Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000854g0030 Nicotiana tabacum HOM05D008401 ORTHO05D002765 2.6e-52 208.4 101 100.0
Nitab4.5_0012915g0010 Nicotiana tabacum HOM05D008401 ORTHO05D002765 6.0e-49 197.2 101 94.1
Nitab4.5_0002430g0060 Nicotiana tabacum HOM05D008401 ORTHO05D002765 5.1e-48 194.1 101 92.1
Nitab4.5_0027852g0010 Nicotiana tabacum HOM05D008401 ORTHO05D002765 6.7e-48 193.7 101 91.1
Nitab4.5_0006446g0050 Nicotiana tabacum HOM05D008401 ORTHO05D002765 5.6e-47 190.7 101 90.1
Nitab4.5_0000377g0030 Nicotiana tabacum HOM05D008401 ORTHO05D002765 4.9e-43 177.6 101 82.2
Nitab4.5_0003994g0010 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.1e-42 176.4 101 84.2
Nitab4.5_0000074g0150 Nicotiana tabacum HOM05D008401 ORTHO05D002765 3.0e-40 168.3 99 80.8
Nitab4.5_0000026g0270 Nicotiana tabacum HOM05D008401 ORTHO05D002765 3.9e-40 167.9 101 78.2
Nitab4.5_0012044g0020 Nicotiana tabacum HOM05D008401 ORTHO05D002765 3.7e-38 161.4 93 81.7
Nitab4.5_0003288g0080 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.1e-37 159.8 116 68.1
Nitab4.5_0001614g0160 Nicotiana tabacum HOM05D008401 ORTHO05D002765 3.1e-37 158.3 91 82.4
Nitab4.5_0001299g0150 Nicotiana tabacum HOM05D008401 ORTHO05D002765 6.9e-37 157.1 101 79.2
Nitab4.5_0002534g0090 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.0e-35 153.3 101 74.3
Nitab4.5_0007069g0020 Nicotiana tabacum HOM05D008401 ORTHO05D002765 5.0e-35 151.0 101 73.3
Nitab4.5_0000034g0050 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.9e-34 149.1 101 70.3
Nitab4.5_0000403g0060 Nicotiana tabacum HOM05D008401 ORTHO05D002765 5.7e-31 137.5 82 78.0
Nitab4.5_0001425g0080 Nicotiana tabacum HOM05D008401 ORTHO05D002765 6.5e-27 124.0 110 62.7
Nitab4.5_0007206g0040 Nicotiana tabacum HOM05D008401 ORTHO05D002765 2.5e-26 122.1 101 63.4
Nitab4.5_0002052g0070 Nicotiana tabacum HOM05D008401 ORTHO05D002765 7.9e-25 117.1 69 81.2
Nitab4.5_0003934g0100 Nicotiana tabacum HOM05D008401 ORTHO05D002765 4.3e-23 111.3 66 81.8
Nitab4.5_0001889g0040 Nicotiana tabacum HOM05D008401 ORTHO05D002765 4.8e-22 107.8 104 58.7
Nitab4.5_0001439g0140 Nicotiana tabacum HOM05D008401 ORTHO05D002765 4.1e-21 104.8 69 76.8
Nitab4.5_0020511g0020 Nicotiana tabacum HOM05D008401 ORTHO05D002765 4.1e-21 104.8 97 59.8
Nitab4.5_0000832g0210 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.3e-19 99.8 93 59.1
Nitab4.5_0001992g0110 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.7e-19 99.4 91 59.3
Nitab4.5_0001177g0100 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.4e-18 96.3 56 82.1
Nitab4.5_0003966g0040 Nicotiana tabacum HOM05D008401 ORTHO05D002765 7.9e-17 90.5 60 75.0
Nitab4.5_0000229g0080 Nicotiana tabacum HOM05D008401 ORTHO05D002765 2.3e-16 89.0 101 42.6
Nitab4.5_0007303g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.4e-15 84.7 100 42.0
Nitab4.5_0011275g0040 Nicotiana tabacum HOM05D008401 ORTHO05D002765 4.4e-15 84.7 45 91.1
Nitab4.5_0000569g0080 Nicotiana tabacum HOM05D009153 ORTHO05D002765 4.8e-14 81.3 86 41.9
Nitab4.5_0002642g0110 Nicotiana tabacum HOM05D008401 ORTHO05D002765 4.8e-14 81.3 77 55.8
Nitab4.5_0003408g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.8e-14 81.3 101 43.6
CANSAT78G0321 Cannabis sativa HOM05D010396 ORTHO05D002765 1.1e-13 80.1 90 40.0
CANSAT80G1576 Cannabis sativa HOM05D000017 ORTHO05D000013 1.1e-13 80.1 90 38.9
CANSAT78G1392 Cannabis sativa HOM05D000017 ORTHO05D000013 1.4e-13 79.7 90 38.9
CANSAT78G2345 Cannabis sativa HOM05D000017 ORTHO05D000013 1.4e-13 79.7 90 38.9
CANSAT80G0333 Cannabis sativa HOM05D000017 ORTHO05D000013 1.4e-13 79.7 90 38.9
CANSAT80G1918 Cannabis sativa HOM05D000017 ORTHO05D000013 1.4e-13 79.7 90 38.9
CANSAT01G1096 Cannabis sativa HOM05D000017 ORTHO05D000013 2.4e-13 79.0 90 38.9
CANSAT21G0038 Cannabis sativa HOM05D008401 ORTHO05D002765 2.4e-13 79.0 90 38.9
CANSAT56G3775 Cannabis sativa HOM05D000017 ORTHO05D002765 2.4e-13 79.0 90 38.9
CANSAT25G3326 Cannabis sativa HOM05D000017 ORTHO05D002765 4.1e-13 78.2 87 39.1
CANSAT54G0413 Cannabis sativa HOM05D008401 ORTHO05D002765 4.1e-13 78.2 87 39.1
Nitab4.5_0000021g0980 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.3e-13 77.8 91 44.0
CANSAT25G0180 Cannabis sativa HOM05D000017 ORTHO05D000013 1.2e-12 76.6 90 37.8
Solyc10g052716.1 Solanum lycopersicum HOM05D000017 ORTHO05D002765 1.2e-12 76.6 80 45.0
Nitab4.5_0000730g0100 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.6e-12 76.3 93 39.8
Sopen10g023510 Solanum pennellii HOM05D000017 ORTHO05D000013 3.5e-12 75.1 80 43.8
CANSAT54G1361 Cannabis sativa HOM05D000017 ORTHO05D000013 4.5e-12 74.7 98 34.7
Nitab4.5_0002944g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.5e-12 74.7 80 45.0
CANSAT56G0367 Cannabis sativa HOM05D000017 ORTHO05D000013 5.9e-12 74.3 87 35.6
Nitab4.5_0000814g0120 Nicotiana tabacum HOM05D007248 ORTHO05D002765 5.9e-12 74.3 88 40.9
Nitab4.5_0009017g0010 Nicotiana tabacum HOM05D000017 ORTHO05D002765 5.9e-12 74.3 88 42.0
Nitab4.5_0007005g0050 Nicotiana tabacum HOM05D007248 ORTHO05D002765 7.7e-12 73.9 88 42.0
Nitab4.5_0008036g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.0e-11 73.6 88 42.0
Nitab4.5_0010319g0060 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.3e-11 73.2 88 40.9
Nitab4.5_0000692g0140 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.7e-11 72.8 85 41.2
Nitab4.5_0004449g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.2e-11 72.4 88 43.2
Nitab4.5_0008296g0040 Nicotiana tabacum HOM05D009153 ORTHO05D011903 2.2e-11 72.4 93 38.7
Nitab4.5_0007528g0020 Nicotiana tabacum HOM05D009153 ORTHO05D011903 2.9e-11 72.0 107 36.4
Nitab4.5_0008559g0020 Nicotiana tabacum HOM05D000017 ORTHO05D000013 2.9e-11 72.0 88 39.8
Nitab4.5_0000832g0070 Nicotiana tabacum HOM05D008401 ORTHO05D002765 3.8e-11 71.6 48 72.9
Nitab4.5_0001968g0150 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.8e-11 71.6 88 40.9
CANSAT64G0409 Cannabis sativa HOM05D000017 ORTHO05D000013 6.5e-11 70.9 98 32.7
Nitab4.5_0000444g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 6.5e-11 70.9 84 41.7
Nitab4.5_0008791g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 6.5e-11 70.9 88 42.0
Nitab4.5_0006644g0060 Nicotiana tabacum HOM05D007248 ORTHO05D000013 1.1e-10 70.1 80 42.5
Nitab4.5_0010885g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.1e-10 70.1 68 47.1
Nitab4.5_0011642g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.1e-10 70.1 100 39.0
Nitab4.5_0001212g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.9e-10 69.3 84 36.9
Nitab4.5_0001259g0140 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.9e-10 69.3 48 68.8
CAN.G1324.1 Capsicum annuum HOM05D000164 ORTHO05D000001 3.2e-10 68.6 91 36.3
Nitab4.5_0000709g0030 Nicotiana tabacum HOM05D000017 ORTHO05D002765 4.2e-10 68.2 68 47.1
Sopen05g022560 Solanum pennellii HOM05D000017 ORTHO05D000013 4.2e-10 68.2 83 37.3
Nitab4.5_0001140g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 5.5e-10 67.8 92 39.1
Nitab4.5_0000073g0520 Nicotiana tabacum HOM05D009153 ORTHO05D002765 9.4e-10 67.0 84 40.5
Nitab4.5_0004496g0020 Nicotiana tabacum HOM05D007248 ORTHO05D000013 9.4e-10 67.0 85 40.0
Nitab4.5_0008752g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 9.4e-10 67.0 83 41.0
Peaxi162Scf00827g00217 Petunia axillaris HOM05D009153 ORTHO05D011903 9.4e-10 67.0 72 40.3
CANSAT25G0681 Cannabis sativa HOM05D000017 ORTHO05D000013 1.2e-09 66.6 90 35.6
Nitab4.5_0002297g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.2e-09 66.6 101 35.6
Nitab4.5_0010618g0050 Nicotiana tabacum HOM05D000017 ORTHO05D000013 1.2e-09 66.6 84 40.5
Nitab4.5_0000646g0240 Nicotiana tabacum HOM05D008401 ORTHO05D000013 2.1e-09 65.9 34 85.3
Nitab4.5_0007360g0070 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.7e-09 65.5 91 42.9
Nitab4.5_0000904g0120 Nicotiana tabacum HOM05D009153 ORTHO05D011903 3.6e-09 65.1 73 41.1
Nitab4.5_0008756g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.6e-09 65.1 64 46.9
Nitab4.5_0013575g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 8.0e-09 63.9 68 42.6
Nitab4.5_0000554g0020 Nicotiana tabacum HOM05D008401 ORTHO05D000013 1.0e-08 63.5 101 40.6
Nitab4.5_0003730g0050 Nicotiana tabacum HOM05D000017 ORTHO05D002765 1.0e-08 63.5 68 44.1
Nitab4.5_0013025g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.0e-08 63.5 88 40.9
MBI05_g14906_MAGBIO Magnolia biondii HOM05D009229 ORTHO05D010914 1.4e-08 63.2 71 38.0
Nitab4.5_0001947g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.4e-08 63.2 76 36.8
Nitab4.5_0009030g0020 Nicotiana tabacum HOM05D007248 ORTHO05D000013 1.4e-08 63.2 64 46.9
Nitab4.5_0000890g0220 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.8e-08 62.8 101 35.6
Nitab4.5_0005376g0100 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.8e-08 62.8 81 38.3
Nitab4.5_0015150g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.8e-08 62.8 83 41.0
CANSAT01G0081 Cannabis sativa HOM05D000017 ORTHO05D000013 2.3e-08 62.4 80 32.5
CANSAT01G1220 Cannabis sativa HOM05D000017 ORTHO05D000013 2.3e-08 62.4 80 32.5
CANSAT11G1223 Cannabis sativa HOM05D000017 ORTHO05D000013 2.3e-08 62.4 80 32.5
CANSAT35G0979 Cannabis sativa HOM05D000017 ORTHO05D000013 2.3e-08 62.4 80 32.5
CANSAT35G1006 Cannabis sativa HOM05D000017 ORTHO05D000013 2.3e-08 62.4 80 32.5
CANSAT54G0083 Cannabis sativa HOM05D010396 ORTHO05D000013 2.3e-08 62.4 80 32.5
CANSAT54G2057 Cannabis sativa HOM05D000017 ORTHO05D000013 2.3e-08 62.4 80 32.5
CANSAT56G3361 Cannabis sativa HOM05D008401 ORTHO05D002765 2.3e-08 62.4 80 32.5
CANSAT21G2334 Cannabis sativa HOM05D000017 ORTHO05D000013 3.0e-08 62.0 84 34.5
TAR257G0001 Trochodendron aralioides HOM05D000017 ORTHO05D000013 3.0e-08 62.0 96 31.2
Nitab4.5_0002908g0150 Nicotiana tabacum HOM05D000017 ORTHO05D000013 5.2e-08 61.2 34 82.4
Nitab4.5_0003767g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 5.2e-08 61.2 88 37.5
MBI14_g32122_MAGBIO Magnolia biondii HOM05D004126 ORTHO05D010914 8.8e-08 60.5 68 33.8
Nitab4.5_0002951g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 8.8e-08 60.5 85 35.3
Oeu030213.1 Olea europaea HOM05D000017 ORTHO05D000013 8.8e-08 60.5 83 28.9
ATR0727G001 Amborella trichopoda HOM05D000017 ORTHO05D000013 1.1e-07 60.1 66 40.9
CANSAT21G1876 Cannabis sativa HOM05D000017 ORTHO05D000013 1.1e-07 60.1 66 40.9
Nitab4.5_0001062g0040 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.1e-07 60.1 55 45.5
CANSAT64G1942 Cannabis sativa HOM05D000017 ORTHO05D000013 1.5e-07 59.7 82 32.9
Nitab4.5_0000487g0020 Nicotiana tabacum HOM05D000017 ORTHO05D000013 2.0e-07 59.3 55 45.5
CANSAT35G1021 Cannabis sativa HOM05D000017 ORTHO05D000013 2.6e-07 58.9 80 31.2
TAR423G0001 Trochodendron aralioides HOM05D000017 ORTHO05D000013 2.6e-07 58.9 96 27.1
CANSAT11G0986 Cannabis sativa HOM05D000017 ORTHO05D000013 3.3e-07 58.5 66 39.4
CANSAT25G1873 Cannabis sativa HOM05D000017 ORTHO05D000013 3.3e-07 58.5 82 32.9
CANSAT35G1887 Cannabis sativa HOM05D000017 ORTHO05D000013 3.3e-07 58.5 84 32.1
CANSAT54G1096 Cannabis sativa HOM05D000017 ORTHO05D000013 3.3e-07 58.5 84 32.1
MBI12_g39871_MAGBIO Magnolia biondii HOM05D009229 ORTHO05D010914 3.3e-07 58.5 71 33.8
Nitab4.5_0001259g0150 Nicotiana tabacum HOM05D008401 ORTHO05D002765 3.3e-07 58.5 35 74.3
Nitab4.5_0007565g0070 Nicotiana tabacum HOM05D000017 ORTHO05D002765 3.3e-07 58.5 64 39.1
Oeu041330.1 Olea europaea HOM05D000017 ORTHO05D000013 3.3e-07 58.5 82 29.3
Nitab4.5_0002612g0060 Nicotiana tabacum HOM05D007248 ORTHO05D000013 4.4e-07 58.2 88 37.5
MBI03_g17129_MAGBIO Magnolia biondii HOM05D009229 ORTHO05D010914 5.7e-07 57.8 68 33.8
Sopen08g005870 Solanum pennellii HOM05D000017 ORTHO05D000013 5.7e-07 57.8 83 36.1
CANSAT78G0171 Cannabis sativa HOM05D000017 ORTHO05D000013 7.5e-07 57.4 80 31.2
MBI05_g40421_MAGBIO Magnolia biondii HOM05D009229 ORTHO05D010914 7.5e-07 57.4 94 31.9
Nitab4.5_0000159g0210 Nicotiana tabacum HOM05D000017 ORTHO05D000013 7.5e-07 57.4 68 39.7
Oeu034871.1 Olea europaea HOM05D000017 ORTHO05D000013 7.5e-07 57.4 83 27.7
Nitab4.5_0000095g0010 Nicotiana tabacum HOM05D000017 ORTHO05D000013 9.7e-07 57.0 63 41.3
MBI05_g12020_MAGBIO Magnolia biondii HOM05D000017 ORTHO05D000013 1.3e-06 56.6 72 27.8
CANSAT78G2408 Cannabis sativa HOM05D000017 ORTHO05D000013 1.7e-06 56.2 90 26.7
MBI14_g34390_MAGBIO Magnolia biondii HOM05D009229 ORTHO05D010914 1.7e-06 56.2 71 33.8
Oeu019782.1 Olea europaea HOM05D012404 ORTHO05D002765 1.7e-06 56.2 76 28.9
Oeu016698.1 Olea europaea HOM05D000017 ORTHO05D000013 2.2e-06 55.8 82 29.3
CANSAT64G0129 Cannabis sativa HOM05D000017 ORTHO05D000013 2.8e-06 55.5 74 36.5
MBI14_g11629_MAGBIO Magnolia biondii HOM05D009229 ORTHO05D010914 3.7e-06 55.1 68 35.3
TWI18G0050 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 3.7e-06 55.1 68 36.8
Nitab4.5_0004770g0070 Nicotiana tabacum HOM05D008401 ORTHO05D002765 6.3e-06 54.3 40 65.0
TAR299G0001 Trochodendron aralioides HOM05D000017 ORTHO05D000013 6.3e-06 54.3 56 42.9
Nitab4.5_0000662g0100 Nicotiana tabacum HOM05D008401 ORTHO05D002765 8.2e-06 53.9 34 70.6
Sopen01g015850 Solanum pennellii HOM05D000004 ORTHO05D000002 8.2e-06 53.9 68 32.4
TWI63G0423 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 8.2e-06 53.9 68 36.8


User provided reference genes

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