Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000848g0180 Nicotiana tabacum HOM05D007104 ORTHO05D008851 0.0e+00 1475.3 867 100.0
Nitab4.5_0006316g0040 Nicotiana tabacum HOM05D007104 ORTHO05D008851 0.0e+00 1278.1 878 87.9
Solyc09g007200.4 Solanum lycopersicum HOM05D007104 ORTHO05D008851 1.2e-307 1059.7 863 77.6
Sopen09g002070 Solanum pennellii HOM05D007104 ORTHO05D008851 3.6e-307 1058.1 863 77.5
Peaxi162Scf00005g05111 Petunia axillaris HOM05D007104 ORTHO05D008851 1.8e-303 1045.8 857 73.7
CAN.G350.45 Capsicum annuum HOM05D007104 ORTHO05D008851 5.3e-287 991.1 765 80.4
Migut.J00404 Erythranthe guttata HOM05D007104 ORTHO05D008851 5.1e-197 692.2 859 53.6
Actinidia05278 Actinidia chinensis HOM05D007104 ORTHO05D008851 1.6e-195 687.2 847 57.9
Hma1.2p1_0111F.1_g053700 Hydrangea macrophylla HOM05D007104 ORTHO05D008851 3.8e-192 676.0 801 55.4
Cc06_g03420 Coffea canephora HOM05D007104 ORTHO05D008851 3.6e-190 669.5 849 53.0
Dinv35696 Davidia involucrata HOM05D007104 ORTHO05D008851 1.4e-189 667.5 853 53.2
CSS0009185 Camellia sinensis var. sinensis HOM05D007104 ORTHO05D008851 1.5e-188 664.1 797 58.8
GSVIVG01025541001 Vitis vinifera HOM05D007104 ORTHO05D008851 7.4e-188 661.8 856 52.0
CiPaw.09G181900 Carya illinoinensis HOM05D007104 ORTHO05D008851 1.7e-187 660.6 859 55.6
Duzib128G0648 Durio zibethinus HOM05D007104 ORTHO05D008851 3.4e-185 652.9 860 50.5
Thecc.05G052200 Theobroma cacao HOM05D007104 ORTHO05D008851 7.7e-185 651.7 797 53.8
MSTRG.19128 Avicennia marina HOM05D007104 ORTHO05D008851 1.7e-184 650.6 853 52.6
DCAR_017721 Daucus carota HOM05D007104 ORTHO05D008851 1.7e-184 650.6 850 54.6
SalBow3G1198 Salvia bowleyana HOM05D007104 ORTHO05D008851 1.4e-183 647.5 871 51.1
EL10Ac7g17325 Beta vulgaris HOM05D007104 ORTHO05D008851 2.7e-182 643.3 781 52.9
TAR633G1446 Trochodendron aralioides HOM05D007104 ORTHO05D008851 4.7e-182 642.5 855 51.6
Gorai.009G420800 Gossypium raimondii HOM05D007104 ORTHO05D008851 1.8e-181 640.6 804 52.2
Lj3C977G16 Lonicera japonica HOM05D007104 ORTHO05D008851 1.1e-180 637.9 872 55.2
Gohir.A04G077100 Gossypium hirsutum HOM05D007104 ORTHO05D008851 1.5e-180 637.5 869 50.3
RcHm_v2.0_Chr3g0468421 Rosa chinensis HOM05D007104 ORTHO05D008851 5.3e-178 629.0 852 50.7
Cfa017487 Carpinus fangiana HOM05D007104 ORTHO05D008851 1.5e-177 627.5 794 57.3
QL07p045556 Quercus lobata HOM05D007104 ORTHO05D008851 5.9e-177 625.5 856 55.4
Thhalv10012661m.g Eutrema salsugineum HOM05D007104 ORTHO05D008851 2.7e-174 616.7 794 51.1
FAN05G0960 Fragaria x ananassa HOM05D007104 ORTHO05D008851 1.4e-173 614.4 852 49.4
FAN14G4814 Fragaria x ananassa HOM05D007104 ORTHO05D008851 2.0e-172 610.5 854 49.2
Ciclev10011055m.g Citrus clementina HOM05D007104 ORTHO05D008851 3.3e-172 609.8 802 51.7
PGR004G2266 Punica granatum HOM05D007104 ORTHO05D008851 4.4e-172 609.4 795 52.8
Potri.006G132700 Populus trichocarpa HOM05D007104 ORTHO05D008851 7.4e-172 608.6 856 49.1
Manes.08G001800 Manihot esculenta HOM05D007104 ORTHO05D008851 1.3e-171 607.8 855 50.5
Nn2g12960 Nelumbo nucifera HOM05D007104 ORTHO05D008851 2.2e-171 607.1 866 49.3
Sabra06G0104200 Salix brachista HOM05D007104 ORTHO05D008851 6.3e-171 605.5 856 48.6
MD12G1126500 Malus domestica HOM05D007104 ORTHO05D008851 1.1e-170 604.7 858 47.9
FvH4_6g15120 Fragaria vesca HOM05D007104 ORTHO05D008851 2.6e-169 600.1 854 49.3
vmacro08689 Vaccinium macrocarpon HOM05D007104 ORTHO05D008851 1.7e-168 597.4 872 50.3
ECA238G4406 Erigeron canadensis HOM05D001465 ORTHO05D001434 1.1e-167 594.7 862 47.7
Haze_20670 Corylus avellana HOM05D007104 ORTHO05D008851 1.5e-167 594.3 815 51.7
Aa31LG1G22070 Aethionema arabicum HOM05D007104 ORTHO05D008851 2.7e-166 590.1 816 48.7
Lsat_1_v5_gn_2_109900 Lactuca sativa HOM05D007104 ORTHO05D008851 8.8e-165 585.1 807 49.2
Gohir.D04G116200 Gossypium hirsutum HOM05D007104 ORTHO05D008851 9.8e-164 581.6 685 55.9
HanXRQChr05g0129241 Helianthus annuus HOM05D007104 ORTHO05D008851 9.8e-164 581.6 801 49.8
SGA_v2.0_scaffold126G33879 Striga asiatica HOM05D007104 ORTHO05D008851 3.1e-162 576.6 856 48.8
AUR62040527 Chenopodium quinoa HOM05D007104 ORTHO05D008851 1.6e-161 574.3 766 51.3
Sed0027238 Sechium edule HOM05D007104 ORTHO05D008851 5.9e-161 572.4 843 47.8
BcaC06g32013 Brassica carinata HOM05D007104 ORTHO05D008851 1.0e-160 571.6 860 46.2
COL.COLO4_27102 Corchorus olitorius HOM05D007104 ORTHO05D008851 1.7e-160 570.9 700 53.7
arahy.Tifrunner.gnm1.ann1.Z3T1FA Arachis hypogaea HOM05D007104 ORTHO05D008851 2.9e-160 570.1 788 48.1
arahy.Tifrunner.gnm1.ann1.UD3AFU Arachis hypogaea HOM05D007104 ORTHO05D008851 1.9e-159 567.4 788 47.8
C09p73820 Brassica napus HOM05D007104 ORTHO05D008851 1.2e-158 564.7 858 45.9
BolC9t60116H Brassica oleracea HOM05D007104 ORTHO05D008851 1.2e-158 564.7 858 45.9
A10p32890 Brassica napus HOM05D007104 ORTHO05D008851 2.1e-158 563.9 864 45.9
BraA10t45326Z Brassica rapa HOM05D007104 ORTHO05D008851 2.1e-158 563.9 864 45.9
Sp6g39750 Schrenkiella parvula HOM05D007104 ORTHO05D008851 8.8e-157 558.5 869 45.7
Carub.0006s0163 Capsella rubella HOM05D007104 ORTHO05D008851 1.2e-156 558.1 791 48.4
Prupe.6G243100 Prunus persica HOM05D007104 ORTHO05D008851 2.6e-156 557.0 794 49.2
Sc01g0003660 Simmondsia chinensis HOM05D007104 ORTHO05D008851 6.3e-155 552.4 748 49.2
AL6G12100 Arabidopsis lyrata HOM05D007104 ORTHO05D008851 8.3e-155 552.0 790 47.8
AT5G02830 Arabidopsis thaliana HOM05D007104 ORTHO05D008851 3.1e-154 550.1 847 45.2
FAN09G1206 Fragaria x ananassa HOM05D007104 ORTHO05D008851 1.2e-153 548.1 852 46.9
TWI18G0316 Tripterygium wilfordii HOM05D007104 ORTHO05D008851 1.6e-153 547.7 779 51.6
Hund12063 Selenicereus undatus HOM05D007104 ORTHO05D008851 2.0e-153 547.4 783 48.8
MELO3C003069.2 Cucumis melo HOM05D007104 ORTHO05D008851 2.9e-152 543.5 841 45.1
THA.LOC104826989 Tarenaya hassleriana HOM05D007104 ORTHO05D008851 5.0e-152 542.7 808 46.9
Glyma.19G177700 Glycine max HOM05D007104 ORTHO05D008851 1.5e-151 541.2 846 48.2
Lj1g0014647 Lotus japonicus HOM05D007104 ORTHO05D008851 5.6e-151 539.3 778 49.1
CsaV3_4G024380 Cucumis sativus L. HOM05D007104 ORTHO05D008851 9.8e-148 528.5 839 46.4
VMungo1383G0332 Vigna mungo HOM05D007104 ORTHO05D008851 2.4e-146 523.9 846 49.2
CANSAT80G1630 Cannabis sativa HOM05D007104 ORTHO05D008851 4.1e-146 523.1 858 45.2
Phvul.001G174000 Phaseolus vulgaris HOM05D007104 ORTHO05D008851 7.0e-146 522.3 761 48.0
Ca_08818_v3 Cicer arietinum L. HOM05D007104 ORTHO05D008851 4.6e-145 519.6 793 45.9
ATR0594G196 Amborella trichopoda HOM05D007104 ORTHO05D008851 3.9e-144 516.5 856 44.6
ClCG04G008780 Citrullus lanatus HOM05D007104 ORTHO05D008851 7.3e-143 512.3 845 45.6
TPR.G36926 Trifolium pratense HOM05D007104 ORTHO05D008851 3.6e-142 510.0 743 46.7
Medtr7g100550 Medicago truncatula HOM05D007104 ORTHO05D008851 1.4e-141 508.1 755 47.9
PSO339G1446 Papaver somniferum HOM05D007104 ORTHO05D008851 2.6e-140 503.8 872 47.1
Lalb_Chr20g0112911 Lupinus albus HOM05D007104 ORTHO05D008851 1.3e-139 501.5 760 46.6
PSO384G2670 Papaver somniferum HOM05D007104 ORTHO05D008851 2.2e-139 500.7 912 45.6
Psat3g045920 Pisum sativum HOM05D007104 ORTHO05D008851 3.7e-139 500.0 763 46.4
MBI05_g33311_MAGBIO Magnolia biondii HOM05D007104 ORTHO05D008851 1.1e-138 498.4 893 45.0
AUR62042917 Chenopodium quinoa HOM05D007104 ORTHO05D008851 6.6e-136 489.2 759 38.7
Os03g0284900 Oryza sativa ssp. japonica HOM05D007104 ORTHO05D008851 1.7e-128 464.5 793 42.9
HPP92_003603 Vanilla planifolia HOM05D007104 ORTHO05D008851 5.2e-117 426.4 730 43.8
Eucgr.K03203 Eucalyptus grandis HOM05D007104 ORTHO05D008851 9.3e-114 415.6 593 51.6
SEGI_02163 Sequoiadendron giganteum HOM05D007104 ORTHO05D008851 2.5e-103 380.9 801 39.1
Aqoxy2G01885 Aquilegia oxysepala HOM05D007104 ORTHO05D008851 3.4e-100 370.5 560 54.5
Oeu034822.1 Olea europaea HOM05D007104 ORTHO05D008851 5.1e-96 356.7 399 51.6
Glyma.03G177000 Glycine max HOM05D007104 ORTHO05D008851 3.7e-94 350.5 528 51.1
Zm00001eb397200 Zea mays HOM05D007104 ORTHO05D008851 1.8e-80 305.1 641 32.3
Cpa.g.sc45.26 Carica papaya HOM05D007104 ORTHO05D008851 6.1e-73 280.0 535 46.0
Pp3c22_3070 Physcomitrium patens HOM05D007104 ORTHO05D008851 3.9e-72 277.3 796 34.8
Atru.chr8.2537 Acer truncatum HOM05D007104 ORTHO05D008851 3.1e-69 267.7 407 48.6
Mapoly0039s0098 Marchantia polymorpha HOM05D007104 ORTHO05D008851 7.7e-68 263.1 834 36.0
Pp3c21_12360 Physcomitrium patens HOM05D007104 ORTHO05D008851 1.2e-60 239.2 789 33.2
Atru.chr8.2538 Acer truncatum HOM05D007104 ORTHO05D008851 1.5e-58 232.3 267 48.7
unitig_16.g32855 Utricularia gibba HOM05D007104 ORTHO05D008851 4.1e-53 214.2 233 51.5
CARHR210500 Cardamine hirsuta HOM05D007104 ORTHO05D008851 2.1e-49 201.8 236 47.5
Oeu027653.1 Olea europaea HOM05D007104 ORTHO05D008851 1.3e-43 182.6 177 57.1
SMO351G0222 Selaginella moellendorffii HOM05D007104 ORTHO05D008851 3.8e-43 181.0 538 33.6
CDE02G1389 Ceratophyllum demersum HOM05D007104 ORTHO05D008851 5.4e-37 160.6 320 33.8
Pp3c22_3080 Physcomitrium patens HOM05D007104 ORTHO05D008851 1.3e-30 139.4 202 37.6
Hma1.2p1_0111F.1_g053720 Hydrangea macrophylla HOM05D007104 ORTHO05D008851 3.0e-27 128.3 131 52.7
Rhsim04G0181000 Rhododendron simsii HOM05D007104 ORTHO05D008851 8.6e-19 100.1 105 73.3
RcHm_v2.0_Chr3g0468351 Rosa chinensis HOM05D007104 ORTHO05D008851 3.4e-15 88.2 74 54.1
CBR_g39241 Chara braunii HOM05D007104 ORTHO05D008851 1.8e-08 65.9 161 26.7
arahy.Tifrunner.gnm1.ann1.CUF5YV Arachis hypogaea HOM05D002479 ORTHO05D002675 2.6e-07 62.0 198 24.2
Duzib264G1167 Durio zibethinus HOM05D005949 ORTHO05D006945 3.8e-06 58.2 174 31.0
AagrBONN_evm.TU.Sc2ySwM_340.574 Anthoceros agrestis HOM05D000001 ORTHO05D000003 6.4e-06 57.4 152 30.3
AagrBONN_evm.TU.Sc2ySwM_368.2664 Anthoceros agrestis HOM05D000001 ORTHO05D000003 6.4e-06 57.4 197 26.9


User provided reference genes

Program Settings