Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000845g0040 Nicotiana tabacum HOM05D007808 ORTHO05D009895 4.8e-241 837.4 419 100.0
Nitab4.5_0010039g0030 Nicotiana tabacum HOM05D007808 ORTHO05D009895 1.0e-190 670.2 452 77.4
Peaxi162Scf00415g00913 Petunia axillaris HOM05D007808 ORTHO05D009895 4.3e-173 611.7 441 71.9
Solyc09g072860.2 Solanum lycopersicum HOM05D007808 ORTHO05D009895 1.0e-171 607.1 445 71.2
Sopen09g028660 Solanum pennellii HOM05D007808 ORTHO05D009895 4.0e-171 605.1 445 71.2
Lj2C1144T6 Lonicera japonica HOM05D007808 ORTHO05D009895 5.9e-98 362.1 446 43.3
Hma1.2p1_0273F.1_g109280 Hydrangea macrophylla HOM05D007808 ORTHO05D009895 2.6e-90 336.7 445 43.4
Actinidia37545 Actinidia chinensis HOM05D007808 ORTHO05D009895 3.4e-90 336.3 448 42.9
CAN.G1395.2 Capsicum annuum HOM05D007808 ORTHO05D009895 1.4e-88 330.9 318 59.1
SalBow4G3111 Salvia bowleyana HOM05D007808 ORTHO05D009895 8.0e-87 325.1 443 41.8
Migut.D00468 Erythranthe guttata HOM05D007808 ORTHO05D009895 3.0e-86 323.2 449 42.1
SGA_v2.0_scaffold1G00644 Striga asiatica HOM05D007808 ORTHO05D009895 2.6e-85 320.1 390 43.6
QL09p041160 Quercus lobata HOM05D007808 ORTHO05D009895 7.4e-85 318.5 445 40.7
CANSAT01G0990 Cannabis sativa HOM05D007808 ORTHO05D009895 2.6e-82 310.1 449 40.3
RcHm_v2.0_Chr6g0286881 Rosa chinensis HOM05D007808 ORTHO05D009895 2.6e-82 310.1 446 39.5
TAR633G0330 Trochodendron aralioides HOM05D007808 ORTHO05D009895 3.8e-81 306.2 476 39.5
HanXRQChr04g0111341 Helianthus annuus HOM05D007808 ORTHO05D009895 8.5e-81 305.1 441 40.1
Oeu039657.1 Olea europaea HOM05D007808 ORTHO05D009895 8.5e-81 305.1 487 36.8
GSVIVG01028406001 Vitis vinifera HOM05D007808 ORTHO05D009895 9.4e-80 301.6 443 38.4
DCAR_018515 Daucus carota HOM05D007808 ORTHO05D009895 1.2e-79 301.2 429 39.6
Thecc.01G251900 Theobroma cacao HOM05D007808 ORTHO05D009895 8.0e-79 298.5 450 38.9
FvH4_2g20710 Fragaria vesca HOM05D007808 ORTHO05D009895 1.4e-78 297.7 452 38.7
Prupe.8G216500 Prunus persica HOM05D007808 ORTHO05D009895 1.4e-78 297.7 447 39.6
Ciclev10020041m.g Citrus clementina HOM05D007808 ORTHO05D009895 3.0e-78 296.6 448 38.4
Cc01_g17900 Coffea canephora HOM05D007808 ORTHO05D009895 6.7e-78 295.4 446 40.6
FAN20G2653 Fragaria x ananassa HOM05D007808 ORTHO05D009895 2.6e-77 293.5 445 38.7
FAN27G2486 Fragaria x ananassa HOM05D007808 ORTHO05D009895 2.6e-77 293.5 445 38.7
Aqoxy5G00155 Aquilegia oxysepala HOM05D007808 ORTHO05D009895 7.5e-77 292.0 449 38.5
Potri.014G192200 Populus trichocarpa HOM05D007808 ORTHO05D009895 1.7e-76 290.8 448 38.8
Duzib138G1393 Durio zibethinus HOM05D007808 ORTHO05D009895 4.8e-76 289.3 460 37.4
MBI10_g30718_MAGBIO Magnolia biondii HOM05D007808 ORTHO05D009895 7.0e-75 285.4 466 39.7
Manes.13G040600 Manihot esculenta HOM05D007808 ORTHO05D009895 7.0e-75 285.4 448 35.5
PSO832G1361 Papaver somniferum HOM05D007808 ORTHO05D009895 7.0e-75 285.4 445 38.2
Atru.chr5.1818 Acer truncatum HOM05D007808 ORTHO05D009895 9.1e-75 285.0 451 37.9
Gohir.D07G157600 Gossypium hirsutum HOM05D007808 ORTHO05D009895 1.6e-74 284.3 448 36.6
Nn1g02938 Nelumbo nucifera HOM05D007808 ORTHO05D009895 5.9e-74 282.3 475 36.0
Gohir.A07G151000 Gossypium hirsutum HOM05D007808 ORTHO05D009895 1.7e-73 280.8 448 36.6
FAN15G3261 Fragaria x ananassa HOM05D007808 ORTHO05D009895 2.2e-73 280.4 429 38.7
COL.COLO4_10584 Corchorus olitorius HOM05D007808 ORTHO05D009895 3.8e-73 279.6 468 36.8
CSS0017675 Camellia sinensis var. sinensis HOM05D007808 ORTHO05D009895 2.7e-71 273.5 372 42.7
CSS0046569 Camellia sinensis var. sinensis HOM05D007808 ORTHO05D009895 2.7e-71 273.5 372 43.0
TWI18G1304 Tripterygium wilfordii HOM05D007808 ORTHO05D009895 4.7e-71 272.7 475 36.2
FAN24G0750 Fragaria x ananassa HOM05D007808 ORTHO05D009895 6.8e-70 268.9 427 37.7
Gorai.001G180500 Gossypium raimondii HOM05D007808 ORTHO05D009895 3.5e-66 256.5 406 37.4
PGR031G1809 Punica granatum HOM05D007808 ORTHO05D009895 4.5e-66 256.1 444 34.9
AL8G16070 Arabidopsis lyrata HOM05D007808 ORTHO05D009895 1.0e-65 255.0 445 35.1
Carub.0008s0453 Capsella rubella HOM05D007808 ORTHO05D009895 6.5e-65 252.3 442 35.3
PSO764G0215 Papaver somniferum HOM05D007808 ORTHO05D009895 4.2e-64 249.6 412 37.6
A09p20750 Brassica napus HOM05D007808 ORTHO05D009895 3.0e-62 243.4 443 35.0
AT5G44010 Arabidopsis thaliana HOM05D007808 ORTHO05D009895 5.2e-62 242.7 445 34.6
BraA09t37679Z Brassica rapa HOM05D007808 ORTHO05D009895 1.2e-61 241.5 443 34.8
BcaB07g30982 Brassica carinata HOM05D007808 ORTHO05D009895 1.5e-61 241.1 418 37.8
Sc05g0003060 Simmondsia chinensis HOM05D007808 ORTHO05D009895 4.1e-59 233.0 357 39.5
ATR0736G152 Amborella trichopoda HOM05D007808 ORTHO05D009895 9.2e-59 231.9 450 35.3
BcaC04g21876 Brassica carinata HOM05D007808 ORTHO05D009895 1.6e-58 231.1 412 36.4
C09p26260 Brassica napus HOM05D007808 ORTHO05D009895 1.6e-58 231.1 412 36.4
CARHR179280 Cardamine hirsuta HOM05D007808 ORTHO05D009895 3.5e-58 229.9 406 35.5
Lsat_1_v5_gn_8_92100 Lactuca sativa HOM05D007808 ORTHO05D009895 6.6e-57 225.7 414 35.0
THA.LOC104801132 Tarenaya hassleriana HOM05D007808 ORTHO05D009895 5.2e-54 216.1 436 32.3
Eucgr.A01321 Eucalyptus grandis HOM05D007808 ORTHO05D009895 2.9e-52 210.3 365 35.9
Sabra14G0143900 Salix brachista HOM05D007808 ORTHO05D009895 1.6e-50 204.5 326 38.0
BolC9t55528H Brassica oleracea HOM05D007808 ORTHO05D009895 3.5e-50 203.4 372 36.3
Thhalv10003421m.g Eutrema salsugineum HOM05D007808 ORTHO05D009895 1.1e-48 198.4 412 32.5
CiPaw.04G189500 Carya illinoinensis HOM05D007808 ORTHO05D009895 4.4e-45 186.4 199 47.2
BcaC04g21877 Brassica carinata HOM05D007808 ORTHO05D009895 3.7e-44 183.3 356 34.6
Os02g0814600 Oryza sativa ssp. japonica HOM05D007808 ORTHO05D009895 2.4e-43 180.6 426 30.8
HPP92_025831 Vanilla planifolia HOM05D007808 ORTHO05D009895 4.1e-43 179.9 451 29.5
Zm00001eb191560 Zea mays HOM05D007808 ORTHO05D009895 4.7e-39 166.4 420 28.1
Haze_24684 Corylus avellana HOM05D007808 ORTHO05D009895 2.5e-32 144.1 242 34.3
Cpa.g.sc87.15 Carica papaya HOM05D007808 ORTHO05D009895 3.6e-31 140.2 248 35.5
ECA236G2323 Erigeron canadensis HOM05D000728 ORTHO05D001586 6.4e-28 129.4 218 37.6
Gorai.002G091900 Gossypium raimondii HOM05D007808 ORTHO05D009895 2.5e-24 117.5 210 35.7
CDE02G3651 Ceratophyllum demersum HOM05D007808 ORTHO05D009895 4.9e-20 103.2 264 29.5
PGSC0003DMG400003825 Solanum tuberosum HOM05D007808 ORTHO05D009895 4.9e-20 103.2 57 84.2
Sp2g08850 Schrenkiella parvula HOM05D007808 ORTHO05D009895 4.2e-19 100.1 202 33.7
CiPaw.04G189400 Carya illinoinensis HOM05D007808 ORTHO05D009895 2.1e-15 87.8 105 45.7
FAN27G0174 Fragaria x ananassa HOM05D007808 ORTHO05D009895 7.6e-13 79.3 54 59.3
CANSAT56G3388 Cannabis sativa HOM05D007808 ORTHO05D009895 5.4e-11 73.2 51 60.8
Gohir.D11G218200 Gossypium hirsutum HOM05D007808 ORTHO05D009895 7.9e-10 69.3 138 33.3
AagrBONN_evm.TU.Sc2ySwM_117.2846 Anthoceros agrestis HOM05D007808 ORTHO05D009895 2.3e-09 67.8 419 19.8
SEGI_27571 Sequoiadendron giganteum HOM05D007808 ORTHO05D009895 8.1e-07 59.3 216 24.1


User provided reference genes

Program Settings