Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000861g0040 Nicotiana tabacum HOM05D007500 ORTHO05D009197 2.0e-56 222.2 118 100.0
Nitab4.5_0001404g0040 Nicotiana tabacum HOM05D007500 ORTHO05D009197 1.6e-53 212.6 118 95.8
PGSC0003DMG400029106 Solanum tuberosum HOM05D007500 ORTHO05D009197 6.0e-48 194.1 118 86.4
Peaxi162Scf00128g00124 Petunia axillaris HOM05D007500 ORTHO05D009197 4.3e-46 188.0 118 82.2
Solyc05g015330.1 Solanum lycopersicum HOM05D007500 ORTHO05D009197 7.3e-46 187.2 118 83.9
Sopen05g010600 Solanum pennellii HOM05D007500 ORTHO05D009197 1.2e-45 186.4 118 83.9
CAN.G43.17 Capsicum annuum HOM05D007500 ORTHO05D009197 7.8e-40 167.2 110 83.6
CSS0001813 Camellia sinensis var. sinensis HOM05D007500 ORTHO05D009197 1.5e-35 152.9 117 71.8
Dinv14836 Davidia involucrata HOM05D007500 ORTHO05D009197 1.5e-35 152.9 118 70.3
CANSAT01G0539 Cannabis sativa HOM05D007500 ORTHO05D009197 4.4e-35 151.4 116 67.2
MELO3C011458.2 Cucumis melo HOM05D007500 ORTHO05D009197 4.4e-35 151.4 116 67.2
CsaV3_6G032240 Cucumis sativus L. HOM05D007500 ORTHO05D009197 1.7e-34 149.4 116 66.4
Cc11_g16840 Coffea canephora HOM05D007500 ORTHO05D009197 4.9e-34 147.9 115 69.6
Atru.chr11.2314 Acer truncatum HOM05D007500 ORTHO05D009197 1.4e-33 146.4 114 65.8
Haze_12411 Corylus avellana HOM05D007500 ORTHO05D009197 1.4e-33 146.4 116 64.7
PSO541G0382 Papaver somniferum HOM05D007500 ORTHO05D009197 5.4e-33 144.4 115 64.3
ClCG08G010070 Citrullus lanatus HOM05D007500 ORTHO05D009197 7.1e-33 144.1 114 64.9
Sed0012176 Sechium edule HOM05D007500 ORTHO05D009197 9.2e-33 143.7 114 62.3
MSTRG.7998 Avicennia marina HOM05D007500 ORTHO05D009197 3.5e-32 141.7 118 63.6
CiPaw.05G110500 Carya illinoinensis HOM05D007500 ORTHO05D009197 3.5e-32 141.7 115 65.2
Manes.12G012100 Manihot esculenta HOM05D007500 ORTHO05D009197 3.5e-32 141.7 115 62.6
QL03p052860 Quercus lobata HOM05D007500 ORTHO05D009197 4.6e-32 141.4 117 64.1
QL03p053117 Quercus lobata HOM05D007500 ORTHO05D009197 4.6e-32 141.4 117 64.1
MBI01_g29007_MAGBIO Magnolia biondii HOM05D007500 ORTHO05D009197 7.8e-32 140.6 115 64.3
Nn5g28851 Nelumbo nucifera HOM05D007500 ORTHO05D009197 7.8e-32 140.6 114 64.0
QL93p2010_0098 Quercus lobata HOM05D007500 ORTHO05D009197 7.8e-32 140.6 116 64.7
Aa31LG9G13320 Aethionema arabicum HOM05D007500 ORTHO05D009197 2.3e-31 139.0 114 64.0
Sabra01G0039500 Salix brachista HOM05D007500 ORTHO05D009197 3.0e-31 138.7 115 60.9
Ciclev10033679m.g Citrus clementina HOM05D007500 ORTHO05D009197 3.9e-31 138.3 114 65.8
Lsat_1_v5_gn_8_131281 Lactuca sativa HOM05D007500 ORTHO05D009197 3.9e-31 138.3 117 61.5
Potri.001G055000 Populus trichocarpa HOM05D007500 ORTHO05D009197 5.1e-31 137.9 115 60.9
AT5G43250 Arabidopsis thaliana HOM05D007500 ORTHO05D009197 6.6e-31 137.5 116 64.7
COL.COLO4_20391 Corchorus olitorius HOM05D007500 ORTHO05D009197 6.6e-31 137.5 118 61.9
TWI18G0612 Tripterygium wilfordii HOM05D007500 ORTHO05D009197 6.6e-31 137.5 114 65.8
Aqoxy6G00433 Aquilegia oxysepala HOM05D007500 ORTHO05D009197 1.1e-30 136.7 115 64.3
arahy.Tifrunner.gnm1.ann1.Z93F9T Arachis hypogaea HOM05D007500 ORTHO05D009197 1.1e-30 136.7 114 62.3
FAN17G2194 Fragaria x ananassa HOM05D007500 ORTHO05D009197 1.1e-30 136.7 116 59.5
FAN22G1415 Fragaria x ananassa HOM05D007500 ORTHO05D009197 1.5e-30 136.3 116 59.5
Sp2g08040 Schrenkiella parvula HOM05D007500 ORTHO05D009197 3.3e-30 135.2 114 64.9
Sc14g0009050 Simmondsia chinensis HOM05D007500 ORTHO05D009197 3.3e-30 135.2 115 63.5
Cfa009364 Carpinus fangiana HOM05D007500 ORTHO05D009197 4.3e-30 134.8 116 62.1
FAN07G2442 Fragaria x ananassa HOM05D007500 ORTHO05D009197 4.3e-30 134.8 116 59.5
SGA_v2.0_scaffold9G04716 Striga asiatica HOM05D007500 ORTHO05D009197 4.3e-30 134.8 122 61.5
Duzib268G0307 Durio zibethinus HOM05D007500 ORTHO05D009197 5.6e-30 134.4 117 62.4
BcaC06g31713 Brassica carinata HOM05D007500 ORTHO05D009197 7.3e-30 134.0 114 64.0
BcaC06g31714 Brassica carinata HOM05D007500 ORTHO05D009197 7.3e-30 134.0 114 64.0
AL8G17240 Arabidopsis lyrata HOM05D007500 ORTHO05D009197 1.2e-29 133.3 114 64.0
Glyma.18G007100 Glycine max HOM05D007500 ORTHO05D009197 1.2e-29 133.3 116 62.9
C07p25790 Brassica napus HOM05D007500 ORTHO05D009197 1.6e-29 132.9 114 63.2
Carub.0008s0545 Capsella rubella HOM05D007500 ORTHO05D009197 1.6e-29 132.9 117 64.1
Migut.K00728 Erythranthe guttata HOM05D007500 ORTHO05D009197 1.6e-29 132.9 120 60.0
Thhalv10003290m.g Eutrema salsugineum HOM05D007500 ORTHO05D009197 1.6e-29 132.9 114 63.2
FAN12G0274 Fragaria x ananassa HOM05D007500 ORTHO05D009197 1.6e-29 132.9 116 57.8
Gohir.D02G150000 Gossypium hirsutum HOM05D007500 ORTHO05D009197 2.8e-29 132.1 117 59.8
Gorai.005G168300 Gossypium raimondii HOM05D007500 ORTHO05D009197 2.8e-29 132.1 117 59.8
BcaC06g34668 Brassica carinata HOM05D007500 ORTHO05D009197 3.6e-29 131.7 114 62.3
BolC7t43101H Brassica oleracea HOM05D007500 ORTHO05D009197 3.6e-29 131.7 114 62.3
CARHR180640 Cardamine hirsuta HOM05D007500 ORTHO05D009197 4.7e-29 131.3 116 63.8
FvH4_4g23840 Fragaria vesca HOM05D007500 ORTHO05D009197 4.7e-29 131.3 116 56.9
Gohir.A03G126600 Gossypium hirsutum HOM05D007500 ORTHO05D009197 4.7e-29 131.3 117 59.8
A06p47960 Brassica napus HOM05D007500 ORTHO05D009197 6.2e-29 131.0 114 62.3
BraA06t27666Z Brassica rapa HOM05D007500 ORTHO05D009197 6.2e-29 131.0 114 62.3
TAR381G0854 Trochodendron aralioides HOM05D007500 ORTHO05D009197 6.2e-29 131.0 116 60.3
Ca_16464_v3 Cicer arietinum L. HOM05D007500 ORTHO05D009197 1.1e-28 130.2 115 60.9
Glyma.11G250000 Glycine max HOM05D007500 ORTHO05D009197 1.1e-28 130.2 116 62.1
PGR102G0196 Punica granatum HOM05D007500 ORTHO05D009197 2.4e-28 129.0 116 61.2
THA.LOC104814194 Tarenaya hassleriana HOM05D007500 ORTHO05D009197 2.4e-28 129.0 115 61.7
Cpa.g.sc43.48 Carica papaya HOM05D007500 ORTHO05D009197 4.0e-28 128.3 117 60.7
Thecc.02G209700 Theobroma cacao HOM05D007500 ORTHO05D009197 5.2e-28 127.9 119 57.1
SalBow2G0500 Salvia bowleyana HOM05D007500 ORTHO05D009197 6.9e-28 127.5 109 60.6
Phvul.001G261300 Phaseolus vulgaris HOM05D007500 ORTHO05D009197 8.9e-28 127.1 117 59.8
PSO675G4883 Papaver somniferum HOM05D007500 ORTHO05D009197 1.2e-27 126.7 105 62.9
DCAR_031200 Daucus carota HOM05D007500 ORTHO05D009197 2.0e-27 125.9 115 58.3
HanXRQChr09g0258281 Helianthus annuus HOM05D007500 ORTHO05D009197 2.6e-27 125.6 119 58.0
VMungo1383G3421 Vigna mungo HOM05D007500 ORTHO05D009197 2.6e-27 125.6 116 59.5
Prupe.1G226700 Prunus persica HOM05D007500 ORTHO05D009197 5.8e-27 124.4 130 55.4
AUR62024115 Chenopodium quinoa HOM05D007500 ORTHO05D009197 7.6e-27 124.0 113 60.2
Medtr3g085430 Medicago truncatula HOM05D007500 ORTHO05D009197 7.6e-27 124.0 117 59.0
Actinidia30653 Actinidia chinensis HOM05D007500 ORTHO05D009197 1.7e-26 122.9 83 74.7
EL10Ac6g13495 Beta vulgaris HOM05D007500 ORTHO05D009197 2.2e-26 122.5 114 55.3
RcHm_v2.0_Chr4g0430411 Rosa chinensis HOM05D007500 ORTHO05D009197 2.9e-26 122.1 106 58.5
Rhsim12G0026300 Rhododendron simsii HOM05D007500 ORTHO05D009197 6.4e-26 120.9 107 63.6
Ah.03g136190 Amaranthus hybridus HOM05D007500 ORTHO05D009197 1.1e-25 120.2 116 56.0
ECA233G2547 Erigeron canadensis HOM05D007500 ORTHO05D009197 1.4e-25 119.8 107 59.8
MD16G1118400 Malus domestica HOM05D007500 ORTHO05D009197 1.4e-25 119.8 121 52.9
Psat5g095440 Pisum sativum HOM05D007500 ORTHO05D009197 2.4e-25 119.0 118 55.9
unitig_26.g10395 Utricularia gibba HOM05D007500 ORTHO05D009197 3.2e-25 118.6 116 55.2
MD13G1118300 Malus domestica HOM05D007500 ORTHO05D009197 5.4e-25 117.9 123 52.8
Lj6g0001546 Lotus japonicus HOM05D007500 ORTHO05D009197 4.6e-24 114.8 116 52.6
TPR.G28279 Trifolium pratense HOM05D007500 ORTHO05D009197 4.6e-24 114.8 98 62.2
Lalb_Chr08g0230661 Lupinus albus HOM05D007500 ORTHO05D009197 1.3e-23 113.2 121 53.7
CDE06G2379 Ceratophyllum demersum HOM05D007500 ORTHO05D009197 3.9e-23 111.7 116 54.3
ATR1120G099 Amborella trichopoda HOM05D007500 ORTHO05D009197 8.7e-23 110.5 114 58.8
AUR62005615 Chenopodium quinoa HOM05D007500 ORTHO05D009197 8.7e-23 110.5 107 57.0
HPP92_002864 Vanilla planifolia HOM05D007500 ORTHO05D009197 2.6e-19 99.0 99 55.6
Zm00001eb122050 Zea mays HOM05D007500 ORTHO05D009197 1.1e-17 93.6 123 44.7
Os01g0183400 Oryza sativa ssp. japonica HOM05D007500 ORTHO05D009197 7.1e-17 90.9 121 43.0
CAN.G1248.23 Capsicum annuum HOM05D000764 ORTHO05D009197 6.7e-15 84.3 51 88.2
SEGI_35529 Sequoiadendron giganteum HOM05D007500 ORTHO05D009197 1.7e-10 69.7 76 47.4
Pp3c13_23370 Physcomitrium patens HOM05D020496 ORTHO05D009197 6.7e-07 57.8 134 32.1
Pp3c13_23373 Physcomitrium patens HOM05D020496 ORTHO05D009197 6.7e-07 57.8 134 32.1
SMO358G0741 Selaginella moellendorffii HOM05D020496 ORTHO05D009197 1.5e-06 56.6 76 42.1
CARHR257820 Cardamine hirsuta HOM05D000789 ORTHO05D000897 5.6e-06 54.7 84 41.7
CAN.G65.39 Capsicum annuum HOM05D000789 ORTHO05D000897 7.4e-06 54.3 75 40.0
CAN.G65.47 Capsicum annuum HOM05D000789 ORTHO05D000897 9.6e-06 53.9 75 40.0


User provided reference genes

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