Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000860g0200 Nicotiana tabacum HOM05D007254 ORTHO05D009002 1.1e-37 159.5 78 100.0
Nitab4.5_0004859g0100 Nicotiana tabacum HOM05D007254 ORTHO05D009002 3.4e-23 111.3 54 96.3
CAN.G940.5 Capsicum annuum HOM05D007254 ORTHO05D009002 2.7e-20 101.7 57 80.7
Solyc08g006080.1 Solanum lycopersicum HOM05D007254 ORTHO05D009002 2.3e-19 98.6 54 81.5
Sopen08g002050 Solanum pennellii HOM05D007254 ORTHO05D009002 2.3e-19 98.6 54 81.5
PGSC0003DMG400014857 Solanum tuberosum HOM05D007254 ORTHO05D009002 2.3e-19 98.6 54 81.5
Gorai.008G132700 Gossypium raimondii HOM05D007254 ORTHO05D009002 2.9e-19 98.2 62 77.4
CSS0032984 Camellia sinensis var. sinensis HOM05D007254 ORTHO05D009002 3.8e-19 97.8 51 86.3
Aqoxy7G02676 Aquilegia oxysepala HOM05D007254 ORTHO05D009002 6.6e-19 97.1 52 82.7
Dinv13245 Davidia involucrata HOM05D007254 ORTHO05D009002 8.6e-19 96.7 51 86.3
Gohir.D12G121900 Gossypium hirsutum HOM05D007254 ORTHO05D009002 8.6e-19 96.7 62 75.8
PSO063G7066 Papaver somniferum HOM05D007254 ORTHO05D009002 1.9e-18 95.5 54 81.5
PSO170G3828 Papaver somniferum HOM05D007254 ORTHO05D009002 1.9e-18 95.5 54 81.5
THA.LOC104812613 Tarenaya hassleriana HOM05D007254 ORTHO05D009002 1.9e-18 95.5 54 79.6
CANSAT25G1896 Cannabis sativa HOM05D007254 ORTHO05D009002 2.5e-18 95.1 50 86.0
vmacro21974 Vaccinium macrocarpon HOM05D007254 ORTHO05D009002 2.5e-18 95.1 50 84.0
Cc10_g10060 Coffea canephora HOM05D007254 ORTHO05D009002 3.3e-18 94.7 56 78.6
HanXRQChr12g0384041 Helianthus annuus HOM05D007254 ORTHO05D009002 3.3e-18 94.7 53 86.8
RcHm_v2.0_Chr6g0305491 Rosa chinensis HOM05D007254 ORTHO05D009002 3.3e-18 94.7 53 83.0
FAN15G2622 Fragaria x ananassa HOM05D007254 ORTHO05D009002 5.5e-18 94.0 49 85.7
Gohir.A12G118100 Gossypium hirsutum HOM05D007254 ORTHO05D009002 5.5e-18 94.0 62 72.6
FvH4_2g36410 Fragaria vesca HOM05D007254 ORTHO05D009002 7.2e-18 93.6 53 81.1
PGR044G2739 Punica granatum HOM05D007254 ORTHO05D009002 1.2e-17 92.8 53 81.1
Aa31LG4G570 Aethionema arabicum HOM05D007254 ORTHO05D009002 1.6e-17 92.4 54 77.8
AL2G41210 Arabidopsis lyrata HOM05D007254 ORTHO05D009002 1.6e-17 92.4 54 79.6
Prupe.1G455400 Prunus persica HOM05D007254 ORTHO05D009002 1.6e-17 92.4 53 81.1
VMungo0251G2754 Vigna mungo HOM05D007254 ORTHO05D009002 2.1e-17 92.0 49 87.8
AT1G80290 Arabidopsis thaliana HOM05D007254 ORTHO05D009002 2.8e-17 91.7 54 79.6
Phvul.002G252600 Phaseolus vulgaris HOM05D007254 ORTHO05D009002 2.8e-17 91.7 49 85.7
TAR636G2989 Trochodendron aralioides HOM05D007254 ORTHO05D009002 3.6e-17 91.3 51 80.4
Cfa013312 Carpinus fangiana HOM05D007254 ORTHO05D009002 6.1e-17 90.5 51 76.5
Ciclev10010680m.g Citrus clementina HOM05D007254 ORTHO05D009002 6.1e-17 90.5 48 85.4
Manes.11G154500 Manihot esculenta HOM05D007254 ORTHO05D009002 6.1e-17 90.5 49 85.7
Cpa.g.sc488.3 Carica papaya HOM05D007254 ORTHO05D009002 8.0e-17 90.1 51 76.5
Lsat_1_v5_gn_3_26521 Lactuca sativa HOM05D007254 ORTHO05D009002 8.0e-17 90.1 53 77.4
Sp5g35520 Schrenkiella parvula HOM05D007254 ORTHO05D009002 8.0e-17 90.1 54 77.8
Thhalv10000547m.g Eutrema salsugineum HOM05D007254 ORTHO05D009002 1.0e-16 89.7 54 77.8
Glyma.15G027100 Glycine max HOM05D007254 ORTHO05D009002 1.0e-16 89.7 52 84.6
Potri.006G278400 Populus trichocarpa HOM05D007254 ORTHO05D009002 1.0e-16 89.7 51 78.4
Atru.chr7.2684 Acer truncatum HOM05D007254 ORTHO05D009002 1.4e-16 89.4 49 81.6
CARHR074200 Cardamine hirsuta HOM05D007254 ORTHO05D009002 1.4e-16 89.4 59 76.3
QL12p025906 Quercus lobata HOM05D007254 ORTHO05D009002 1.4e-16 89.4 51 76.5
Sabra06G0216000 Salix brachista HOM05D007254 ORTHO05D009002 1.4e-16 89.4 51 78.4
ECA246G3277 Erigeron canadensis HOM05D007254 ORTHO05D009002 1.8e-16 89.0 53 73.6
Migut.A00450 Erythranthe guttata HOM05D007254 ORTHO05D009002 1.8e-16 89.0 50 78.0
Duzib150G0445 Durio zibethinus HOM05D007254 ORTHO05D009002 2.3e-16 88.6 62 67.7
BcaC03g15986 Brassica carinata HOM05D007254 ORTHO05D009002 3.0e-16 88.2 54 75.9
A02p23670 Brassica napus HOM05D007254 ORTHO05D009002 3.0e-16 88.2 54 75.9
C02p37430 Brassica napus HOM05D007254 ORTHO05D009002 3.0e-16 88.2 54 75.9
BolC2t09755H Brassica oleracea HOM05D007254 ORTHO05D009002 3.0e-16 88.2 54 75.9
BraA02t07360Z Brassica rapa HOM05D007254 ORTHO05D009002 3.0e-16 88.2 54 75.9
Haze_21799 Corylus avellana HOM05D007254 ORTHO05D009002 3.0e-16 88.2 51 74.5
MD15G1102400 Malus domestica HOM05D007254 ORTHO05D009002 3.0e-16 88.2 53 77.4
Thecc.09G003000 Theobroma cacao HOM05D007254 ORTHO05D009002 3.0e-16 88.2 58 70.7
TWI34G0126 Tripterygium wilfordii HOM05D007254 ORTHO05D009002 3.0e-16 88.2 49 77.6
Eucgr.C04240 Eucalyptus grandis HOM05D007254 ORTHO05D009002 4.0e-16 87.8 53 73.6
DCAR_004577 Daucus carota HOM05D007254 ORTHO05D009002 6.8e-16 87.0 48 79.2
BcaB05g25281 Brassica carinata HOM05D007254 ORTHO05D009002 8.9e-16 86.7 54 74.1
CiPaw.08G021500 Carya illinoinensis HOM05D007254 ORTHO05D009002 8.9e-16 86.7 56 71.4
Ca_12841_v3 Cicer arietinum L. HOM05D007254 ORTHO05D009002 1.2e-15 86.3 49 79.6
Sed0008272 Sechium edule HOM05D007254 ORTHO05D009002 1.2e-15 86.3 49 75.5
Sc09g0007400 Simmondsia chinensis HOM05D007254 ORTHO05D009002 1.2e-15 86.3 57 71.9
ClCG05G026310 Citrullus lanatus HOM05D007254 ORTHO05D009002 2.0e-15 85.5 53 75.5
Medtr1g009180 Medicago truncatula HOM05D007254 ORTHO05D009002 2.0e-15 85.5 48 81.2
MSTRG.25770 Avicennia marina HOM05D007254 ORTHO05D009002 2.6e-15 85.1 51 70.6
ATR0626G074 Amborella trichopoda HOM05D007254 ORTHO05D009002 3.4e-15 84.7 51 74.5
MELO3C003600.2 Cucumis melo HOM05D007254 ORTHO05D009002 3.4e-15 84.7 53 71.7
TPR.G27365 Trifolium pratense HOM05D007254 ORTHO05D009002 3.4e-15 84.7 48 81.2
unitig_32.g10941 Utricularia gibba HOM05D007254 ORTHO05D009002 4.4e-15 84.3 49 79.6
Ca_12843_v3 Cicer arietinum L. HOM05D007254 ORTHO05D009002 5.7e-15 84.0 49 77.6
CsaV3_3G047290 Cucumis sativus L. HOM05D007254 ORTHO05D009002 5.7e-15 84.0 53 71.7
Lj3g0004031 Lotus japonicus HOM05D007254 ORTHO05D009002 5.7e-15 84.0 55 76.4
arahy.Tifrunner.gnm1.ann1.2B8833 Arachis hypogaea HOM05D007254 ORTHO05D009002 1.3e-14 82.8 48 79.2
arahy.Tifrunner.gnm1.ann1.CY5H5G Arachis hypogaea HOM05D007254 ORTHO05D009002 1.3e-14 82.8 48 79.2
Lalb_Chr22g0361141 Lupinus albus HOM05D007254 ORTHO05D009002 1.3e-14 82.8 49 79.6
CDE06G0391 Ceratophyllum demersum HOM05D007254 ORTHO05D009002 9.2e-13 76.6 53 67.9
AUR62020641 Chenopodium quinoa HOM05D007254 ORTHO05D009002 9.2e-13 76.6 56 67.9
MBI16_g18202_MAGBIO Magnolia biondii HOM05D007254 ORTHO05D009002 4.6e-12 74.3 51 66.7
AUR62038737 Chenopodium quinoa HOM05D007254 ORTHO05D009002 1.3e-11 72.8 56 64.3
FAN27G2933 Fragaria x ananassa HOM05D007254 ORTHO05D009002 2.3e-11 72.0 37 83.8
unitig_748.g8172 Utricularia gibba HOM05D007254 ORTHO05D009002 6.6e-11 70.5 52 65.4
SEGI_23529 Sequoiadendron giganteum HOM05D007254 ORTHO05D009002 4.3e-10 67.8 51 64.7
Zm00001eb174600 Zea mays HOM05D007254 ORTHO05D009002 2.1e-09 65.5 53 64.2
Carub.0003s3026 Capsella rubella HOM05D007254 ORTHO05D009002 2.8e-09 65.1 36 80.6
FAN20G0412 Fragaria x ananassa HOM05D007254 ORTHO05D009002 1.2e-07 59.7 39 66.7
Psat6g034520 Pisum sativum HOM05D007254 ORTHO05D009002 3.4e-07 58.2 34 76.5
AagrBONN_evm.TU.Sc2ySwM_228.1205 Anthoceros agrestis HOM05D007254 ORTHO05D009002 4.4e-07 57.8 69 47.8
Oeu008784.1 Olea europaea HOM05D007254 ORTHO05D009002 1.7e-06 55.8 31 83.9
CBR_g48623 Chara braunii HOM05D007254 ORTHO05D009002 8.3e-06 53.5 48 52.1


User provided reference genes

Program Settings