156.4 130 64.6
Nitab4.5_0001204g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.5e-36 155.2 130 66.2
Nitab4.5_0012205g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.1e-34 150.2 130 62.3
Nitab4.5_0000043g0350 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.2e-34 148.7 130 63.1
Nitab4.5_0000517g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.2e-34 148.3 130 64.6
Nitab4.5_0013726g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.5e-34 147.9 130 63.8
Nitab4.5_0002897g0060 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.2e-33 146.7 125 65.6
Nitab4.5_0004708g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.1e-33 146.0 129 63.6
Nitab4.5_0000702g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.7e-33 145.6 130 63.8
Nitab4.5_0000513g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.4e-32 143.3 131 62.6
Nitab4.5_0001859g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.2e-32 141.4 129 62.8
Nitab4.5_0000702g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.8e-32 140.6 130 63.1
Nitab4.5_0006161g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.8e-32 140.6 130 63.8
Nitab4.5_0001502g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.2e-31 140.2 131 61.8
Nitab4.5_0002999g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.5e-31 139.8 130 59.2
Nitab4.5_0007746g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.0e-31 139.4 130 62.3
Nitab4.5_0000989g0060 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.5e-31 137.5 130 60.8
Nitab4.5_0000142g0450 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.8e-30 134.8 130 59.2
Nitab4.5_0001106g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.8e-30 134.8 130 60.0
Nitab4.5_0000491g0150 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.1e-29 132.1 130 60.0
Nitab4.5_0000919g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.1e-29 131.7 130 58.5
Nitab4.5_0000051g0150 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.3e-29 131.3 105 69.5
Nitab4.5_0001772g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.3e-29 131.3 130 63.1
CAN.G126.50 Capsicum annuum HOM05D003911 ORTHO05D002175 1.2e-28 130.2 126 54.0
Nitab4.5_0001800g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.0e-28 129.4 131 59.5
Nitab4.5_0000347g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.7e-28 129.0 134 57.5
Nitab4.5_0013863g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.5e-28 128.6 129 63.6
Nitab4.5_0001168g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.7e-28 127.5 130 61.5
Nitab4.5_0009406g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.3e-27 126.7 130 56.9
Nitab4.5_0001953g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.7e-27 126.3 130 60.0
Nitab4.5_0000101g0410 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.1e-26 123.6 117 60.7
Nitab4.5_0000056g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.5e-26 122.5 116 62.1
Nitab4.5_0002735g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.4e-26 120.6 130 59.2
Nitab4.5_0002700g0210 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.1e-25 119.4 99 65.7
Nitab4.5_0000005g0430 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.6e-25 118.6 130 59.2
Nitab4.5_0008324g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.6e-25 118.6 130 56.2
Nitab4.5_0000304g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.7e-25 118.2 127 59.1
Nitab4.5_0007170g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.7e-25 118.2 94 70.2
Nitab4.5_0000319g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.8e-24 114.0 130 57.7
Nitab4.5_0004620g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.2e-23 113.6 127 55.1
CAN.G383.4 Capsicum annuum HOM05D003911 ORTHO05D002175 2.0e-23 112.8 119 50.4
CAN.G47.7 Capsicum annuum HOM05D003911 ORTHO05D002175 2.6e-23 112.5 119 50.4
CAN.G602.4 Capsicum annuum HOM05D003911 ORTHO05D002175 3.4e-23 112.1 130 48.5
Nitab4.5_0000043g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.3e-22 110.2 90 68.9
Solyc10g038140.1 Solanum lycopersicum HOM05D003911 ORTHO05D002175 2.2e-22 109.4 114 52.6
Nitab4.5_0000205g0130 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.3e-22 107.8 97 59.8
CAN.G138.18 Capsicum annuum HOM05D003911 ORTHO05D002175 8.3e-22 107.5 130 46.2
CAN.G146.8 Capsicum annuum HOM05D003911 ORTHO05D002175 8.3e-22 107.5 127 46.5
Nitab4.5_0022442g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.1e-21 107.1 130 51.5
Nitab4.5_0002823g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.4e-21 106.7 103 62.1
Nitab4.5_0011788g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.8e-21 106.3 130 50.0
Solyc07g032130.1 Solanum lycopersicum HOM05D003911 ORTHO05D002175 9.1e-21 104.0 108 50.9
CAN.G1243.2 Capsicum annuum HOM05D003911 ORTHO05D002175 2.0e-20 102.8 116 51.7
CAN.G2762.1 Capsicum annuum HOM05D003911 ORTHO05D002175 2.0e-20 102.8 116 51.7
Nitab4.5_0004222g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.0e-20 102.8 116 56.0
Nitab4.5_0005092g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.7e-20 102.4 90 61.1
Nitab4.5_0004888g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.7e-20 100.9 129 48.8
Nitab4.5_0003768g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.3e-19 99.4 119 58.0
CAN.G1364.7 Capsicum annuum HOM05D000163 ORTHO05D000219 2.9e-19 99.0 130 45.4
Nitab4.5_0003598g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.9e-19 99.0 86 62.8
Nitab4.5_0000002g0380 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.8e-19 98.6 131 46.6
CAN.G686.12 Capsicum annuum HOM05D003911 ORTHO05D002175 8.6e-19 97.4 126 45.2
CAN.G141.3 Capsicum annuum HOM05D003911 ORTHO05D002175 1.5e-18 96.7 119 45.4
Nitab4.5_0007148g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.3e-18 95.5 130 45.4
Nitab4.5_0008086g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.3e-18 95.5 105 60.0
Nitab4.5_0000014g0360 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.2e-18 95.1 86 60.5
Nitab4.5_0014328g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.2e-18 95.1 130 49.2
Nitab4.5_0000008g0340 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.5e-18 94.7 111 54.1
Sopen06g006900 Solanum pennellii HOM05D003911 ORTHO05D002175 7.2e-18 94.4 97 51.5
Nitab4.5_0000448g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.5e-18 94.0 130 46.9
Nitab4.5_0000481g0150 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.8e-17 92.4 130 49.2
Nitab4.5_0003336g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.8e-17 92.4 72 70.8
CAN.G267.2 Capsicum annuum HOM05D003911 ORTHO05D002175 4.7e-17 91.7 107 48.6
Nitab4.5_0000199g0060 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.1e-17 91.3 82 62.2
CAN.G1622.3 Capsicum annuum HOM05D003911 ORTHO05D002175 2.3e-16 89.4 109 47.7
Nitab4.5_0000394g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.0e-16 89.0 86 59.3
Nitab4.5_0000722g0130 Nicotiana tabacum HOM05D003911 ORTHO05D010997 4.0e-16 88.6 72 66.7
Nitab4.5_0000238g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.2e-15 87.0 86 55.8
Nitab4.5_0009953g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.0e-15 86.3 71 66.2
Nitab4.5_0003551g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.9e-14 81.6 65 64.6
CAN.G1050.1 Capsicum annuum HOM05D003911 ORTHO05D002175 6.3e-14 81.3 93 49.5
Nitab4.5_0009292g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.8e-13 79.7 60 68.3
Nitab4.5_0005978g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.0e-13 77.8 67 67.2
CAN.G148.6 Capsicum annuum HOM05D003911 ORTHO05D001773 9.2e-13 77.4 82 52.4
CAN.G643.10 Capsicum annuum HOM05D003911 ORTHO05D002175 9.2e-13 77.4 93 46.2
Nitab4.5_0002690g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.2e-13 77.4 56 69.6
PGSC0003DMG400013727 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.2e-12 77.0 132 35.6
PGSC0003DMG400001088 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.6e-12 76.6 132 34.8
Nitab4.5_0001215g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.7e-12 75.9 137 37.2
Nitab4.5_0000030g0290 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.9e-12 74.7 51 72.5
PGSC0003DMG400039961 Solanum tuberosum HOM05D003574 ORTHO05D002175 7.8e-12 74.3 132 34.1
Nitab4.5_0000639g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.0e-11 73.9 137 35.8
Nitab4.5_0004669g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.0e-11 73.9 132 35.6
PGSC0003DMG400023952 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.3e-11 73.6 131 35.1
Nitab4.5_0000679g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.3e-11 72.8 135 35.6
Nitab4.5_0002884g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.9e-11 72.4 132 34.8
PGSC0003DMG400008626 Solanum tuberosum HOM05D003574 ORTHO05D002175 3.9e-11 72.0 132 34.8
CAN.G264.19 Capsicum annuum HOM05D003911 ORTHO05D002175 5.0e-11 71.6 86 44.2
Nitab4.5_0003019g0020 Nicotiana tabacum HOM05D003911 ORTHO05D012628 8.6e-11 70.9 130 36.9
Sopen05g008570 Solanum pennellii HOM05D003574 ORTHO05D002175 8.6e-11 70.9 138 34.1
Sopen03g014810 Solanum pennellii HOM05D003574 ORTHO05D002175 1.1e-10 70.5 132 34.1
Nitab4.5_0006253g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.5e-10 70.1 132 34.1
Nitab4.5_0000002g0570 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.9e-10 69.7 137 35.0
Nitab4.5_0000476g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.9e-10 69.7 130 36.9
Nitab4.5_0000030g0180 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.5e-10 69.3 51 68.6
Nitab4.5_0000169g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.5e-10 69.3 103 51.5
Nitab4.5_0009563g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.3e-10 68.9 135 37.0
Solyc01g058120.1 Solanum lycopersicum HOM05D003911 ORTHO05D002175 3.3e-10 68.9 80 48.8
PGSC0003DMG400020615 Solanum tuberosum HOM05D000995 ORTHO05D001773 3.3e-10 68.9 123 37.4
Nitab4.5_0000079g0310 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.3e-10 68.6 137 35.0
Nitab4.5_0002359g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.5e-10 67.4 137 35.0
Sopen02g001430 Solanum pennellii HOM05D003574 ORTHO05D002175 9.5e-10 67.4 132 32.6
Sopen05g013400 Solanum pennellii HOM05D000424 ORTHO05D000355 9.5e-10 67.4 132 33.3
Nitab4.5_0000003g0310 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.2e-09 67.0 127 35.4
Nitab4.5_0000806g0170 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.2e-09 67.0 134 33.6
Nitab4.5_0003040g0150 Nicotiana tabacum HOM05D003911 ORTHO05D012628 1.2e-09 67.0 134 36.6
Nitab4.5_0001583g0070 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.1e-09 66.2 132 34.1
Nitab4.5_0000913g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.8e-09 65.9 131 37.4
CAN.G19.1 Capsicum annuum HOM05D000703 ORTHO05D026988 3.6e-09 65.5 85 45.9
Nitab4.5_0000736g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.6e-09 65.5 122 35.2
Nitab4.5_0002311g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.7e-09 65.1 109 49.5
Solyc05g150133.1 Solanum lycopersicum HOM05D003574 ORTHO05D002175 1.0e-08 63.9 132 31.8
CAN.G1130.7 Capsicum annuum HOM05D000995 ORTHO05D001773 4.0e-08 62.0 86 46.5
Nitab4.5_0002393g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.0e-08 62.0 132 34.8
Nitab4.5_0006058g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.0e-08 62.0 42 71.4
CAN.G168.3 Capsicum annuum HOM05D003911 ORTHO05D002175 6.8e-08 61.2 73 49.3
Nitab4.5_0000262g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.8e-08 61.2 86 45.3
Nitab4.5_0003811g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.9e-08 60.8 128 35.2
Nitab4.5_0000003g0850 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.2e-07 60.5 45 66.7
Solyc12g038730.1 Solanum lycopersicum HOM05D003911 ORTHO05D002175 2.0e-07 59.7 49 61.2
Nitab4.5_0001194g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.6e-07 59.3 128 35.2
Nitab4.5_0004570g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.4e-07 58.9 130 33.1
CAN.G117.3 Capsicum annuum HOM05D003911 ORTHO05D002175 4.4e-07 58.5 102 36.3
Nitab4.5_0010853g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.5e-07 57.8 132 31.1
Nitab4.5_0000716g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.3e-06 57.0 125 35.2
Nitab4.5_0004446g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.7e-06 56.6 128 32.0
Nitab4.5_0018043g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.7e-06 55.5 55 56.4
Nitab4.5_0001077g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.4e-06 54.7 132 34.1
Nitab4.5_0003139g0120 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.4e-06 54.7 70 58.6
Solyc09g062990.2 Solanum lycopersicum HOM05D003911 ORTHO05D002175 6.4e-06 54.7 132 33.3
Nitab4.5_0002538g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.3e-06 54.3 126 32.5


User provided reference genes

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