Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000857g0080 Nicotiana tabacum HOM05D003574 ORTHO05D012628 1.0e-70 270.0 143 100.0
Nitab4.5_0002884g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.7e-53 211.1 150 76.0
Nitab4.5_0000015g0090 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.7e-52 209.5 150 78.0
Nitab4.5_0022150g0020 Nicotiana tabacum HOM05D003574 ORTHO05D012628 4.1e-51 204.9 150 75.3
Nitab4.5_0001868g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.0e-51 204.1 150 75.3
Nitab4.5_0000161g0080 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.6e-50 203.0 150 76.0
Nitab4.5_0000004g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.3e-49 199.9 150 74.0
Nitab4.5_0001488g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.8e-49 198.4 150 74.0
Nitab4.5_0002755g0120 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.9e-48 196.1 139 79.1
Nitab4.5_0000806g0170 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.1e-47 191.0 149 71.8
Nitab4.5_0000154g0180 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.8e-46 187.6 139 76.3
Nitab4.5_0001643g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.3e-44 181.0 134 74.6
Nitab4.5_0009621g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.4e-43 179.1 134 74.6
Nitab4.5_0001924g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.6e-42 176.4 130 76.9
Nitab4.5_0002002g0090 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.5e-42 175.3 131 75.6
Nitab4.5_0000836g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.3e-41 172.6 135 72.6
Nitab4.5_0022390g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.5e-41 171.0 146 67.8
Nitab4.5_0000736g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.5e-40 169.9 142 69.0
Nitab4.5_0023019g0010 Nicotiana tabacum HOM05D003574 ORTHO05D012628 3.3e-40 168.7 126 73.0
Nitab4.5_0004356g0040 Nicotiana tabacum HOM05D003574 ORTHO05D012628 4.2e-40 168.3 142 68.3
Nitab4.5_0000716g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.2e-39 166.8 142 67.6
Nitab4.5_0000442g0120 Nicotiana tabacum HOM05D003574 ORTHO05D012628 2.8e-39 165.6 112 78.6
Nitab4.5_0000417g0050 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.7e-37 157.9 108 79.6
Nitab4.5_0001960g0100 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.8e-35 152.9 122 73.0
Nitab4.5_0001384g0140 Nicotiana tabacum HOM05D003574 ORTHO05D002175 9.2e-35 150.6 130 66.9
Nitab4.5_0000199g0130 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.6e-34 149.8 120 72.5
Nitab4.5_0010651g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.7e-34 149.1 139 65.5
Nitab4.5_0000141g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.3e-33 146.0 125 68.8
PGSC0003DMG400008626 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.9e-32 142.9 149 50.3
Nitab4.5_0004998g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.6e-32 141.4 117 70.9
Nitab4.5_0000239g0140 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.1e-31 139.4 149 59.7
Sopen02g001430 Solanum pennellii HOM05D003574 ORTHO05D002175 3.6e-31 138.7 144 52.1
Solyc10g055685.1 Solanum lycopersicum HOM05D003574 ORTHO05D002175 1.0e-30 137.1 141 52.5
Sopen03g014810 Solanum pennellii HOM05D003574 ORTHO05D002175 1.4e-30 136.7 144 50.7
PGSC0003DMG400023952 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.4e-30 136.7 149 49.0
Nitab4.5_0001512g0100 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.3e-30 136.0 82 81.7
Sopen05g008570 Solanum pennellii HOM05D003574 ORTHO05D002175 2.3e-30 136.0 144 50.7
Sopen05g013400 Solanum pennellii HOM05D000424 ORTHO05D000355 1.3e-28 130.2 141 49.6
Nitab4.5_0000160g0070 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.2e-28 129.4 84 81.0
Solyc05g150133.1 Solanum lycopersicum HOM05D003574 ORTHO05D002175 2.2e-28 129.4 144 50.0
Nitab4.5_0000472g0250 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.9e-28 129.0 110 71.8
Nitab4.5_0001179g0140 Nicotiana tabacum HOM05D003574 ORTHO05D000638 2.4e-27 125.9 104 71.2
Nitab4.5_0005115g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.2e-27 125.6 114 69.3
Nitab4.5_0003569g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.0e-26 122.9 144 54.2
Nitab4.5_0006253g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.6e-26 121.7 118 63.6
PGSC0003DMG400018974 Solanum tuberosum HOM05D000995 ORTHO05D001773 3.9e-25 118.6 115 53.0
Nitab4.5_0004669g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.9e-24 116.3 95 72.6
Nitab4.5_0013975g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.3e-24 115.2 99 70.7
Nitab4.5_0003015g0070 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.6e-24 114.8 67 83.6
Nitab4.5_0001583g0070 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.3e-24 114.4 95 72.6
Nitab4.5_0000679g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.6e-23 113.2 95 72.6
Nitab4.5_0000115g0160 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.8e-23 112.5 95 71.6
Nitab4.5_0007225g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.8e-23 112.5 87 77.0
Nitab4.5_0000903g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.7e-20 103.2 95 68.4
Nitab4.5_0004446g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.6e-18 96.7 150 46.0
PGSC0003DMG400045633 Solanum tuberosum HOM05D003574 ORTHO05D002175 2.3e-17 92.8 75 53.3
Nitab4.5_0006582g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.6e-17 91.3 81 60.5
PGSC0003DMG400001088 Solanum tuberosum HOM05D003574 ORTHO05D002175 4.0e-14 82.0 95 53.7
Nitab4.5_0000065g0250 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.2e-14 81.6 53 77.4
PGSC0003DMG400013727 Solanum tuberosum HOM05D003574 ORTHO05D002175 6.8e-14 81.3 95 53.7
PGSC0003DMG400039961 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.2e-13 80.5 95 52.6
PGSC0003DMG400030157 Solanum tuberosum HOM05D003574 ORTHO05D002175 7.5e-13 77.8 69 47.8
Nitab4.5_0000006g0070 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.3e-12 77.0 69 68.1
PGSC0003DMG400044250 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.3e-12 77.0 91 52.7
Nitab4.5_0004570g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.9e-12 75.9 140 35.0
Nitab4.5_0003579g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.9e-12 75.1 67 65.7
Nitab4.5_0005402g0070 Nicotiana tabacum HOM05D003574 ORTHO05D002175 8.3e-12 74.3 92 57.6
Nitab4.5_0000142g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.4e-11 73.6 67 71.6
Nitab4.5_0000621g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.9e-11 73.2 75 62.7
Nitab4.5_0003015g0060 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.2e-11 72.4 65 70.8
Nitab4.5_0010853g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.4e-11 71.6 140 35.0
Nitab4.5_0001168g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.1e-11 71.2 102 42.2
Nitab4.5_0003811g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.2e-11 70.9 140 37.1
Nitab4.5_0003040g0150 Nicotiana tabacum HOM05D003911 ORTHO05D012628 1.2e-10 70.5 140 34.3
Nitab4.5_0000230g0120 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.6e-10 70.1 75 62.7
Nitab4.5_0000043g0350 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.1e-10 69.7 132 37.9
Nitab4.5_0000002g0570 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.7e-10 69.3 140 35.0
Nitab4.5_0001361g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.7e-10 69.3 138 37.7
Nitab4.5_0006161g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.7e-10 69.3 136 36.8
Nitab4.5_0009406g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.7e-10 69.3 129 41.9
CAN.G126.50 Capsicum annuum HOM05D003911 ORTHO05D002175 4.6e-10 68.6 137 38.0
Nitab4.5_0000003g0310 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.6e-10 68.6 135 37.0
Nitab4.5_0003551g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.6e-10 68.6 100 43.0
Nitab4.5_0003598g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.6e-10 68.6 136 35.3
Nitab4.5_0000639g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.8e-10 67.8 141 34.0
Nitab4.5_0001204g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.8e-10 67.8 138 34.8
Nitab4.5_0008086g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.8e-10 67.8 117 41.0
Nitab4.5_0004332g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.0e-09 67.4 140 32.9
Nitab4.5_0000297g0230 Nicotiana tabacum HOM05D003911 ORTHO05D012628 1.3e-09 67.0 90 41.1
Nitab4.5_0013726g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.3e-09 67.0 139 36.0
Sopen09g011440 Solanum pennellii HOM05D003911 ORTHO05D002175 1.3e-09 67.0 87 41.4
Nitab4.5_0000005g0430 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.7e-09 66.6 102 40.2
Nitab4.5_0009292g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.7e-09 66.6 93 45.2
SGA_v2.0_scaffold111G31464 Striga asiatica HOM05D013482 ORTHO05D012628 1.7e-09 66.6 140 27.9
SGA_v2.0_scaffold111G31465 Striga asiatica HOM05D013482 ORTHO05D012628 1.7e-09 66.6 140 27.9
SGA_v2.0_scaffold123G33495 Striga asiatica HOM05D013482 ORTHO05D012628 1.7e-09 66.6 140 27.9
SGA_v2.0_scaffold229G43308 Striga asiatica HOM05D013482 ORTHO05D012628 1.7e-09 66.6 140 27.9
SGA_v2.0_scaffold229G43309 Striga asiatica HOM05D013482 ORTHO05D012628 1.7e-09 66.6 140 27.9
SGA_v2.0_scaffold27G11687 Striga asiatica HOM05D013482 ORTHO05D012628 1.7e-09 66.6 140 27.9
CAN.G267.2 Capsicum annuum HOM05D003911 ORTHO05D002175 3.0e-09 65.9 137 38.0
Nitab4.5_0000115g0150 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.0e-09 65.9 39 76.9
Nitab4.5_0008324g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.0e-09 65.9 126 40.5
Nitab4.5_0000205g0130 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.9e-09 65.5 137 34.3
Nitab4.5_0001502g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.9e-09 65.5 127 37.0
Nitab4.5_0002393g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.1e-09 65.1 140 33.6
SGA_v2.0_scaffold38G15091 Striga asiatica HOM05D013482 ORTHO05D012628 5.1e-09 65.1 140 27.1
Nitab4.5_0000989g0060 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.6e-09 64.3 127 38.6
Nitab4.5_0003139g0120 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.6e-09 64.3 110 41.8
Nitab4.5_0000002g0380 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.1e-08 63.9 100 39.0
Nitab4.5_0014328g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.1e-08 63.9 102 42.2
Nitab4.5_0001772g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.5e-08 63.5 107 38.3
Nitab4.5_0000378g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.9e-08 63.2 132 35.6
Nitab4.5_0002690g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.9e-08 63.2 102 39.2
Nitab4.5_0003295g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.9e-08 63.2 74 56.8
Nitab4.5_0004708g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.5e-08 62.8 135 38.5
PGSC0003DMG400043763 Solanum tuberosum HOM05D003574 ORTHO05D002175 2.5e-08 62.8 87 47.1
Nitab4.5_0000142g0450 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.3e-08 62.4 132 38.6
Nitab4.5_0000448g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.3e-08 62.4 130 35.4
Nitab4.5_0000679g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.3e-08 62.4 41 65.9
Nitab4.5_0000051g0150 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.6e-08 61.6 137 35.0
Nitab4.5_0002700g0210 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.6e-08 61.6 131 39.7
Nitab4.5_0001371g0050 Nicotiana tabacum HOM05D003574 ORTHO05D002175 9.5e-08 60.8 58 67.2
Nitab4.5_0006582g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.2e-07 60.5 60 65.0
Nitab4.5_0000903g0140 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.1e-07 59.7 32 81.2
Nitab4.5_0000919g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.1e-07 59.7 131 36.6
Nitab4.5_0001077g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.1e-07 59.7 123 36.6
Nitab4.5_0012205g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.1e-07 59.7 137 35.0
Nitab4.5_0013863g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.1e-07 59.7 102 39.2
CAN.G1364.7 Capsicum annuum HOM05D000163 ORTHO05D000219 3.6e-07 58.9 131 34.4
CAN.G138.18 Capsicum annuum HOM05D003911 ORTHO05D002175 3.6e-07 58.9 120 36.7
Nitab4.5_0001800g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.7e-07 58.5 100 40.0
Nitab4.5_0003019g0020 Nicotiana tabacum HOM05D003911 ORTHO05D012628 6.2e-07 58.2 129 34.9
Nitab4.5_0002897g0060 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.4e-06 57.0 136 33.8
Nitab4.5_0003185g0060 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.4e-06 57.0 79 44.3
CAN.G226.31 Capsicum annuum HOM05D003911 ORTHO05D002175 2.4e-06 56.2 88 35.2
CAN.G264.19 Capsicum annuum HOM05D003911 ORTHO05D002175 2.4e-06 56.2 117 36.8
Nitab4.5_0000262g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.4e-06 56.2 102 42.2
Nitab4.5_0000476g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.4e-06 56.2 130 34.6
Nitab4.5_0001194g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.4e-06 56.2 120 36.7
Nitab4.5_0007148g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.1e-06 55.8 132 34.1
Nitab4.5_0000936g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.2e-06 55.1 94 38.3
Nitab4.5_0000022g0170 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.8e-06 54.7 146 30.1
Nitab4.5_0000913g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.9e-06 54.3 133 35.3


User provided reference genes

Program Settings