Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000859g0240 Nicotiana tabacum HOM05D007090 ORTHO05D008993 1.3e-158 563.1 310 100.0
Solyc01g090920.3 Solanum lycopersicum HOM05D007090 ORTHO05D008993 7.7e-95 351.3 328 67.7
Nitab4.5_0008963g0010 Nicotiana tabacum HOM05D007090 ORTHO05D008993 2.5e-93 346.3 310 66.5
Sopen01g036660 Solanum pennellii HOM05D007090 ORTHO05D008993 7.9e-92 341.3 320 66.9
CAN.G1469.17 Capsicum annuum HOM05D007090 ORTHO05D008993 1.7e-89 333.6 310 65.2
PGSC0003DMG400025974 Solanum tuberosum HOM05D007090 ORTHO05D008993 1.5e-82 310.5 320 62.5
Peaxi162Scf00803g00118 Petunia axillaris HOM05D007090 ORTHO05D008993 4.1e-64 249.2 204 70.1
Lsat_1_v5_gn_4_45521 Lactuca sativa HOM05D007090 ORTHO05D008993 1.5e-58 230.7 309 49.5
Potri.014G060700 Populus trichocarpa HOM05D007090 ORTHO05D008993 1.0e-51 208.0 310 47.4
MSTRG.4910 Avicennia marina HOM05D007090 ORTHO05D008993 2.3e-51 206.8 311 43.1
Cc02_g24410 Coffea canephora HOM05D007090 ORTHO05D008993 4.0e-51 206.1 296 47.3
HanXRQChr03g0088131 Helianthus annuus HOM05D007090 ORTHO05D008993 8.9e-51 204.9 310 47.7
Migut.N01613 Erythranthe guttata HOM05D007090 ORTHO05D008993 7.5e-50 201.8 275 46.2
vmacro13441 Vaccinium macrocarpon HOM05D007090 ORTHO05D008993 1.3e-49 201.1 352 40.6
TAR375G0613 Trochodendron aralioides HOM05D007090 ORTHO05D008993 1.7e-49 200.7 331 43.2
Eucgr.E01513 Eucalyptus grandis HOM05D007090 ORTHO05D008993 2.7e-47 193.4 320 41.6
Thecc.01G382600 Theobroma cacao HOM05D007090 ORTHO05D008993 4.6e-47 192.6 279 44.4
SalBow5G5305 Salvia bowleyana HOM05D007090 ORTHO05D008993 1.0e-46 191.4 307 42.3
PGR042G2604 Punica granatum HOM05D007090 ORTHO05D008993 1.7e-46 190.7 296 42.6
CiPaw.13G032600 Carya illinoinensis HOM05D007090 ORTHO05D008993 2.3e-46 190.3 289 43.6
Sc26g0001310 Simmondsia chinensis HOM05D007090 ORTHO05D008993 2.3e-46 190.3 322 42.2
Gohir.D11G083500 Gossypium hirsutum HOM05D007090 ORTHO05D008993 5.0e-46 189.1 316 40.8
Oeu051923.2 Olea europaea HOM05D007090 ORTHO05D008993 6.6e-46 188.7 316 41.1
DCAR_015886 Daucus carota HOM05D007090 ORTHO05D008993 7.3e-45 185.3 277 48.0
CANSAT56G0199 Cannabis sativa HOM05D007090 ORTHO05D008993 2.8e-44 183.3 296 42.2
Prupe.2G138200 Prunus persica HOM05D007090 ORTHO05D008993 4.7e-44 182.6 317 42.0
ECA234G0545 Erigeron canadensis HOM05D007090 ORTHO05D008993 6.2e-44 182.2 272 47.1
CANSAT56G4322 Cannabis sativa HOM05D007090 ORTHO05D008993 5.2e-43 179.1 296 41.6
GSVIVG01027682001 Vitis vinifera HOM05D007090 ORTHO05D008993 6.8e-43 178.7 309 40.1
Manes.05G048800 Manihot esculenta HOM05D007090 ORTHO05D008993 4.4e-42 176.0 283 41.7
Hund17045 Selenicereus undatus HOM05D007090 ORTHO05D008993 5.8e-42 175.6 318 40.3
COL.COLO4_12490 Corchorus olitorius HOM05D007090 ORTHO05D008993 2.9e-41 173.3 323 38.4
PSO782G4184 Papaver somniferum HOM05D007090 ORTHO05D008993 3.7e-41 172.9 332 38.9
vmacro22435 Vaccinium macrocarpon HOM05D007090 ORTHO05D008993 1.4e-40 171.0 294 39.8
PSO063G1752 Papaver somniferum HOM05D007090 ORTHO05D008993 3.2e-40 169.9 334 37.7
Rhsim07G0031100 Rhododendron simsii HOM05D007090 ORTHO05D008993 7.0e-40 168.7 311 41.8
VMungo0331G0297 Vigna mungo HOM05D007090 ORTHO05D008993 7.0e-40 168.7 318 40.6
Lalb_Chr12g0207911 Lupinus albus HOM05D007090 ORTHO05D008993 1.6e-39 167.5 310 39.0
Lj3g0011300 Lotus japonicus HOM05D007090 ORTHO05D008993 2.1e-39 167.2 316 40.8
Actinidia22817 Actinidia chinensis HOM05D007090 ORTHO05D008993 1.0e-38 164.9 295 40.7
Sabra14G0044500 Salix brachista HOM05D007090 ORTHO05D008993 1.7e-38 164.1 313 41.9
QL04p038719 Quercus lobata HOM05D007090 ORTHO05D008993 3.9e-38 162.9 315 37.5
MD02G1210400 Malus domestica HOM05D007090 ORTHO05D008993 8.6e-38 161.8 317 38.8
Actinidia22762 Actinidia chinensis HOM05D007090 ORTHO05D008993 1.1e-37 161.4 256 42.2
TPR.G4946 Trifolium pratense HOM05D007090 ORTHO05D008993 1.5e-37 161.0 279 41.6
Ca_19835_v3 Cicer arietinum L. HOM05D007090 ORTHO05D008993 4.3e-37 159.5 311 38.3
Phvul.010G072500 Phaseolus vulgaris HOM05D007090 ORTHO05D008993 5.6e-37 159.1 312 39.1
CsaV3_6G008990 Cucumis sativus L. HOM05D007090 ORTHO05D008993 1.2e-36 157.9 313 41.2
Haze_02682 Corylus avellana HOM05D007090 ORTHO05D008993 1.6e-36 157.5 292 37.3
Gorai.007G089100 Gossypium raimondii HOM05D007090 ORTHO05D008993 2.1e-36 157.1 316 37.0
arahy.Tifrunner.gnm1.ann1.UP4D5N Arachis hypogaea HOM05D007090 ORTHO05D008993 4.7e-36 156.0 271 37.6
Thhalv10028898m.g Eutrema salsugineum HOM05D007090 ORTHO05D008993 1.4e-35 154.5 279 39.1
Duzib138G0673 Durio zibethinus HOM05D007090 ORTHO05D008993 4.0e-35 152.9 321 38.3
Sp6g00210 Schrenkiella parvula HOM05D007090 ORTHO05D008993 8.9e-35 151.8 306 36.6
CSS0011917 Camellia sinensis var. sinensis HOM05D007090 ORTHO05D008993 1.2e-34 151.4 203 45.8
Ciclev10021511m.g Citrus clementina HOM05D007090 ORTHO05D008993 2.0e-34 150.6 318 39.9
Dinv44119 Davidia involucrata HOM05D007090 ORTHO05D008993 7.5e-34 148.7 290 40.0
THA.LOC104803743 Tarenaya hassleriana HOM05D007090 ORTHO05D008993 1.3e-33 147.9 317 35.3
FAN10G1641 Fragaria x ananassa HOM05D007090 ORTHO05D008993 2.9e-33 146.7 311 38.3
Glyma.03G032000 Glycine max HOM05D007090 ORTHO05D008993 4.9e-33 146.0 316 37.0
RcHm_v2.0_Chr1g0349121 Rosa chinensis HOM05D007090 ORTHO05D008993 4.9e-33 146.0 303 39.3
Ah.08g212650 Amaranthus hybridus HOM05D007090 ORTHO05D008993 1.4e-32 144.4 322 35.4
FvH4_7g11100 Fragaria vesca HOM05D007090 ORTHO05D008993 1.4e-32 144.4 305 37.4
Aa31LG5G170 Aethionema arabicum HOM05D007090 ORTHO05D008993 2.4e-32 143.7 320 37.8
Medtr4g026500 Medicago truncatula HOM05D007090 ORTHO05D008993 2.4e-32 143.7 319 35.7
Psat7g236160 Pisum sativum HOM05D007090 ORTHO05D008993 3.2e-32 143.3 309 37.2
SGA_v2.0_scaffold11G05536 Striga asiatica HOM05D007090 ORTHO05D008993 3.2e-32 143.3 302 36.1
unitig_748.g7116 Utricularia gibba HOM05D007090 ORTHO05D008993 2.7e-31 140.2 302 35.1
TWI23G0238 Tripterygium wilfordii HOM05D007090 ORTHO05D008993 3.5e-31 139.8 323 34.1
Carub.0006s3709 Capsella rubella HOM05D007090 ORTHO05D008993 4.6e-31 139.4 288 35.4
Aqoxy5G03901 Aquilegia oxysepala HOM05D007090 ORTHO05D008993 1.7e-30 137.5 316 35.8
FAN06G0781 Fragaria x ananassa HOM05D007090 ORTHO05D008993 2.3e-30 137.1 313 36.4
Os04g0534300 Oryza sativa ssp. japonica HOM05D007090 ORTHO05D008993 3.0e-30 136.7 292 34.6
Atru.chr5.252 Acer truncatum HOM05D007090 ORTHO05D008993 3.9e-30 136.3 312 36.5
EL10Ac1g00840 Beta vulgaris HOM05D007090 ORTHO05D008993 3.9e-30 136.3 173 46.2
AT1G73440 Arabidopsis thaliana HOM05D007090 ORTHO05D008993 1.1e-29 134.8 302 34.8
arahy.Tifrunner.gnm1.ann1.KQM8V4 Arachis hypogaea HOM05D007090 ORTHO05D008993 3.3e-29 133.3 270 34.8
FAN10G4025 Fragaria x ananassa HOM05D007090 ORTHO05D008993 9.5e-29 131.7 184 44.0
AL6G53360 Arabidopsis lyrata HOM05D007090 ORTHO05D008993 6.2e-28 129.0 292 34.9
ATR0317G013 Amborella trichopoda HOM05D007090 ORTHO05D008993 1.8e-27 127.5 187 41.7
Eucgr.E01517 Eucalyptus grandis HOM05D007090 ORTHO05D008993 4.0e-27 126.3 78 73.1
Nn1g01037 Nelumbo nucifera HOM05D007090 ORTHO05D008993 6.8e-27 125.6 330 35.5
FAN06G2008 Fragaria x ananassa HOM05D007090 ORTHO05D008993 8.9e-27 125.2 311 35.0
Hma1.2p1_0005F.1_g004490 Hydrangea macrophylla HOM05D007090 ORTHO05D008993 2.6e-26 123.6 308 36.0
FAN01G0616 Fragaria x ananassa HOM05D007090 ORTHO05D008993 3.4e-26 123.2 343 35.9
ClCG06G002820 Citrullus lanatus HOM05D007090 ORTHO05D008993 9.9e-26 121.7 326 34.0
FAN03G3027 Fragaria x ananassa HOM05D007090 ORTHO05D008993 6.4e-25 119.0 387 29.7
MELO3C022245.2 Cucumis melo HOM05D007090 ORTHO05D008993 8.4e-25 118.6 310 35.5
CDE04G3442 Ceratophyllum demersum HOM05D007090 ORTHO05D008993 1.1e-24 118.2 306 34.0
CARHR248180 Cardamine hirsuta HOM05D007090 ORTHO05D008993 2.4e-24 117.1 292 33.9
ECA234G4391 Erigeron canadensis HOM05D007090 ORTHO05D008993 9.2e-24 115.2 174 43.1
BcaC04g24200 Brassica carinata HOM05D007090 ORTHO05D008993 6.0e-23 112.5 96 55.2
BolC9t52948H Brassica oleracea HOM05D007090 ORTHO05D008993 6.0e-23 112.5 96 55.2
CSS0004451 Camellia sinensis var. sinensis HOM05D007090 ORTHO05D008993 1.0e-22 111.7 175 41.1
BcaB01g02215 Brassica carinata HOM05D007090 ORTHO05D008993 2.3e-22 110.5 294 31.6
Pp3c13_5390 Physcomitrium patens HOM05D007090 ORTHO05D008993 1.1e-21 108.2 297 30.3
Sed0010456 Sechium edule HOM05D007090 ORTHO05D008993 2.4e-19 100.5 278 33.5
C09p00130 Brassica napus HOM05D007090 ORTHO05D008993 1.3e-17 94.7 299 30.4
BraA09t35687Z Brassica rapa HOM05D007090 ORTHO05D008993 1.3e-17 94.7 299 30.4
A09p00730 Brassica napus HOM05D007090 ORTHO05D008993 2.9e-17 93.6 299 30.8
Gohir.A11G078900 Gossypium hirsutum HOM05D007090 ORTHO05D008993 2.4e-16 90.5 255 33.7
Cpa.g.sc49.155 Carica papaya HOM05D007090 ORTHO05D008993 1.2e-15 88.2 58 62.1
SEGI_04858 Sequoiadendron giganteum HOM05D007090 ORTHO05D008993 6.2e-12 75.9 58 55.2
CBR_g23736 Chara braunii HOM05D007090 ORTHO05D008993 1.1e-08 65.1 256 27.0
Actinidia12185 Actinidia chinensis HOM05D007090 ORTHO05D008993 1.4e-08 64.7 117 40.2
Mapoly0035s0135 Marchantia polymorpha HOM05D007090 ORTHO05D008993 3.2e-08 63.5 87 36.8
Lj7P535T24 Lonicera japonica HOM05D007090 ORTHO05D008993 9.3e-08 62.0 89 48.3
Zm00001eb427420 Zea mays HOM05D007090 ORTHO05D008993 7.9e-07 58.9 173 36.4


User provided reference genes

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