Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000856g0150 Nicotiana tabacum HOM05D006219 ORTHO05D007562 5.7e-240 833.9 455 100.0
Nitab4.5_0010345g0010 Nicotiana tabacum HOM05D006219 ORTHO05D007562 4.3e-227 791.2 455 94.9
PGSC0003DMG400028668 Solanum tuberosum HOM05D006219 ORTHO05D007562 3.6e-194 681.8 452 76.3
Sopen11g002000 Solanum pennellii HOM05D006219 ORTHO05D007562 2.4e-193 679.1 452 76.1
Solyc11g006060.2 Solanum lycopersicum HOM05D006219 ORTHO05D007562 2.1e-189 666.0 442 76.0
Peaxi162Scf00120g00021 Petunia axillaris HOM05D006219 ORTHO05D007562 1.1e-185 653.7 458 76.2
CAN.G582.15 Capsicum annuum HOM05D006219 ORTHO05D007562 2.4e-185 652.5 454 73.6
Lj2C39T18 Lonicera japonica HOM05D006219 ORTHO05D007562 8.8e-132 474.6 455 54.7
Oeu029038.1 Olea europaea HOM05D006219 ORTHO05D007562 2.4e-129 466.5 449 55.2
CSS0036761 Camellia sinensis var. sinensis HOM05D006219 ORTHO05D007562 1.2e-128 464.2 457 58.0
Lsat_1_v5_gn_2_107721 Lactuca sativa HOM05D006219 ORTHO05D007562 1.1e-126 457.6 463 54.4
SalBow3G3408 Salvia bowleyana HOM05D006219 ORTHO05D007562 5.5e-126 455.3 460 55.7
Dinv06988 Davidia involucrata HOM05D006219 ORTHO05D007562 4.7e-125 452.2 445 58.2
QL08p015782 Quercus lobata HOM05D006219 ORTHO05D007562 1.2e-123 447.6 459 55.3
Cpa.g.sc162.24 Carica papaya HOM05D006219 ORTHO05D007562 2.0e-123 446.8 465 53.3
QL03p031869 Quercus lobata HOM05D006219 ORTHO05D007562 2.6e-123 446.4 459 55.3
MD12G1245900 Malus domestica HOM05D006219 ORTHO05D007562 9.8e-123 444.5 466 53.6
Cfa006329 Carpinus fangiana HOM05D006219 ORTHO05D007562 1.3e-122 444.1 462 53.5
Duzib128G1627 Durio zibethinus HOM05D006219 ORTHO05D007562 6.3e-122 441.8 384 58.9
FAN05G4153 Fragaria x ananassa HOM05D006219 ORTHO05D007562 1.4e-121 440.7 466 52.1
Manes.09G149100 Manihot esculenta HOM05D006219 ORTHO05D007562 1.4e-121 440.7 466 53.6
CiPaw.07G078300 Carya illinoinensis HOM05D006219 ORTHO05D007562 2.4e-121 439.9 460 53.3
FAN02G1274 Fragaria x ananassa HOM05D006219 ORTHO05D007562 7.0e-121 438.3 467 52.2
Prupe.6G348600 Prunus persica HOM05D006219 ORTHO05D007562 7.0e-121 438.3 474 50.0
HanXRQChr14g0458931 Helianthus annuus HOM05D006219 ORTHO05D007562 1.2e-120 437.6 475 51.8
Thecc.05G275300 Theobroma cacao HOM05D006219 ORTHO05D007562 1.2e-120 437.6 384 58.1
Atru.chr2.897 Acer truncatum HOM05D006219 ORTHO05D007562 1.6e-120 437.2 460 53.9
FAN05G2712 Fragaria x ananassa HOM05D006219 ORTHO05D007562 1.6e-120 437.2 466 51.9
FvH4_6g02280 Fragaria vesca HOM05D006219 ORTHO05D007562 5.9e-120 435.3 472 51.1
FAN09G4845 Fragaria x ananassa HOM05D006219 ORTHO05D007562 1.7e-119 433.7 386 57.3
Potri.013G044900 Populus trichocarpa HOM05D006219 ORTHO05D007562 3.8e-119 432.6 383 57.4
Rhsim05G0175300 Rhododendron simsii HOM05D006219 ORTHO05D007562 5.0e-119 432.2 460 53.5
Gorai.013G120100 Gossypium raimondii HOM05D006219 ORTHO05D007562 1.1e-118 431.0 457 51.6
Gohir.A13G103800 Gossypium hirsutum HOM05D006219 ORTHO05D007562 2.5e-118 429.9 457 51.4
Gohir.D13G107000 Gossypium hirsutum HOM05D006219 ORTHO05D007562 2.5e-118 429.9 457 51.9
Lalb_Chr06g0168341 Lupinus albus HOM05D006219 ORTHO05D007562 5.5e-118 428.7 383 57.2
Sc06g0004060 Simmondsia chinensis HOM05D006219 ORTHO05D007562 5.5e-118 428.7 467 52.9
TWI36G0216 Tripterygium wilfordii HOM05D006219 ORTHO05D007562 5.5e-118 428.7 381 57.7
CANSAT54G2996 Cannabis sativa HOM05D006219 ORTHO05D007562 2.1e-117 426.8 458 50.7
Haze_04459 Corylus avellana HOM05D006219 ORTHO05D007562 2.1e-117 426.8 461 52.1
MELO3C024664.2 Cucumis melo HOM05D006219 ORTHO05D007562 8.0e-117 424.9 387 57.4
ECA238G2300 Erigeron canadensis HOM05D006219 ORTHO05D007562 1.0e-116 424.5 385 56.4
Sed0012882 Sechium edule HOM05D006219 ORTHO05D007562 1.0e-116 424.5 383 56.7
HanXRQChr07g0201901 Helianthus annuus HOM05D006219 ORTHO05D007562 1.8e-116 423.7 385 56.4
CsaV3_1G045560 Cucumis sativus L. HOM05D006219 ORTHO05D007562 1.2e-115 421.0 384 56.2
ClCG06G009410 Citrullus lanatus HOM05D006219 ORTHO05D007562 1.5e-115 420.6 387 56.8
DCAR_030973 Daucus carota HOM05D006219 ORTHO05D007562 1.5e-115 420.6 383 56.4
PGR004G0430 Punica granatum HOM05D006219 ORTHO05D007562 1.5e-115 420.6 449 49.4
Migut.F00810 Erythranthe guttata HOM05D006219 ORTHO05D007562 2.0e-115 420.2 465 51.6
DCAR_002178 Daucus carota HOM05D006219 ORTHO05D007562 2.6e-115 419.9 379 57.0
Sabra13G0041300 Salix brachista HOM05D006219 ORTHO05D007562 3.4e-115 419.5 468 50.0
Ca_10007_v3 Cicer arietinum L. HOM05D006219 ORTHO05D007562 1.3e-114 417.5 384 57.0
Phvul.L001763 Phaseolus vulgaris HOM05D006219 ORTHO05D007562 3.7e-114 416.0 454 51.8
Lj5g0004576 Lotus japonicus HOM05D006219 ORTHO05D007562 3.1e-113 412.9 384 56.5
Aqoxy5G00261 Aquilegia oxysepala HOM05D006219 ORTHO05D007562 7.0e-113 411.8 461 49.5
Glyma.10G166900 Glycine max HOM05D006219 ORTHO05D007562 2.0e-112 410.2 382 57.1
VMungo0720G3050 Vigna mungo HOM05D006219 ORTHO05D007562 4.5e-112 409.1 455 52.3
TAR633G0272 Trochodendron aralioides HOM05D006219 ORTHO05D007562 3.8e-111 406.0 463 49.9
unitig_748.g8683 Utricularia gibba HOM05D006219 ORTHO05D007562 1.5e-110 404.1 385 53.8
THA.LOC104799246 Tarenaya hassleriana HOM05D006219 ORTHO05D007562 4.3e-110 402.5 464 50.6
Actinidia06785 Actinidia chinensis HOM05D006219 ORTHO05D007562 8.0e-109 398.3 460 51.1
EL10Ac4g09057 Beta vulgaris HOM05D006219 ORTHO05D007562 1.4e-108 397.5 470 53.4
Medtr1g079870 Medicago truncatula HOM05D006219 ORTHO05D007562 2.0e-107 393.7 383 55.4
PSO832G3978 Papaver somniferum HOM05D006219 ORTHO05D007562 2.6e-107 393.3 383 51.7
Sp2g20170 Schrenkiella parvula HOM05D006219 ORTHO05D007562 3.4e-107 392.9 461 47.9
PSO210G1007 Papaver somniferum HOM05D006219 ORTHO05D007562 7.5e-107 391.7 383 51.7
A06p37950 Brassica napus HOM05D006219 ORTHO05D007562 4.9e-106 389.0 464 49.1
C07p40330 Brassica napus HOM05D006219 ORTHO05D007562 8.3e-106 388.3 464 48.9
BraA06t26711Z Brassica rapa HOM05D006219 ORTHO05D007562 8.3e-106 388.3 464 48.9
BcaNung02093 Brassica carinata HOM05D006219 ORTHO05D007562 1.9e-105 387.1 464 48.7
BolC7t44567H Brassica oleracea HOM05D006219 ORTHO05D007562 1.9e-105 387.1 464 48.7
Thhalv10004236m.g Eutrema salsugineum HOM05D006219 ORTHO05D007562 3.2e-105 386.3 462 48.1
BcaNung01728 Brassica carinata HOM05D006219 ORTHO05D007562 7.0e-105 385.2 458 48.3
Aa31LG5G14970 Aethionema arabicum HOM05D006219 ORTHO05D007562 1.3e-103 380.9 384 53.4
AL6G40560 Arabidopsis lyrata HOM05D006219 ORTHO05D007562 1.3e-103 380.9 385 51.9
Aa31LG11G8710 Aethionema arabicum HOM05D006219 ORTHO05D007562 3.0e-103 379.8 385 53.0
CARHR185150 Cardamine hirsuta HOM05D006219 ORTHO05D007562 3.9e-103 379.4 386 53.4
BcaB04g21366 Brassica carinata HOM05D006219 ORTHO05D007562 3.6e-101 372.9 384 51.8
AT3G04550 Arabidopsis thaliana HOM05D006219 ORTHO05D007562 6.2e-101 372.1 389 51.7
BcaC09g47795 Brassica carinata HOM05D006219 ORTHO05D007562 1.8e-100 370.5 461 46.6
Ah.06g191950 Amaranthus hybridus HOM05D006219 ORTHO05D007562 4.0e-100 369.4 382 51.8
AUR62037607 Chenopodium quinoa HOM05D006219 ORTHO05D007562 6.8e-100 368.6 363 52.6
Thhalv10020727m.g Eutrema salsugineum HOM05D006219 ORTHO05D007562 8.9e-100 368.2 463 46.4
BolC1t05743H Brassica oleracea HOM05D006219 ORTHO05D007562 5.8e-99 365.5 468 46.2
Carub.0003s0370 Capsella rubella HOM05D006219 ORTHO05D007562 5.8e-99 365.5 456 46.9
BraA01t04521Z Brassica rapa HOM05D006219 ORTHO05D007562 9.8e-99 364.8 384 50.3
A01p40850 Brassica napus HOM05D006219 ORTHO05D007562 1.1e-97 361.3 387 50.4
BNapus_Darmor_BZH_scaffold_78p00860 Brassica napus HOM05D006219 ORTHO05D007562 1.1e-97 361.3 387 50.4
Carub.0006s2578 Capsella rubella HOM05D006219 ORTHO05D007562 1.9e-97 360.5 386 50.5
RcHm_v2.0_Chr3g0450031 Rosa chinensis HOM05D006219 ORTHO05D007562 3.2e-97 359.8 334 55.7
AT5G28500 Arabidopsis thaliana HOM05D006219 ORTHO05D007562 5.4e-97 359.0 386 51.0
AL3G14570 Arabidopsis lyrata HOM05D006219 ORTHO05D007562 1.6e-96 357.5 389 50.1
FAN14G1966 Fragaria x ananassa HOM05D006219 ORTHO05D007562 3.5e-96 356.3 472 46.0
FAN14G5007 Fragaria x ananassa HOM05D006219 ORTHO05D007562 3.5e-96 356.3 472 46.0
Psat6g143080 Pisum sativum HOM05D006219 ORTHO05D007562 6.0e-96 355.5 348 54.6
vmacro20002 Vaccinium macrocarpon HOM05D006219 ORTHO05D007562 6.0e-96 355.5 347 54.5
Sp3g03390 Schrenkiella parvula HOM05D006219 ORTHO05D007562 3.9e-95 352.8 462 45.0
CARHR078740 Cardamine hirsuta HOM05D006219 ORTHO05D007562 3.3e-94 349.7 468 44.2
CDE05G0955 Ceratophyllum demersum HOM05D006219 ORTHO05D007562 1.4e-92 344.4 382 51.3
AUR62004874 Chenopodium quinoa HOM05D006219 ORTHO05D007562 3.4e-91 339.7 346 51.2
HPP92_025973 Vanilla planifolia HOM05D006219 ORTHO05D007562 3.4e-91 339.7 385 48.3
SGA_v2.0_scaffold210G42065 Striga asiatica HOM05D006219 ORTHO05D007562 3.2e-89 333.2 373 53.6
TPR.G10266 Trifolium pratense HOM05D006219 ORTHO05D007562 1.4e-84 317.8 389 48.6
CDE08G1514 Ceratophyllum demersum HOM05D006219 ORTHO05D007562 3.8e-82 309.7 358 48.3
ATR0680G103 Amborella trichopoda HOM05D006219 ORTHO05D007562 3.9e-79 299.7 384 46.4
Os10g0445600 Oryza sativa ssp. japonica HOM05D006219 ORTHO05D007562 8.7e-79 298.5 392 45.2
Nn1g02711 Nelumbo nucifera HOM05D006219 ORTHO05D007562 1.7e-74 284.3 336 50.6
Zm00001eb066000 Zea mays HOM05D006219 ORTHO05D007562 4.9e-74 282.7 396 42.2
MBI18_g37358_MAGBIO Magnolia biondii HOM05D006219 ORTHO05D007562 1.6e-72 277.7 313 50.2
Hma1.2p1_1227F.1_g268570 Hydrangea macrophylla HOM05D006219 ORTHO05D007562 2.7e-72 276.9 341 48.4
SEGI_10874 Sequoiadendron giganteum HOM05D006219 ORTHO05D007562 5.8e-67 259.2 381 40.2
Glyma.20G222200 Glycine max HOM05D006219 ORTHO05D007562 8.7e-63 245.4 258 50.0
MBI18_g32212_MAGBIO Magnolia biondii HOM05D006219 ORTHO05D007562 5.6e-62 242.7 474 39.2
MD04G1228600 Malus domestica HOM05D006219 ORTHO05D007562 2.1e-61 240.7 232 51.7
Mapoly0001s0431 Marchantia polymorpha HOM05D006219 ORTHO05D007562 3.7e-53 213.4 366 38.5
AagrBONN_evm.TU.Sc2ySwM_117.503 Anthoceros agrestis HOM05D006219 ORTHO05D007562 1.5e-51 208.0 376 36.4
Ciclev10027647m.g Citrus clementina HOM05D006219 ORTHO05D007562 5.8e-51 206.1 221 57.9
Pp3c18_4320 Physcomitrium patens HOM05D006219 ORTHO05D007562 6.5e-50 202.6 374 36.1
Lalb_Chr18g0044051 Lupinus albus HOM05D006219 ORTHO05D007562 8.4e-50 202.2 192 53.6
CBR_g29314 Chara braunii HOM05D006219 ORTHO05D007562 2.4e-44 184.1 383 36.3
Eucgr.H04253 Eucalyptus grandis HOM05D006219 ORTHO05D007562 5.5e-41 172.9 308 39.6
Cre06.g308450 Chlamydomonas reinhardtii HOM05D006219 ORTHO05D007562 5.1e-31 139.8 404 30.2
AagrBONN_evm.TU.Sc2ySwM_228.3126 Anthoceros agrestis HOM05D006219 ORTHO05D007562 3.7e-21 107.1 175 40.6
Cpa.g.sc162.21 Carica papaya HOM05D000369 ORTHO05D007562 8.2e-21 105.9 110 50.9
PRCOL_00003529 Prasinoderma coloniale HOM05D006219 ORTHO05D007562 2.4e-20 104.4 354 27.1
SMO137G0122 Selaginella moellendorffii HOM05D006219 ORTHO05D007562 2.6e-19 100.9 170 40.6
MCO04G553 Micromonas commoda HOM05D006219 ORTHO05D007562 7.7e-19 99.4 387 25.8
Mapoly4350s0001 Marchantia polymorpha HOM05D006219 ORTHO05D007562 5.2e-15 86.7 117 41.9
Pp3c16_6440 Physcomitrium patens HOM05D006219 ORTHO05D007562 3.5e-11 73.9 173 32.4
Glyma.15G246700 Glycine max HOM05D001461 ORTHO05D005534 3.0e-07 60.8 86 36.0


User provided reference genes

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