Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000845g0010 Nicotiana tabacum HOM05D004457 ORTHO05D005282 3.6e-91 338.2 168 100.0
Nitab4.5_0004268g0020 Nicotiana tabacum HOM05D004457 ORTHO05D005282 9.0e-58 227.3 180 71.7
Nitab4.5_0000338g0060 Nicotiana tabacum HOM05D004457 ORTHO05D005282 1.0e-32 144.1 119 67.2
Peaxi162Scf00133g00612 Petunia axillaris HOM05D004457 ORTHO05D005282 3.6e-30 135.6 126 61.9
CSS0031792 Camellia sinensis var. sinensis HOM05D004457 ORTHO05D005282 1.6e-25 120.2 169 45.6
CSS0048555 Camellia sinensis var. sinensis HOM05D004457 ORTHO05D005282 1.6e-25 120.2 169 45.6
Ciclev10021193m.g Citrus clementina HOM05D004457 ORTHO05D005282 3.5e-25 119.0 165 44.2
FAN28G1138 Fragaria x ananassa HOM05D004457 ORTHO05D005282 5.9e-25 118.2 161 44.7
CiPaw.06G035200 Carya illinoinensis HOM05D004457 ORTHO05D005282 1.3e-24 117.1 120 54.2
Prupe.2G328100 Prunus persica HOM05D004457 ORTHO05D005282 1.7e-24 116.7 166 43.4
Actinidia34324 Actinidia chinensis HOM05D004457 ORTHO05D005282 3.8e-24 115.5 118 55.9
Manes.09G128300 Manihot esculenta HOM05D004457 ORTHO05D005282 1.1e-23 114.0 166 43.4
Cc02_g00170 Coffea canephora HOM05D004457 ORTHO05D005282 1.5e-23 113.6 169 42.6
CAN.G1131.28 Capsicum annuum HOM05D004457 ORTHO05D005282 2.5e-23 112.8 120 54.2
Dinv29138 Davidia involucrata HOM05D004457 ORTHO05D005282 3.2e-23 112.5 166 42.2
RcHm_v2.0_Chr1g0384491 Rosa chinensis HOM05D004457 ORTHO05D005282 4.2e-23 112.1 120 51.7
Thecc.05G219000 Theobroma cacao HOM05D004457 ORTHO05D005282 4.2e-23 112.1 120 53.3
FvH4_7g34140 Fragaria vesca HOM05D004457 ORTHO05D005282 5.5e-23 111.7 120 51.7
FAN03G1923 Fragaria x ananassa HOM05D004457 ORTHO05D005282 5.5e-23 111.7 120 51.7
Actinidia08758 Actinidia chinensis HOM05D004457 ORTHO05D005282 7.2e-23 111.3 169 42.6
Nitab4.5_0004530g0100 Nicotiana tabacum HOM05D004457 ORTHO05D005282 7.2e-23 111.3 120 53.3
Sabra13G0073500 Salix brachista HOM05D004457 ORTHO05D005282 7.2e-23 111.3 141 46.8
CSS0037309 Camellia sinensis var. sinensis HOM05D004457 ORTHO05D005282 9.4e-23 110.9 120 52.5
CSS0045385 Camellia sinensis var. sinensis HOM05D004457 ORTHO05D005282 9.4e-23 110.9 120 52.5
Lj1A1034G49 Lonicera japonica HOM05D004457 ORTHO05D005282 9.4e-23 110.9 120 51.7
FAN10G1543 Fragaria x ananassa HOM05D004457 ORTHO05D005282 1.2e-22 110.5 120 50.8
Atru.chr12.1918 Acer truncatum HOM05D004457 ORTHO05D005282 1.6e-22 110.2 119 52.9
Eucgr.K00073 Eucalyptus grandis HOM05D004457 ORTHO05D005282 1.6e-22 110.2 167 43.7
Nitab4.5_0000021g0740 Nicotiana tabacum HOM05D004457 ORTHO05D005282 1.6e-22 110.2 120 53.3
Rhsim03G0223200 Rhododendron simsii HOM05D004457 ORTHO05D005282 2.1e-22 109.8 120 49.2
CiPaw.05G214800 Carya illinoinensis HOM05D004457 ORTHO05D005282 3.6e-22 109.0 118 52.5
Gohir.D03G053500 Gossypium hirsutum HOM05D004457 ORTHO05D005282 3.6e-22 109.0 166 41.0
Hma1.2p1_0419F.1_g149440 Hydrangea macrophylla HOM05D004457 ORTHO05D005282 3.6e-22 109.0 166 40.4
Potri.013G079201 Populus trichocarpa HOM05D004457 ORTHO05D005282 3.6e-22 109.0 120 52.5
MD01G1237700 Malus domestica HOM05D004457 ORTHO05D005282 4.7e-22 108.6 167 41.9
TWI60G0869 Tripterygium wilfordii HOM05D004457 ORTHO05D005282 4.7e-22 108.6 167 41.9
C02p21100 Brassica napus HOM05D004457 ORTHO05D005282 6.1e-22 108.2 166 41.6
Cpa.g.sc43.116 Carica papaya HOM05D004457 ORTHO05D005282 6.1e-22 108.2 120 52.5
Peaxi162Scf00516g00661 Petunia axillaris HOM05D004457 ORTHO05D005282 6.1e-22 108.2 120 52.5
PGR142G0056 Punica granatum HOM05D004457 ORTHO05D005282 6.1e-22 108.2 120 50.0
Potri.013G079101 Populus trichocarpa HOM05D004457 ORTHO05D005282 8.0e-22 107.8 120 50.8
Solyc03g097180.3 Solanum lycopersicum HOM05D004457 ORTHO05D005282 8.0e-22 107.8 120 51.7
Sopen03g027920 Solanum pennellii HOM05D004457 ORTHO05D005282 8.0e-22 107.8 120 51.7
PGSC0003DMG400003162 Solanum tuberosum HOM05D004457 ORTHO05D005282 8.0e-22 107.8 120 51.7
COL.COLO4_15192 Corchorus olitorius HOM05D004457 ORTHO05D005282 1.0e-21 107.5 120 51.7
Haze_00385 Corylus avellana HOM05D004457 ORTHO05D005282 1.0e-21 107.5 118 50.8
Glyma.11G009300 Glycine max HOM05D004457 ORTHO05D005282 1.4e-21 107.1 120 50.0
Lalb_Chr09g0320121 Lupinus albus HOM05D004457 ORTHO05D005282 1.4e-21 107.1 120 50.8
Gorai.003G055700 Gossypium raimondii HOM05D004457 ORTHO05D005282 1.8e-21 106.7 169 41.4
vmacro06531 Vaccinium macrocarpon HOM05D004457 ORTHO05D005282 2.3e-21 106.3 120 49.2
Glyma.01G233500 Glycine max HOM05D004457 ORTHO05D005282 3.0e-21 105.9 120 50.0
Cfa016064 Carpinus fangiana HOM05D004457 ORTHO05D005282 4.0e-21 105.5 118 50.0
CiPaw.06G035100 Carya illinoinensis HOM05D004457 ORTHO05D005282 4.0e-21 105.5 160 41.2
GSVIVG01024347001 Vitis vinifera HOM05D004457 ORTHO05D005282 5.2e-21 105.1 166 41.0
A02p12980 Brassica napus HOM05D004457 ORTHO05D005282 6.8e-21 104.8 172 40.1
VMungo1215G3184 Vigna mungo HOM05D004457 ORTHO05D005282 1.2e-20 104.0 132 46.2
Gohir.A02G127500 Gossypium hirsutum HOM05D004457 ORTHO05D005282 1.5e-20 103.6 120 50.0
arahy.Tifrunner.gnm1.ann1.9FAL4E Arachis hypogaea HOM05D004457 ORTHO05D005282 2.0e-20 103.2 120 48.3
arahy.Tifrunner.gnm1.ann1.R5JYMV Arachis hypogaea HOM05D004457 ORTHO05D005282 2.0e-20 103.2 120 48.3
Gohir.D08G241200 Gossypium hirsutum HOM05D004457 ORTHO05D005282 2.6e-20 102.8 120 46.7
Gorai.004G256600 Gossypium raimondii HOM05D004457 ORTHO05D005282 2.6e-20 102.8 120 46.7
TAR375G0461 Trochodendron aralioides HOM05D004457 ORTHO05D005282 3.4e-20 102.4 130 47.7
AT1G65020 Arabidopsis thaliana HOM05D004457 ORTHO05D005282 7.5e-20 101.3 165 40.0
MD07G1310300 Malus domestica HOM05D004457 ORTHO05D005282 1.3e-19 100.5 120 46.7
DCAR_020421 Daucus carota HOM05D004457 ORTHO05D005282 1.7e-19 100.1 119 47.9
Sc13g0010930 Simmondsia chinensis HOM05D004457 ORTHO05D005282 1.7e-19 100.1 120 47.5
AL2G19640 Arabidopsis lyrata HOM05D004457 ORTHO05D005282 2.8e-19 99.4 165 39.4
Gohir.A08G221660 Gossypium hirsutum HOM05D004457 ORTHO05D005282 2.8e-19 99.4 120 45.8
Aqoxy3G02297 Aquilegia oxysepala HOM05D004457 ORTHO05D005282 3.7e-19 99.0 120 50.0
Oeu062823.1 Olea europaea HOM05D004457 ORTHO05D005282 3.7e-19 99.0 120 49.2
Phvul.002G041000 Phaseolus vulgaris HOM05D004457 ORTHO05D005282 3.7e-19 99.0 119 47.1
Aa31LG2G2220 Aethionema arabicum HOM05D004457 ORTHO05D005282 8.3e-19 97.8 165 38.8
Nn6g33553 Nelumbo nucifera HOM05D004457 ORTHO05D005282 8.3e-19 97.8 118 46.6
Carub.0002s1019 Capsella rubella HOM05D004457 ORTHO05D005282 1.1e-18 97.4 153 40.5
Lsat_1_v5_gn_8_3720 Lactuca sativa HOM05D004457 ORTHO05D005282 2.4e-18 96.3 121 48.8
THA.LOC104805712 Tarenaya hassleriana HOM05D004457 ORTHO05D005282 2.4e-18 96.3 118 49.2
TPR.G37899 Trifolium pratense HOM05D004457 ORTHO05D005282 2.4e-18 96.3 120 47.5
Lj3A885T46 Lonicera japonica HOM05D004457 ORTHO05D005282 3.1e-18 95.9 121 46.3
Thhalv10022467m.g Eutrema salsugineum HOM05D004457 ORTHO05D005282 4.1e-18 95.5 165 38.8
PSO063G5530 Papaver somniferum HOM05D004457 ORTHO05D005282 4.1e-18 95.5 166 38.0
HanXRQChr04g0105271 Helianthus annuus HOM05D004457 ORTHO05D005282 5.4e-18 95.1 152 40.1
PSO782G5560 Papaver somniferum HOM05D004457 ORTHO05D005282 5.4e-18 95.1 166 38.0
Psat2g189240 Pisum sativum HOM05D004457 ORTHO05D005282 7.0e-18 94.7 120 46.7
EL10Ac3g05054 Beta vulgaris HOM05D004457 ORTHO05D005282 9.2e-18 94.4 120 45.0
CARHR056470 Cardamine hirsuta HOM05D004457 ORTHO05D005282 9.2e-18 94.4 165 37.6
Sed0007489 Sechium edule HOM05D004457 ORTHO05D005282 1.2e-17 94.0 118 46.6
AUR62028201 Chenopodium quinoa HOM05D004457 ORTHO05D005282 1.6e-17 93.6 120 43.3
SalBow4G0372 Salvia bowleyana HOM05D004457 ORTHO05D005282 4.5e-17 92.0 118 47.5
SalBow4G0893 Salvia bowleyana HOM05D004457 ORTHO05D005282 4.5e-17 92.0 118 47.5
LjContig00222g0016666 Lotus japonicus HOM05D004457 ORTHO05D005282 5.9e-17 91.7 164 37.8
Medtr5g007360 Medicago truncatula HOM05D004457 ORTHO05D005282 7.7e-17 91.3 120 45.0
BraA02t06354Z Brassica rapa HOM05D004457 ORTHO05D005282 1.3e-16 90.5 166 36.1
Ca_24434_v3 Cicer arietinum L. HOM05D004457 ORTHO05D005282 1.3e-16 90.5 120 43.3
MSTRG.8 Avicennia marina HOM05D004457 ORTHO05D005282 1.7e-16 90.1 160 35.6
ClCG09G013130 Citrullus lanatus HOM05D004457 ORTHO05D005282 1.7e-16 90.1 118 44.9
SalBow2G1767 Salvia bowleyana HOM05D004457 ORTHO05D005282 2.3e-16 89.7 120 43.3
Sp5g19410 Schrenkiella parvula HOM05D004457 ORTHO05D005282 3.8e-16 89.0 166 35.5
Hund21100 Selenicereus undatus HOM05D004457 ORTHO05D005282 3.8e-16 89.0 120 43.3
BolC2t08250H Brassica oleracea HOM05D004457 ORTHO05D005282 5.0e-16 88.6 166 35.5
CsaV3_3G050090 Cucumis sativus L. HOM05D004457 ORTHO05D005282 8.6e-16 87.8 118 44.9
Migut.F00082 Erythranthe guttata HOM05D004457 ORTHO05D005282 8.6e-16 87.8 118 44.1
C06p38960 Brassica napus HOM05D004457 ORTHO05D005282 1.5e-15 87.0 119 43.7
BolC6t38988H Brassica oleracea HOM05D004457 ORTHO05D005282 1.5e-15 87.0 119 43.7
A07p32750 Brassica napus HOM05D004457 ORTHO05D005282 5.6e-15 85.1 119 42.9
ECA233G5338 Erigeron canadensis HOM05D004457 ORTHO05D005282 7.3e-15 84.7 119 46.2
SGA_v2.0_scaffold50G18449 Striga asiatica HOM05D004457 ORTHO05D005282 7.3e-15 84.7 118 42.4
unitig_90.g27538 Utricularia gibba HOM05D004457 ORTHO05D005282 7.3e-15 84.7 136 37.5
BraA07t30901Z Brassica rapa HOM05D004457 ORTHO05D005282 9.5e-15 84.3 119 42.9
BcaB05g25319 Brassica carinata HOM05D004457 ORTHO05D005282 1.2e-14 84.0 166 33.7
CiPaw.06G035000 Carya illinoinensis HOM05D004457 ORTHO05D005282 1.6e-14 83.6 118 42.4
SGA_v2.0_scaffold44G16903 Striga asiatica HOM05D004457 ORTHO05D005282 1.6e-14 83.6 120 40.8
Oeu015511.1 Olea europaea HOM05D004457 ORTHO05D005282 2.1e-14 83.2 119 43.7
MSTRG.26922 Avicennia marina HOM05D004457 ORTHO05D005282 2.8e-14 82.8 120 40.8
Sed0022448 Sechium edule HOM05D004457 ORTHO05D005282 3.6e-14 82.4 167 35.3
Zm00001eb024890 Zea mays HOM05D004457 ORTHO05D005282 1.8e-13 80.1 117 38.5
MELO3C021859.2 Cucumis melo HOM05D004457 ORTHO05D005282 3.0e-13 79.3 166 35.5
Haze_00386 Corylus avellana HOM05D004457 ORTHO05D005282 4.0e-13 79.0 120 41.7
CsaV3_2G036630 Cucumis sativus L. HOM05D004457 ORTHO05D005282 6.8e-13 78.2 165 33.3
PSO541G4777 Papaver somniferum HOM05D004457 ORTHO05D005282 6.8e-13 78.2 156 38.5
CDE02G1044 Ceratophyllum demersum HOM05D004457 ORTHO05D005282 1.2e-12 77.4 118 35.6
ClCG09G017170 Citrullus lanatus HOM05D004457 ORTHO05D005282 3.4e-12 75.9 166 34.3
Duzib106G1483 Durio zibethinus HOM05D004457 ORTHO05D005282 5.7e-12 75.1 52 73.1
FAN25G0067 Fragaria x ananassa HOM05D004457 ORTHO05D005282 1.3e-11 73.9 120 38.3
HPP92_001524 Vanilla planifolia HOM05D004457 ORTHO05D005282 1.3e-11 73.9 118 35.6
PSO675G5198 Papaver somniferum HOM05D004457 ORTHO05D005282 1.1e-10 70.9 156 35.9
FAN01G1413 Fragaria x ananassa HOM05D004457 ORTHO05D005282 1.8e-10 70.1 121 39.7
Actinidia28413 Actinidia chinensis HOM05D004457 ORTHO05D005282 2.4e-10 69.7 89 46.1
Cfa016063 Carpinus fangiana HOM05D004457 ORTHO05D005282 5.4e-10 68.6 129 38.8
QL09p022513 Quercus lobata HOM05D004457 ORTHO05D005282 1.2e-09 67.4 47 72.3
ATR0665G122 Amborella trichopoda HOM05D004457 ORTHO05D005282 1.6e-09 67.0 116 33.6
AUR62002084 Chenopodium quinoa HOM05D004457 ORTHO05D005282 2.0e-09 66.6 52 59.6
QL09p022526 Quercus lobata HOM05D004457 ORTHO05D005282 3.5e-09 65.9 41 75.6
Gohir.A08G102425 Gossypium hirsutum HOM05D004457 ORTHO05D005282 3.9e-08 62.4 101 37.6
SEGI_39651 Sequoiadendron giganteum HOM05D004457 ORTHO05D005282 1.1e-07 60.8 126 30.2
Hund09804 Selenicereus undatus HOM05D004457 ORTHO05D005282 3.3e-07 59.3 52 55.8


User provided reference genes

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