Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000857g0060 Nicotiana tabacum HOM05D003574 ORTHO05D002175 9.7e-155 550.1 268 100.0
Nitab4.5_0000065g0250 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.2e-98 362.8 276 68.5
Nitab4.5_0003579g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.7e-96 355.9 276 67.4
Nitab4.5_0001512g0100 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.1e-95 351.7 276 67.8
Nitab4.5_0000199g0130 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.8e-92 343.2 276 67.4
Nitab4.5_0006582g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.9e-90 335.1 276 65.2
Nitab4.5_0012756g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.3e-86 322.0 247 68.8
Nitab4.5_0001384g0140 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.3e-86 321.2 276 64.5
Nitab4.5_0002002g0090 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.6e-85 320.1 269 64.7
Nitab4.5_0009621g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.1e-84 317.4 275 61.8
Nitab4.5_0022390g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.3e-84 315.1 276 60.5
Nitab4.5_0000679g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.8e-83 311.6 221 71.9
Nitab4.5_0003015g0060 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.4e-82 308.1 237 67.9
Nitab4.5_0000115g0150 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.9e-76 288.1 264 62.1
Nitab4.5_0000004g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.5e-75 287.0 269 58.4
Nitab4.5_0001868g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.4e-74 281.6 275 56.7
Nitab4.5_0004998g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.6e-72 275.4 247 61.1
Nitab4.5_0000160g0070 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.3e-71 273.9 305 53.8
Nitab4.5_0000903g0140 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.4e-68 263.1 183 74.3
Nitab4.5_0000348g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.4e-67 259.2 216 64.8
Nitab4.5_0000154g0180 Nicotiana tabacum HOM05D003574 ORTHO05D002175 8.4e-66 254.6 260 56.5
Nitab4.5_0001742g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.7e-64 249.6 188 70.2
Nitab4.5_0010651g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.5e-64 249.2 219 63.0
Nitab4.5_0000141g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.8e-63 246.9 275 53.5
Nitab4.5_0000161g0080 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.8e-61 239.6 213 62.4
Nitab4.5_0005402g0070 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.1e-60 237.7 180 71.1
Nitab4.5_0003015g0070 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.9e-59 231.9 243 54.7
Nitab4.5_0000512g0140 Nicotiana tabacum HOM05D003574 ORTHO05D002175 9.4e-57 224.6 168 69.6
Nitab4.5_0000053g0080 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.2e-53 213.4 216 56.9
Nitab4.5_0000015g0080 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.7e-53 212.6 176 63.6
Nitab4.5_0001488g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.6e-48 197.2 276 44.2
Nitab4.5_0000239g0140 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.8e-47 193.7 142 73.2
Nitab4.5_0003295g0050 Nicotiana tabacum HOM05D003574 ORTHO05D002175 8.8e-47 191.4 128 78.1
Nitab4.5_0022150g0020 Nicotiana tabacum HOM05D003574 ORTHO05D012628 1.1e-46 191.0 188 56.4
Nitab4.5_0005762g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.8e-45 186.4 139 72.7
PGSC0003DMG400031332 Solanum tuberosum HOM05D000995 ORTHO05D001773 3.7e-45 186.0 276 41.7
PGSC0003DMG400043951 Solanum tuberosum HOM05D003574 ORTHO05D002175 4.1e-44 182.6 276 42.0
Nitab4.5_0007583g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.2e-43 181.0 163 59.5
PGSC0003DMG400045633 Solanum tuberosum HOM05D003574 ORTHO05D002175 4.5e-43 179.1 283 40.6
Nitab4.5_0020094g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.9e-42 176.4 137 67.2
Solyc10g055685.1 Solanum lycopersicum HOM05D003574 ORTHO05D002175 3.8e-42 176.0 278 41.0
Sopen05g008570 Solanum pennellii HOM05D003574 ORTHO05D002175 3.8e-42 176.0 278 42.1
Nitab4.5_0000417g0050 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.0e-42 175.6 233 47.2
Nitab4.5_0001250g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.5e-42 175.3 154 61.0
Nitab4.5_0002755g0120 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.2e-41 172.9 278 42.1
Nitab4.5_0002206g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 9.4e-41 171.4 156 58.3
Nitab4.5_0000442g0120 Nicotiana tabacum HOM05D003574 ORTHO05D012628 1.2e-40 171.0 188 54.3
Nitab4.5_0001960g0100 Nicotiana tabacum HOM05D003574 ORTHO05D002175 8.8e-39 164.9 160 56.2
Nitab4.5_0026749g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.1e-38 164.5 147 59.2
Nitab4.5_0004446g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.3e-38 162.9 271 42.1
Nitab4.5_0001643g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.7e-37 160.6 145 57.9
Nitab4.5_0013975g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.8e-37 159.8 252 40.9
Nitab4.5_0000032g0310 Nicotiana tabacum HOM05D003574 ORTHO05D001773 6.3e-37 158.7 144 59.0
PGSC0003DMG400018974 Solanum tuberosum HOM05D000995 ORTHO05D001773 5.9e-35 152.1 248 41.1
Nitab4.5_0005115g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.3e-34 151.0 118 66.9
Nitab4.5_0002884g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.8e-34 149.4 139 59.0
Nitab4.5_0004469g0130 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.0e-34 149.1 163 52.8
Nitab4.5_0003569g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.5e-33 147.5 145 57.9
Nitab4.5_0001057g0130 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.5e-33 145.6 152 54.6
Nitab4.5_0000645g0060 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.3e-31 140.2 133 55.6
Nitab4.5_0002941g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.2e-29 133.7 93 74.2
Nitab4.5_0001247g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.4e-28 130.2 99 71.7
Nitab4.5_0000841g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.1e-28 129.8 113 62.8
Nitab4.5_0008368g0050 Nicotiana tabacum HOM05D003574 ORTHO05D001773 4.1e-28 129.4 111 59.5
Nitab4.5_0000621g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.0e-28 128.6 206 39.3
Nitab4.5_0000481g0120 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.3e-26 124.4 95 61.1
Nitab4.5_0000716g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.9e-26 123.2 187 44.9
Nitab4.5_0001924g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.0e-26 122.5 183 44.8
PGSC0003DMG400023226 Solanum tuberosum HOM05D003574 ORTHO05D002175 4.2e-25 119.4 188 41.0
Nitab4.5_0009418g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.1e-24 115.5 90 67.8
Nitab4.5_0000362g0190 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.5e-22 110.9 153 47.7
Nitab4.5_0000002g0570 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.0e-22 110.5 254 32.7
Nitab4.5_0001077g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.4e-22 109.4 247 34.0
Nitab4.5_0000667g0070 Nicotiana tabacum HOM05D003574 ORTHO05D001773 1.7e-21 107.5 123 52.0
Nitab4.5_0008600g0040 Nicotiana tabacum HOM05D003574 ORTHO05D010997 1.1e-20 104.8 106 54.7
Nitab4.5_0002538g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.4e-20 104.4 230 33.9
PGSC0003DMG400043149 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.8e-20 104.0 145 38.6
Nitab4.5_0001599g0160 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.7e-19 100.1 210 33.3
Nitab4.5_0000101g0410 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.0e-18 98.2 281 30.6
PGSC0003DMG400030157 Solanum tuberosum HOM05D003574 ORTHO05D002175 2.9e-18 96.7 145 44.8
Nitab4.5_0001115g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.6e-18 95.5 233 33.5
PGSC0003DMG400036224 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.1e-17 94.7 87 51.7
Nitab4.5_0007148g0080 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.2e-17 92.8 97 52.6
Nitab4.5_0005092g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.1e-16 90.5 248 31.5
Nitab4.5_0001859g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.8e-16 90.1 128 37.5
Nitab4.5_0009406g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.7e-16 89.4 128 39.1
Nitab4.5_0000005g0430 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.4e-15 87.8 124 37.1
Nitab4.5_0014328g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.4e-15 87.8 130 37.7
Sopen03g026790 Solanum pennellii HOM05D003574 ORTHO05D002175 1.8e-15 87.4 120 45.0
Nitab4.5_0002999g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.2e-15 85.9 137 35.0
Nitab4.5_0003040g0150 Nicotiana tabacum HOM05D003911 ORTHO05D012628 1.2e-14 84.7 214 33.6
Sopen03g014810 Solanum pennellii HOM05D003574 ORTHO05D002175 1.2e-14 84.7 149 42.3
Nitab4.5_0003811g0130 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.0e-14 84.0 142 37.3
Nitab4.5_0000491g0150 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.4e-14 83.2 93 43.0
Nitab4.5_0001371g0050 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.7e-13 80.9 53 73.6
Nitab4.5_0002690g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.7e-13 80.9 90 43.3
PGSC0003DMG400023952 Solanum tuberosum HOM05D003574 ORTHO05D002175 2.2e-13 80.5 139 40.3
Sopen12g018970 Solanum pennellii HOM05D003574 ORTHO05D002175 1.4e-12 77.8 244 29.1
Nitab4.5_0004332g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.8e-12 77.4 219 31.1
Nitab4.5_0000378g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.2e-12 76.6 90 44.4
PGSC0003DMG400013728 Solanum tuberosum HOM05D000995 ORTHO05D001773 3.2e-12 76.6 97 41.2
Nitab4.5_0001168g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.4e-12 75.9 277 28.2
Nitab4.5_0000022g0180 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.0e-12 75.5 86 43.0
Nitab4.5_0003411g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.7e-11 73.6 106 44.3
Nitab4.5_0010853g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.9e-11 72.4 184 34.2
Nitab4.5_0004620g0070 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.3e-10 70.5 77 45.5
Nitab4.5_0002999g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.0e-10 69.3 249 28.1
Nitab4.5_0006058g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.0e-10 69.3 111 37.8
Nitab4.5_0003185g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.5e-09 67.8 129 31.8
SalBow2G3402 Salvia bowleyana HOM05D000995 ORTHO05D001773 1.9e-09 67.4 88 36.4
Nitab4.5_0002393g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.5e-09 67.0 173 32.4
SalBow8G2838 Salvia bowleyana HOM05D000995 ORTHO05D001773 5.6e-09 65.9 192 26.0
Nitab4.5_0007225g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.3e-09 65.5 38 76.3
Nitab4.5_0002311g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.5e-09 65.1 84 39.3
Nitab4.5_0003019g0020 Nicotiana tabacum HOM05D003911 ORTHO05D012628 9.5e-09 65.1 164 32.9
SalBow6G5430 Salvia bowleyana HOM05D000995 ORTHO05D001773 9.5e-09 65.1 88 35.2
Nitab4.5_0004998g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.6e-08 64.3 41 78.0
Nitab4.5_0013377g0010 Nicotiana tabacum HOM05D003574 ORTHO05D010997 2.1e-08 63.9 53 60.4
Hma1.2p1_1193F.1_g265550 Hydrangea macrophylla HOM05D000995 ORTHO05D001773 2.8e-08 63.5 119 34.5
Nitab4.5_0000059g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.8e-08 63.5 232 28.4
Actinidia27557 Actinidia chinensis HOM05D021049 ORTHO05D001773 3.6e-08 63.2 89 38.2
MSTRG.26889 Avicennia marina HOM05D000995 ORTHO05D001773 4.7e-08 62.8 62 48.4
COL.COLO4_20284 Corchorus olitorius HOM05D004781 ORTHO05D001773 8.0e-08 62.0 269 24.5
Sopen02g001430 Solanum pennellii HOM05D003574 ORTHO05D002175 8.0e-08 62.0 146 32.9
FAN03G0592 Fragaria x ananassa HOM05D000995 ORTHO05D002620 1.4e-07 61.2 111 30.6
FAN26G1666 Fragaria x ananassa HOM05D000995 ORTHO05D002620 1.8e-07 60.8 84 34.5
Sed0013325 Sechium edule HOM05D000995 ORTHO05D001773 1.8e-07 60.8 89 37.1
FAN03G0692 Fragaria x ananassa HOM05D000995 ORTHO05D002620 2.3e-07 60.5 111 30.6
Hma1.2p1_2783F.1_g328410 Hydrangea macrophylla HOM05D000995 ORTHO05D001773 3.1e-07 60.1 119 33.6
Nitab4.5_0003551g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.1e-07 60.1 130 29.2
Nitab4.5_0004998g0050 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.2e-07 59.3 57 50.9
FAN15G3269 Fragaria x ananassa HOM05D000995 ORTHO05D002620 6.8e-07 58.9 99 32.3
FAN15G3418 Fragaria x ananassa HOM05D000995 ORTHO05D002620 6.8e-07 58.9 84 34.5
FAN28G2204 Fragaria x ananassa HOM05D000995 ORTHO05D002620 6.8e-07 58.9 128 28.9
COL.COLO4_20277 Corchorus olitorius HOM05D014876 ORTHO05D012510 8.9e-07 58.5 201 24.4
FAN15G2254 Fragaria x ananassa HOM05D000995 ORTHO05D002620 8.9e-07 58.5 80 36.2
PGSC0003DMG400040325 Solanum tuberosum HOM05D000995 ORTHO05D001773 8.9e-07 58.5 74 37.8
FAN05G2505 Fragaria x ananassa HOM05D000995 ORTHO05D002620 1.2e-06 58.2 127 28.3
vmacro23270 Vaccinium macrocarpon HOM05D000991 ORTHO05D000848 1.2e-06 58.2 197 27.4
COL.COLO4_21422 Corchorus olitorius HOM05D016252 ORTHO05D001773 1.5e-06 57.8 104 34.6
COL.COLO4_29985 Corchorus olitorius HOM05D014876 ORTHO05D012510 1.5e-06 57.8 228 22.8
FAN02G1269 Fragaria x ananassa HOM05D000995 ORTHO05D002620 1.5e-06 57.8 205 25.4
FAN02G3797 Fragaria x ananassa HOM05D000995 ORTHO05D002620 1.5e-06 57.8 205 25.4
FAN03G1518 Fragaria x ananassa HOM05D000995 ORTHO05D002620 1.5e-06 57.8 84 34.5
FAN25G3247 Fragaria x ananassa HOM05D000995 ORTHO05D002620 1.5e-06 57.8 84 34.5
FAN08G0741 Fragaria x ananassa HOM05D000995 ORTHO05D002620 2.0e-06 57.4 176 25.0
FAN26G1105 Fragaria x ananassa HOM05D000995 ORTHO05D002620 2.6e-06 57.0 241 26.6
Hma1.2p1_0054F.1_g031030 Hydrangea macrophylla HOM05D004781 ORTHO05D001773 2.6e-06 57.0 91 33.0
Hma1.2p1_0120F.1_g057263 Hydrangea macrophylla HOM05D000995 ORTHO05D001773 2.6e-06 57.0 91 33.0
Hma1.2p1_0663F.1_g198890 Hydrangea macrophylla HOM05D000995 ORTHO05D001773 2.6e-06 57.0 91 33.0
Sed0019125 Sechium edule HOM05D000995 ORTHO05D001773 2.6e-06 57.0 89 36.0
Dinv12862 Davidia involucrata HOM05D008376 ORTHO05D010591 3.4e-06 56.6 84 34.5
FAN07G1407 Fragaria x ananassa HOM05D000995 ORTHO05D002620 3.4e-06 56.6 84 34.5
FAN16G0241 Fragaria x ananassa HOM05D000995 ORTHO05D002620 3.4e-06 56.6 84 33.3
Nitab4.5_0000079g0320 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.4e-06 56.6 73 46.6
Nitab4.5_0000687g0080 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.4e-06 56.6 54 51.9
Nitab4.5_0007170g0060 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.4e-06 56.6 126 29.4
COL.COLO4_10628 Corchorus olitorius HOM05D014876 ORTHO05D001773 4.4e-06 56.2 244 22.1
Dinv36130 Davidia involucrata HOM05D008376 ORTHO05D010591 4.4e-06 56.2 84 34.5
FAN16G2151 Fragaria x ananassa HOM05D000995 ORTHO05D002620 4.4e-06 56.2 81 32.1
Hma1.2p1_0494F.1_g165370 Hydrangea macrophylla HOM05D000995 ORTHO05D001773 4.4e-06 56.2 91 33.0
Nitab4.5_0001179g0140 Nicotiana tabacum HOM05D003574 ORTHO05D000638 4.4e-06 56.2 36 69.4
Nitab4.5_0001772g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.4e-06 56.2 244 26.2
COL.COLO4_14897 Corchorus olitorius HOM05D014876 ORTHO05D001773 5.8e-06 55.8 178 23.6
FAN23G3071 Fragaria x ananassa HOM05D000995 ORTHO05D002620 5.8e-06 55.8 99 32.3
FAN26G0419 Fragaria x ananassa HOM05D000995 ORTHO05D002620 7.5e-06 55.5 108 29.6
Nitab4.5_0000142g0460 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.5e-06 55.5 67 37.3
Nitab4.5_0001599g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.5e-06 55.5 78 38.5
Rhsim02G0072700 Rhododendron simsii HOM05D000995 ORTHO05D001773 7.5e-06 55.5 86 32.6
COL.COLO4_14896 Corchorus olitorius HOM05D014876 ORTHO05D012510 9.8e-06 55.1 230 23.5
FAN05G4129 Fragaria x ananassa HOM05D000995 ORTHO05D002620 9.8e-06 55.1 111 27.9
Nitab4.5_0001194g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.8e-06 55.1 157 28.0


User provided reference genes

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