Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000859g0190 Nicotiana tabacum HOM05D006638 ORTHO05D008246 1.4e-116 422.9 216 100.0
Nitab4.5_0011151g0010 Nicotiana tabacum HOM05D006638 ORTHO05D008246 1.5e-110 402.9 219 95.9
PGSC0003DMG400025975 Solanum tuberosum HOM05D006638 ORTHO05D008246 2.7e-99 365.5 225 84.9
Sopen01g036620 Solanum pennellii HOM05D006638 ORTHO05D008246 1.4e-98 363.2 225 85.3
Solyc01g090880.3 Solanum lycopersicum HOM05D006638 ORTHO05D008246 5.2e-98 361.3 225 85.3
CAN.G1872.5 Capsicum annuum HOM05D006638 ORTHO05D008246 1.2e-91 340.1 205 85.9
Peaxi162Scf00803g00218 Petunia axillaris HOM05D006638 ORTHO05D008246 1.6e-86 323.2 218 78.9
Dinv44116 Davidia involucrata HOM05D006638 ORTHO05D008246 4.4e-73 278.5 181 74.6
Nn2g12739 Nelumbo nucifera HOM05D006638 ORTHO05D008246 4.4e-73 278.5 208 65.9
Hma1.2p1_0001F.1_g001240 Hydrangea macrophylla HOM05D006638 ORTHO05D008246 7.5e-73 277.7 213 66.2
Rhsim05G0215700 Rhododendron simsii HOM05D006638 ORTHO05D008246 1.3e-72 276.9 179 76.5
Atru.BG.68.p Acer truncatum HOM05D006638 ORTHO05D008246 3.2e-71 272.3 175 78.3
Haze_02520 Corylus avellana HOM05D006638 ORTHO05D008246 3.2e-71 272.3 208 64.9
FvH4_7g11040 Fragaria vesca HOM05D006638 ORTHO05D008246 4.1e-71 271.9 192 70.3
FAN06G4764 Fragaria x ananassa HOM05D006638 ORTHO05D008246 4.1e-71 271.9 192 70.3
FAN03G2254 Fragaria x ananassa HOM05D006638 ORTHO05D008246 9.2e-71 270.8 192 70.3
Prupe.2G137100 Prunus persica HOM05D006638 ORTHO05D008246 9.2e-71 270.8 180 73.9
Atru.chr5.234 Acer truncatum HOM05D006638 ORTHO05D008246 1.2e-70 270.4 184 75.0
Lj7A537T49 Lonicera japonica HOM05D006638 ORTHO05D008246 1.2e-70 270.4 228 64.9
QL04p037061 Quercus lobata HOM05D006638 ORTHO05D008246 1.2e-70 270.4 214 63.6
FAN10G2039 Fragaria x ananassa HOM05D006638 ORTHO05D008246 2.0e-70 269.6 192 69.8
TAR636G0703 Trochodendron aralioides HOM05D006638 ORTHO05D008246 2.0e-70 269.6 193 69.9
FAN10G1288 Fragaria x ananassa HOM05D006638 ORTHO05D008246 2.7e-70 269.2 192 69.8
Lalb_Chr07g0190301 Lupinus albus HOM05D006638 ORTHO05D008246 2.7e-70 269.2 192 70.3
RcHm_v2.0_Chr1g0349031 Rosa chinensis HOM05D006638 ORTHO05D008246 2.7e-70 269.2 192 69.3
Glyma.03G033200 Glycine max HOM05D006638 ORTHO05D008246 5.9e-70 268.1 192 69.8
Lj3g0022109 Lotus japonicus HOM05D006638 ORTHO05D008246 1.0e-69 267.3 193 67.9
Aqoxy7G00747 Aquilegia oxysepala HOM05D006638 ORTHO05D008246 1.7e-69 266.5 220 61.4
COL.COLO4_12484 Corchorus olitorius HOM05D006638 ORTHO05D008246 3.0e-69 265.8 192 68.8
DCAR_029874 Daucus carota HOM05D006638 ORTHO05D008246 3.0e-69 265.8 188 71.8
PSO170G5140 Papaver somniferum HOM05D006638 ORTHO05D008246 3.0e-69 265.8 209 65.1
GSVIVG01018156001 Vitis vinifera HOM05D006638 ORTHO05D008246 3.0e-69 265.8 201 66.2
arahy.Tifrunner.gnm1.ann1.WQW1G6 Arachis hypogaea HOM05D006638 ORTHO05D008246 3.9e-69 265.4 184 71.7
CiPaw.14G025400 Carya illinoinensis HOM05D006638 ORTHO05D008246 3.9e-69 265.4 192 68.8
Ca_19858_v3 Cicer arietinum L. HOM05D006638 ORTHO05D008246 1.1e-68 263.8 188 69.1
Migut.N01611 Erythranthe guttata HOM05D006638 ORTHO05D008246 1.1e-68 263.8 201 69.7
MD07G1114500 Malus domestica HOM05D006638 ORTHO05D008246 1.1e-68 263.8 192 68.8
Cc02_g24450 Coffea canephora HOM05D006638 ORTHO05D008246 1.9e-68 263.1 177 78.0
HanXRQChr12g0384211 Helianthus annuus HOM05D006638 ORTHO05D008246 2.5e-68 262.7 177 71.8
Psat0s3685g0120 Pisum sativum HOM05D006638 ORTHO05D008246 2.5e-68 262.7 189 69.3
Sabra01G0171300 Salix brachista HOM05D006638 ORTHO05D008246 4.3e-68 261.9 176 74.4
ECA234G0121 Erigeron canadensis HOM05D006638 ORTHO05D008246 5.6e-68 261.5 177 71.8
Lsat_1_v5_gn_4_45501 Lactuca sativa HOM05D006638 ORTHO05D008246 5.6e-68 261.5 206 68.0
Cpa.g.sc49.148 Carica papaya HOM05D006638 ORTHO05D008246 1.2e-67 260.4 175 72.6
arahy.Tifrunner.gnm1.ann1.B645Y9 Arachis hypogaea HOM05D006638 ORTHO05D008246 1.6e-67 260.0 225 62.2
EL10Ac1g00836 Beta vulgaris HOM05D006638 ORTHO05D008246 1.6e-67 260.0 172 74.4
Potri.004G225600 Populus trichocarpa HOM05D006638 ORTHO05D008246 2.1e-67 259.6 176 73.9
MSTRG.4914 Avicennia marina HOM05D006638 ORTHO05D008246 2.8e-67 259.2 184 71.2
CANSAT56G0739 Cannabis sativa HOM05D006638 ORTHO05D008246 2.8e-67 259.2 199 65.8
SGA_v2.0_scaffold43G16517 Striga asiatica HOM05D006638 ORTHO05D008246 2.8e-67 259.2 184 70.1
Eucgr.H00160 Eucalyptus grandis HOM05D006638 ORTHO05D008246 8.0e-67 257.7 170 75.9
Thecc.01G384300 Theobroma cacao HOM05D006638 ORTHO05D008246 1.0e-66 257.3 184 69.0
Medtr4g027430 Medicago truncatula HOM05D006638 ORTHO05D008246 1.4e-66 256.9 188 68.6
TWI23G0519 Tripterygium wilfordii HOM05D006638 ORTHO05D008246 1.4e-66 256.9 177 73.4
SalBow1G6174 Salvia bowleyana HOM05D006638 ORTHO05D008246 4.0e-66 255.4 175 74.3
Ciclev10023836m.g Citrus clementina HOM05D006638 ORTHO05D008246 6.8e-66 254.6 194 67.0
CDE02G4315 Ceratophyllum demersum HOM05D000218 ORTHO05D000125 4.4e-65 251.9 185 66.5
Sc23g0003780 Simmondsia chinensis HOM05D006638 ORTHO05D008246 7.5e-65 251.1 174 72.4
BcaC07g42567 Brassica carinata HOM05D006638 ORTHO05D008246 9.8e-65 250.8 176 69.3
BraA09t41748Z Brassica rapa HOM05D006638 ORTHO05D008246 9.8e-65 250.8 176 69.3
Duzib133G1291 Durio zibethinus HOM05D006638 ORTHO05D008246 9.8e-65 250.8 192 66.1
Aa31LG1G2420 Aethionema arabicum HOM05D006638 ORTHO05D008246 6.4e-64 248.1 174 69.0
BcaC07g41715 Brassica carinata HOM05D006638 ORTHO05D008246 6.4e-64 248.1 176 68.2
CsaV3_3G007360 Cucumis sativus L. HOM05D006638 ORTHO05D008246 6.4e-64 248.1 174 70.1
Lj1g0022300 Lotus japonicus HOM05D006638 ORTHO05D008246 6.4e-64 248.1 193 65.3
ClCG05G000210 Citrullus lanatus HOM05D006638 ORTHO05D008246 1.1e-63 247.3 210 61.0
C08p47510 Brassica napus HOM05D006638 ORTHO05D008246 1.4e-63 246.9 176 68.2
Gorai.008G106400 Gossypium raimondii HOM05D006638 ORTHO05D008246 1.4e-63 246.9 177 69.5
Hund17047 Selenicereus undatus HOM05D006638 ORTHO05D008246 1.4e-63 246.9 188 67.6
unitig_748.g7114 Utricularia gibba HOM05D006638 ORTHO05D008246 5.4e-63 245.0 183 65.0
Carub.0001s1192 Capsella rubella HOM05D006638 ORTHO05D008246 7.0e-63 244.6 174 68.4
AL1G23530 Arabidopsis lyrata HOM05D006638 ORTHO05D008246 9.2e-63 244.2 214 58.9
BolC8t52292H Brassica oleracea HOM05D006638 ORTHO05D008246 9.2e-63 244.2 176 68.2
Gohir.A12G095100 Gossypium hirsutum HOM05D006638 ORTHO05D008246 9.2e-63 244.2 175 69.7
CARHR012550 Cardamine hirsuta HOM05D006638 ORTHO05D008246 2.0e-62 243.0 176 68.2
THA.LOC104809455 Tarenaya hassleriana HOM05D006638 ORTHO05D008246 2.0e-62 243.0 175 69.7
Thhalv10008640m.g Eutrema salsugineum HOM05D006638 ORTHO05D008246 3.5e-62 242.3 177 68.4
AT1G12244 Arabidopsis thaliana HOM05D006638 ORTHO05D008246 6.0e-62 241.5 174 67.2
HPP92_022319 Vanilla planifolia HOM05D006638 ORTHO05D008246 1.5e-60 236.9 173 69.4
PGR142G0596 Punica granatum HOM05D006638 ORTHO05D008246 5.6e-60 235.0 260 52.7
HPP92_022327 Vanilla planifolia HOM05D006638 ORTHO05D008246 1.6e-59 233.4 173 68.2
VMungo0331G0589 Vigna mungo HOM05D006638 ORTHO05D008246 1.6e-59 233.4 192 63.5
Actinidia33482 Actinidia chinensis HOM05D006638 ORTHO05D008246 4.9e-56 221.9 184 67.4
TAR629G0886 Trochodendron aralioides HOM05D006638 ORTHO05D008246 4.9e-56 221.9 195 60.5
Os10g0555200 Oryza sativa ssp. japonica HOM05D006638 ORTHO05D008246 9.2e-55 217.6 204 59.3
Phvul.010G071600 Phaseolus vulgaris HOM05D006638 ORTHO05D008246 3.0e-53 212.6 133 77.4
Sp1g10860 Schrenkiella parvula HOM05D006638 ORTHO05D008246 9.5e-52 207.6 176 61.9
MELO3C005958.2 Cucumis melo HOM05D006638 ORTHO05D008246 4.7e-51 205.3 292 42.8
Manes.17G011000 Manihot esculenta HOM05D006638 ORTHO05D008246 1.2e-49 200.7 134 75.4
CSS0019813 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 4.4e-49 198.7 225 52.9
CSS0044007 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 3.8e-48 195.7 186 59.1
Ah.01g003990 Amaranthus hybridus HOM05D006638 ORTHO05D008246 7.1e-47 191.4 129 76.0
TPR.G27556 Trifolium pratense HOM05D006638 ORTHO05D008246 9.2e-47 191.0 128 70.3
Zm00001eb023510 Zea mays HOM05D006638 ORTHO05D008246 4.6e-46 188.7 145 69.0
ATR0317G113 Amborella trichopoda HOM05D006638 ORTHO05D008246 1.0e-45 187.6 142 62.0
MBI04_g09497_MAGBIO Magnolia biondii HOM05D006638 ORTHO05D008246 3.0e-45 186.0 200 54.0
Sed0019776 Sechium edule HOM05D006638 ORTHO05D008246 5.1e-45 185.3 124 71.0
Gohir.D12G097700 Gossypium hirsutum HOM05D006638 ORTHO05D008246 1.1e-44 184.1 127 70.9
Oeu000021.1 Olea europaea HOM05D006638 ORTHO05D008246 9.9e-41 171.0 109 81.7
vmacro21035 Vaccinium macrocarpon HOM05D006638 ORTHO05D008246 2.2e-40 169.9 107 79.4
Hma1.2p1_0001F.1_g001250 Hydrangea macrophylla HOM05D006638 ORTHO05D008246 4.9e-40 168.7 119 73.1
AagrBONN_evm.TU.Sc2ySwM_228.3890 Anthoceros agrestis HOM05D006638 ORTHO05D008246 1.4e-39 167.2 175 52.0
CSS0006996 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 1.4e-39 167.2 107 77.6
Mapoly0010s0011 Marchantia polymorpha HOM05D006638 ORTHO05D008246 1.2e-38 164.1 176 51.7
CSS0041268 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 4.3e-36 155.6 107 74.8
Rhsim01G0151400 Rhododendron simsii HOM05D006638 ORTHO05D008246 3.1e-34 149.4 106 67.9
Pp3c1_23680 Physcomitrium patens HOM05D006638 ORTHO05D008246 9.0e-34 147.9 154 49.4
Medtr2g064690 Medicago truncatula HOM05D006638 ORTHO05D008246 8.4e-32 141.4 129 60.5
FAN01G0965 Fragaria x ananassa HOM05D006638 ORTHO05D008246 5.4e-31 138.7 97 72.2
SMO340G0150 Selaginella moellendorffii HOM05D006638 ORTHO05D008246 6.2e-27 125.2 178 42.7
TPR.G4994 Trifolium pratense HOM05D006954 ORTHO05D008246 3.5e-22 109.4 91 59.3
Pp3c1_23620 Physcomitrium patens HOM05D006638 ORTHO05D008246 1.8e-21 107.1 133 45.1
Medtr2g064700 Medicago truncatula HOM05D006638 ORTHO05D008246 3.8e-16 89.4 49 77.6
CBR_g17705 Chara braunii HOM05D006638 ORTHO05D008246 1.1e-15 87.8 115 45.2
vmacro21034 Vaccinium macrocarpon HOM05D006638 ORTHO05D008246 3.2e-15 86.3 57 64.9
Lsat_1_v5_gn_6_51920 Lactuca sativa HOM05D006638 ORTHO05D008246 7.1e-15 85.1 71 62.0
Solyc12g035620.2 Solanum lycopersicum HOM05D006638 ORTHO05D008246 2.1e-11 73.6 51 66.7
Medtr2g064670 Medicago truncatula HOM05D006638 ORTHO05D008246 2.8e-11 73.2 41 73.2
Lsat_1_v5_gn_1_125220 Lactuca sativa HOM05D006638 ORTHO05D008246 6.9e-10 68.6 62 62.9
MELO3C033920.2 Cucumis melo HOM05D006638 ORTHO05D008246 2.9e-08 63.2 101 38.6
SEGI_24864 Sequoiadendron giganteum HOM05D006638 ORTHO05D008246 1.2e-06 57.8 78 39.7


User provided reference genes

Program Settings