Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000845g0140 Nicotiana tabacum HOM05D006027 ORTHO05D007604 1.5e-113 412.9 213 100.0
Nitab4.5_0002435g0010 Nicotiana tabacum HOM05D006027 ORTHO05D007604 4.0e-95 351.7 181 98.3
CAN.G536.12 Capsicum annuum HOM05D006027 ORTHO05D007604 3.0e-90 335.5 181 93.4
PGSC0003DMG400008585 Solanum tuberosum HOM05D006027 ORTHO05D007604 3.0e-90 335.5 181 92.3
Sopen09g025650 Solanum pennellii HOM05D006027 ORTHO05D007604 7.4e-89 330.9 181 90.6
Solyc09g064500.3 Solanum lycopersicum HOM05D006027 ORTHO05D007604 2.1e-88 329.3 181 90.1
Dinv43066 Davidia involucrata HOM05D006027 ORTHO05D007604 2.4e-71 272.7 181 76.2
Gohir.A07G152700 Gossypium hirsutum HOM05D006027 ORTHO05D007604 4.5e-70 268.5 182 75.8
DCAR_000568 Daucus carota HOM05D006027 ORTHO05D007604 1.3e-69 266.9 181 74.6
Gohir.D07G158900 Gossypium hirsutum HOM05D006027 ORTHO05D007604 1.3e-69 266.9 182 75.8
Migut.D00479 Erythranthe guttata HOM05D006027 ORTHO05D007604 2.2e-69 266.2 183 77.0
Gorai.001G182100 Gossypium raimondii HOM05D006027 ORTHO05D007604 3.8e-69 265.4 182 75.3
CANSAT01G0515 Cannabis sativa HOM05D006027 ORTHO05D007604 2.5e-68 262.7 183 74.9
CSS0010160 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 7.2e-68 261.2 182 72.0
CSS0012566 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 1.6e-67 260.0 182 71.4
FAN15G2830 Fragaria x ananassa HOM05D006027 ORTHO05D007604 1.6e-67 260.0 182 74.2
CANSAT01G2333 Cannabis sativa HOM05D006027 ORTHO05D007604 4.6e-67 258.5 183 74.9
Atru.chr5.1865 Acer truncatum HOM05D006027 ORTHO05D007604 7.9e-67 257.7 181 71.8
Prupe.8G215000 Prunus persica HOM05D006027 ORTHO05D007604 3.0e-66 255.8 181 71.8
Thecc.01G249800 Theobroma cacao HOM05D006027 ORTHO05D007604 3.9e-66 255.4 182 72.5
Haze_24710 Corylus avellana HOM05D006027 ORTHO05D007604 5.1e-66 255.0 184 72.8
Glyma.13G127200 Glycine max HOM05D006027 ORTHO05D007604 8.8e-66 254.2 194 71.1
Manes.12G038000 Manihot esculenta HOM05D006027 ORTHO05D007604 8.8e-66 254.2 206 68.0
Oeu015437.1 Olea europaea HOM05D006027 ORTHO05D007604 2.0e-65 253.1 158 78.5
QL09p041558 Quercus lobata HOM05D006027 ORTHO05D007604 3.3e-65 252.3 180 74.4
FAN27G2528 Fragaria x ananassa HOM05D006027 ORTHO05D007604 4.3e-65 251.9 182 72.5
Lalb_Chr06g0170731 Lupinus albus HOM05D006027 ORTHO05D007604 5.7e-65 251.5 181 73.5
Phvul.007G153500 Phaseolus vulgaris HOM05D006027 ORTHO05D007604 5.7e-65 251.5 181 71.8
Potri.002G256400 Populus trichocarpa HOM05D006027 ORTHO05D007604 7.4e-65 251.1 182 72.0
Actinidia23700 Actinidia chinensis HOM05D006027 ORTHO05D007604 9.7e-65 250.8 181 71.8
VMungo0720G1620 Vigna mungo HOM05D006027 ORTHO05D007604 9.7e-65 250.8 181 71.3
Duzib211G0648 Durio zibethinus HOM05D006027 ORTHO05D007604 1.3e-64 250.4 182 72.0
Duzib138G0534 Durio zibethinus HOM05D006027 ORTHO05D007604 2.2e-64 249.6 183 72.7
MD05G1188500 Malus domestica HOM05D006027 ORTHO05D007604 2.2e-64 249.6 181 70.7
Actinidia09513 Actinidia chinensis HOM05D006027 ORTHO05D007604 4.8e-64 248.4 187 70.1
PGR044G2038 Punica granatum HOM05D006027 ORTHO05D007604 4.8e-64 248.4 199 68.3
Cc01_g17770 Coffea canephora HOM05D006027 ORTHO05D007604 6.3e-64 248.1 182 72.0
FvH4_2g20470 Fragaria vesca HOM05D006027 ORTHO05D007604 6.3e-64 248.1 182 71.4
FAN24G3422 Fragaria x ananassa HOM05D006027 ORTHO05D007604 6.3e-64 248.1 182 71.4
Sabra02G0194900 Salix brachista HOM05D006027 ORTHO05D007604 6.3e-64 248.1 182 72.5
GSVIVG01028434001 Vitis vinifera HOM05D006027 ORTHO05D007604 8.2e-64 247.7 181 69.6
Aqoxy5G00130 Aquilegia oxysepala HOM05D006027 ORTHO05D007604 1.1e-63 247.3 184 71.7
Lsat_1_v5_gn_5_181161 Lactuca sativa HOM05D006027 ORTHO05D007604 1.1e-63 247.3 182 69.2
Eucgr.K01424 Eucalyptus grandis HOM05D006027 ORTHO05D007604 1.4e-63 246.9 182 69.8
Glyma.10G040600 Glycine max HOM05D006027 ORTHO05D007604 1.4e-63 246.9 181 71.3
TAR633G0397 Trochodendron aralioides HOM05D006027 ORTHO05D007604 2.4e-63 246.1 183 71.0
HanXRQChr01g0014971 Helianthus annuus HOM05D006027 ORTHO05D007604 3.1e-63 245.7 183 69.9
Manes.13G039500 Manihot esculenta HOM05D006027 ORTHO05D007604 3.1e-63 245.7 182 70.9
SGA_v2.0_scaffold1G00660 Striga asiatica HOM05D006027 ORTHO05D007604 6.9e-63 244.6 186 71.0
Oeu052083.1 Olea europaea HOM05D006027 ORTHO05D007604 9.1e-63 244.2 145 82.1
TAR362G0914 Trochodendron aralioides HOM05D006027 ORTHO05D007604 9.1e-63 244.2 183 69.4
MD10G1176000 Malus domestica HOM05D006027 ORTHO05D007604 1.2e-62 243.8 181 70.2
vmacro14793 Vaccinium macrocarpon HOM05D006027 ORTHO05D007604 2.6e-62 242.7 182 70.9
Lj5g0017558 Lotus japonicus HOM05D006027 ORTHO05D007604 3.4e-62 242.3 183 68.9
Lalb_Chr02g0152741 Lupinus albus HOM05D006027 ORTHO05D007604 7.7e-62 241.1 218 64.2
Cfa002488 Carpinus fangiana HOM05D006027 ORTHO05D007604 1.3e-61 240.4 166 74.7
Medtr1g069465 Medicago truncatula HOM05D006027 ORTHO05D007604 3.8e-61 238.8 182 70.9
Lj1C74G4 Lonicera japonica HOM05D006027 ORTHO05D007604 5.0e-61 238.4 159 76.7
PSO764G0320 Papaver somniferum HOM05D006027 ORTHO05D007604 5.0e-61 238.4 185 68.1
Ca_09646_v3 Cicer arietinum L. HOM05D006027 ORTHO05D007604 6.5e-61 238.0 181 71.8
TPR.G5919 Trifolium pratense HOM05D006027 ORTHO05D007604 6.5e-61 238.0 182 70.9
TWI18G0031 Tripterygium wilfordii HOM05D006027 ORTHO05D007604 8.5e-61 237.7 182 66.5
MELO3C022393.2 Cucumis melo HOM05D006027 ORTHO05D007604 1.4e-60 236.9 185 68.6
ClCG06G001400 Citrullus lanatus HOM05D006027 ORTHO05D007604 1.9e-60 236.5 188 66.5
Psat6g062520 Pisum sativum HOM05D006027 ORTHO05D007604 3.2e-60 235.7 182 69.2
Nn3g19801 Nelumbo nucifera HOM05D006027 ORTHO05D007604 4.2e-60 235.3 182 68.7
AUR62025437 Chenopodium quinoa HOM05D006027 ORTHO05D007604 5.5e-60 235.0 185 70.8
arahy.Tifrunner.gnm1.ann1.72UZ71 Arachis hypogaea HOM05D006027 ORTHO05D007604 3.6e-59 232.3 181 68.0
arahy.Tifrunner.gnm1.ann1.FRV526 Arachis hypogaea HOM05D006027 ORTHO05D007604 3.6e-59 232.3 181 68.0
PSO832G0858 Papaver somniferum HOM05D006027 ORTHO05D007604 7.9e-59 231.1 184 66.8
Rhsim01G0260300 Rhododendron simsii HOM05D006027 ORTHO05D007604 1.8e-58 229.9 154 76.0
ECA248G3782 Erigeron canadensis HOM05D006027 ORTHO05D007604 2.3e-58 229.6 156 71.8
Sed0007731 Sechium edule HOM05D006027 ORTHO05D007604 1.5e-57 226.9 171 66.7
Peaxi162Scf00043g00255 Petunia axillaris HOM05D006027 ORTHO05D007604 2.6e-57 226.1 116 94.8
Hund18287 Selenicereus undatus HOM05D006027 ORTHO05D007604 5.7e-57 224.9 181 66.3
VMungo1383G1953 Vigna mungo HOM05D006027 ORTHO05D007604 3.7e-56 222.2 182 63.2
EL10Ac7g17691 Beta vulgaris HOM05D006027 ORTHO05D007604 8.2e-56 221.1 149 75.2
Phvul.001G165200 Phaseolus vulgaris HOM05D006027 ORTHO05D007604 1.4e-55 220.3 183 62.8
CDE02G4364 Ceratophyllum demersum HOM05D006027 ORTHO05D007604 2.4e-55 219.5 182 64.8
Os01g0938100 Oryza sativa ssp. japonica HOM05D006027 ORTHO05D007604 1.6e-54 216.9 182 63.2
AUR62008802 Chenopodium quinoa HOM05D006027 ORTHO05D007604 2.0e-54 216.5 117 88.9
MBI07_g08912_MAGBIO Magnolia biondii HOM05D006027 ORTHO05D007604 2.6e-54 216.1 184 63.0
Aa31LG2G21720 Aethionema arabicum HOM05D006027 ORTHO05D007604 5.9e-54 214.9 182 63.2
Ciclev10022322m.g Citrus clementina HOM05D006027 ORTHO05D007604 1.3e-53 213.8 171 65.5
COL.COLO4_10205 Corchorus olitorius HOM05D006027 ORTHO05D007604 3.8e-53 212.2 115 86.1
AT4G28660 Arabidopsis thaliana HOM05D006027 ORTHO05D007604 1.5e-52 210.3 181 60.8
SalBow4G0311 Salvia bowleyana HOM05D006027 ORTHO05D007604 2.5e-52 209.5 116 87.9
AL7G23880 Arabidopsis lyrata HOM05D006027 ORTHO05D007604 4.2e-52 208.8 181 60.2
CARHR236440 Cardamine hirsuta HOM05D006027 ORTHO05D007604 9.4e-52 207.6 179 60.3
A03p58340 Brassica napus HOM05D006027 ORTHO05D007604 1.2e-51 207.2 182 60.4
BcaC06g32609 Brassica carinata HOM05D006027 ORTHO05D007604 2.1e-51 206.5 174 62.1
Thhalv10026347m.g Eutrema salsugineum HOM05D006027 ORTHO05D007604 2.7e-51 206.1 181 60.2
THA.LOC104814531 Tarenaya hassleriana HOM05D006027 ORTHO05D007604 2.7e-51 206.1 183 59.6
Cpa.g.sc87.33 Carica papaya HOM05D006027 ORTHO05D007604 6.1e-51 204.9 115 83.5
BcaNung04696 Brassica carinata HOM05D006027 ORTHO05D007604 1.8e-50 203.4 197 56.9
A01p09280 Brassica napus HOM05D006027 ORTHO05D007604 2.3e-50 203.0 182 58.8
Carub.0007s1200 Capsella rubella HOM05D006027 ORTHO05D007604 2.3e-50 203.0 183 58.5
Sp7g26630 Schrenkiella parvula HOM05D006027 ORTHO05D007604 2.3e-50 203.0 181 59.7
HPP92_027289 Vanilla planifolia HOM05D006027 ORTHO05D007604 3.0e-50 202.6 151 64.9
C01p10860 Brassica napus HOM05D006027 ORTHO05D007604 4.0e-50 202.2 182 58.2
Zm00001eb141830 Zea mays HOM05D006027 ORTHO05D007604 4.0e-50 202.2 114 83.3
Zm00001eb141870 Zea mays HOM05D006027 ORTHO05D007604 6.7e-50 201.4 182 60.4
BraA01t00872Z Brassica rapa HOM05D006027 ORTHO05D007604 1.1e-49 200.7 197 56.3
C07p56360 Brassica napus HOM05D006027 ORTHO05D007604 2.0e-49 199.9 184 58.7
BolC7t46115H Brassica oleracea HOM05D006027 ORTHO05D007604 2.0e-49 199.9 184 58.7
Sc05g0002880 Simmondsia chinensis HOM05D006027 ORTHO05D007604 3.3e-49 199.1 168 64.9
unitig_8.g3074 Utricularia gibba HOM05D006027 ORTHO05D007604 5.7e-49 198.4 183 60.1
HPP92_008468 Vanilla planifolia HOM05D006027 ORTHO05D007604 1.3e-48 197.2 183 56.3
BolC1t01050H Brassica oleracea HOM05D000022 ORTHO05D000744 1.7e-48 196.8 176 59.1
THA.LOC104820068 Tarenaya hassleriana HOM05D006027 ORTHO05D007604 4.8e-48 195.3 185 57.8
ATR0787G157 Amborella trichopoda HOM05D006027 ORTHO05D007604 9.1e-47 191.0 115 79.1
Mapoly0042s0085 Marchantia polymorpha HOM05D006027 ORTHO05D007604 4.2e-44 182.2 164 61.6
CiPaw.03G271300 Carya illinoinensis HOM05D006027 ORTHO05D007604 4.0e-42 175.6 181 56.9
Pp3c7_5450 Physcomitrium patens HOM05D006027 ORTHO05D007604 5.2e-42 175.3 196 50.0
AagrBONN_evm.TU.Sc2ySwM_340.224 Anthoceros agrestis HOM05D006027 ORTHO05D007604 2.2e-40 169.9 208 46.6
Pp3c11_18280 Physcomitrium patens HOM05D006027 ORTHO05D007604 6.3e-40 168.3 149 57.7
SMO347G0509 Selaginella moellendorffii HOM05D006027 ORTHO05D007604 8.3e-40 167.9 115 69.6
Ah.15g092630 Amaranthus hybridus HOM05D006027 ORTHO05D007604 1.2e-35 154.1 110 71.8
CBR_g12742 Chara braunii HOM05D006027 ORTHO05D007604 2.7e-35 152.9 110 60.9
Cre10.g440450 Chlamydomonas reinhardtii HOM05D006027 ORTHO05D007604 1.0e-34 151.0 108 62.0
MCO16G336 Micromonas commoda HOM05D006027 ORTHO05D007604 4.0e-34 149.1 106 62.3
PRCOL_00005949 Prasinoderma coloniale HOM05D006027 ORTHO05D007604 6.8e-34 148.3 107 60.7
CSS0017427 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 4.0e-26 122.5 171 46.8
Zm00001eb141750 Zea mays HOM05D006027 ORTHO05D007604 5.9e-22 108.6 59 83.1
Zm00001eb141790 Zea mays HOM05D006027 ORTHO05D007604 5.9e-22 108.6 59 83.1
RcHm_v2.0_Chr6g0286561 Rosa chinensis HOM05D006027 ORTHO05D007604 7.8e-22 108.2 103 60.2
TAR362G0025 Trochodendron aralioides HOM05D006027 ORTHO05D007604 5.8e-17 92.0 64 70.3
CDE09G0356 Ceratophyllum demersum HOM05D006027 ORTHO05D007604 4.6e-14 82.4 107 50.5
Zm00001eb141760 Zea mays HOM05D006027 ORTHO05D007604 7.8e-14 81.6 52 73.1


User provided reference genes

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