Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000842g0110 Nicotiana tabacum HOM05D006971 ORTHO05D009076 1.3e-210 736.1 375 100.0
Nitab4.5_0004704g0010 Nicotiana tabacum HOM05D006971 ORTHO05D009076 1.5e-206 722.6 372 98.7
PGSC0003DMG400019536 Solanum tuberosum HOM05D006971 ORTHO05D009076 1.1e-185 653.3 372 89.5
Solyc03g116110.3 Solanum lycopersicum HOM05D006971 ORTHO05D009076 1.5e-185 652.9 372 89.5
Sopen03g035080 Solanum pennellii HOM05D006971 ORTHO05D009076 5.7e-185 651.0 372 89.2
CAN.G837.13 Capsicum annuum HOM05D006971 ORTHO05D009076 9.0e-183 643.7 374 88.2
CSS0007636 Camellia sinensis var. sinensis HOM05D006971 ORTHO05D009076 9.1e-159 563.9 375 76.5
CSS0034788 Camellia sinensis var. sinensis HOM05D006971 ORTHO05D009076 9.1e-159 563.9 375 76.5
Actinidia04895 Actinidia chinensis HOM05D006971 ORTHO05D009076 1.2e-158 563.5 374 77.0
Dinv38707 Davidia involucrata HOM05D006971 ORTHO05D009076 5.9e-158 561.2 377 76.4
Rhsim08G0155400 Rhododendron simsii HOM05D006971 ORTHO05D009076 2.3e-154 549.3 375 75.2
CiPaw.11G044200 Carya illinoinensis HOM05D006971 ORTHO05D009076 4.1e-151 538.5 378 72.2
CANSAT80G1552 Cannabis sativa HOM05D006971 ORTHO05D009076 5.3e-151 538.1 376 72.3
Peaxi162Scf00274g00071 Petunia axillaris HOM05D006971 ORTHO05D009076 7.0e-151 537.7 299 90.0
Ciclev10020174m.g Citrus clementina HOM05D006971 ORTHO05D009076 1.7e-149 533.1 376 72.3
Lj9A463T31 Lonicera japonica HOM05D006971 ORTHO05D009076 1.7e-149 533.1 311 83.0
Ca_21824_v3 Cicer arietinum L. HOM05D006971 ORTHO05D009076 3.8e-149 531.9 370 72.2
Lj4g0026607 Lotus japonicus HOM05D006971 ORTHO05D009076 6.5e-149 531.2 372 71.8
Nn4g23158 Nelumbo nucifera HOM05D006971 ORTHO05D009076 1.5e-148 530.0 374 70.9
Medtr0493s0030 Medicago truncatula HOM05D006971 ORTHO05D009076 2.5e-148 529.3 372 72.0
QL10p016808 Quercus lobata HOM05D006971 ORTHO05D009076 4.2e-148 528.5 375 71.7
Psat4g051280 Pisum sativum HOM05D006971 ORTHO05D009076 4.7e-147 525.0 370 71.4
Oeu006511.1 Olea europaea HOM05D006971 ORTHO05D009076 1.0e-146 523.9 379 70.2
PGR083G0834 Punica granatum HOM05D006971 ORTHO05D009076 1.4e-146 523.5 376 72.3
Manes.06G092900 Manihot esculenta HOM05D006971 ORTHO05D009076 2.3e-146 522.7 376 71.8
TPR.G9261 Trifolium pratense HOM05D006971 ORTHO05D009076 3.0e-146 522.3 372 71.0
Lalb_Chr07g0178011 Lupinus albus HOM05D006971 ORTHO05D009076 5.2e-146 521.5 377 69.5
Cpa.g.sc111.5 Carica papaya HOM05D006971 ORTHO05D009076 1.5e-145 520.0 375 69.6
Prupe.5G193100 Prunus persica HOM05D006971 ORTHO05D009076 2.0e-145 519.6 371 70.9
MD14G1199800 Malus domestica HOM05D006971 ORTHO05D009076 2.6e-145 519.2 377 70.3
DCAR_016549 Daucus carota HOM05D006971 ORTHO05D009076 4.4e-145 518.5 365 72.9
Glyma.17G099600 Glycine max HOM05D006971 ORTHO05D009076 2.2e-144 516.2 365 70.4
MSTRG.4425 Avicennia marina HOM05D006971 ORTHO05D009076 2.8e-144 515.8 383 68.9
RcHm_v2.0_Chr7g0181351 Rosa chinensis HOM05D006971 ORTHO05D009076 2.8e-144 515.8 375 69.9
Eucgr.B00501 Eucalyptus grandis HOM05D006971 ORTHO05D009076 4.8e-144 515.0 339 74.0
Phvul.003G190500 Phaseolus vulgaris HOM05D006971 ORTHO05D009076 4.8e-144 515.0 336 75.0
VMungo1215G2247 Vigna mungo HOM05D006971 ORTHO05D009076 1.4e-143 513.5 365 70.4
Thecc.03G086400 Theobroma cacao HOM05D006971 ORTHO05D009076 7.0e-143 511.1 381 69.6
TWI15G1038 Tripterygium wilfordii HOM05D006971 ORTHO05D009076 9.1e-143 510.8 375 69.3
SalBow7G4263 Salvia bowleyana HOM05D006971 ORTHO05D009076 7.7e-142 507.7 382 70.2
FvH4_5g14981 Fragaria vesca HOM05D006971 ORTHO05D009076 1.0e-141 507.3 316 77.5
FAN18G2929 Fragaria x ananassa HOM05D006971 ORTHO05D009076 1.0e-141 507.3 316 77.5
Glyma.05G027100 Glycine max HOM05D006971 ORTHO05D009076 1.0e-141 507.3 373 69.4
GSVIVG01008006001 Vitis vinifera HOM05D006971 ORTHO05D009076 1.0e-141 507.3 377 69.2
Cc04_g16660 Coffea canephora HOM05D006971 ORTHO05D009076 6.6e-141 504.6 381 70.3
FAN04G0596 Fragaria x ananassa HOM05D006971 ORTHO05D009076 1.9e-140 503.1 420 64.0
HanXRQChr05g0158151 Helianthus annuus HOM05D006971 ORTHO05D009076 2.5e-140 502.7 372 69.9
CsaV3_1G005470 Cucumis sativus L. HOM05D006971 ORTHO05D009076 5.5e-140 501.5 374 67.6
MELO3C001980.2 Cucumis melo HOM05D006971 ORTHO05D009076 9.5e-140 500.7 374 67.4
Sed0024719 Sechium edule HOM05D006971 ORTHO05D009076 9.5e-140 500.7 374 67.9
PSO017G5818 Papaver somniferum HOM05D006971 ORTHO05D009076 1.2e-139 500.4 378 68.0
Aa31LG4G4870 Aethionema arabicum HOM05D006971 ORTHO05D009076 2.8e-139 499.2 370 66.5
arahy.Tifrunner.gnm1.ann1.NVD91E Arachis hypogaea HOM05D006971 ORTHO05D009076 3.6e-139 498.8 342 70.8
Migut.D01821 Erythranthe guttata HOM05D006971 ORTHO05D009076 3.6e-139 498.8 375 69.1
ECA246G1831 Erigeron canadensis HOM05D006971 ORTHO05D009076 2.3e-138 496.1 374 68.2
THA.LOC104808268 Tarenaya hassleriana HOM05D006971 ORTHO05D009076 3.0e-138 495.7 372 67.5
arahy.Tifrunner.gnm1.ann1.QE88UD Arachis hypogaea HOM05D006971 ORTHO05D009076 5.2e-138 495.0 380 66.6
Carub.0002s2143 Capsella rubella HOM05D006971 ORTHO05D009076 6.8e-138 494.6 371 66.6
COL.COLO4_28316 Corchorus olitorius HOM05D006971 ORTHO05D009076 1.5e-137 493.4 375 66.9
Aqoxy3G04167 Aquilegia oxysepala HOM05D006971 ORTHO05D009076 2.0e-137 493.0 339 72.3
AT1G74640 Arabidopsis thaliana HOM05D006971 ORTHO05D009076 4.4e-137 491.9 371 66.8
AL2G34520 Arabidopsis lyrata HOM05D006971 ORTHO05D009076 3.7e-136 488.8 371 66.6
MBI02_g41659_MAGBIO Magnolia biondii HOM05D006971 ORTHO05D009076 3.1e-135 485.7 373 67.8
FAN13G3185 Fragaria x ananassa HOM05D006971 ORTHO05D009076 4.1e-135 485.3 309 76.1
Potri.017G115100 Populus trichocarpa HOM05D006971 ORTHO05D009076 5.4e-135 485.0 346 68.8
Ah.02g113480 Amaranthus hybridus HOM05D006971 ORTHO05D009076 9.2e-135 484.2 357 68.6
SGA_v2.0_scaffold114G31906 Striga asiatica HOM05D006971 ORTHO05D009076 9.2e-135 484.2 380 66.3
Zm00001eb099580 Zea mays HOM05D006971 ORTHO05D009076 9.2e-135 484.2 334 70.7
CARHR067910 Cardamine hirsuta HOM05D006971 ORTHO05D009076 3.5e-134 482.3 310 73.9
AUR62008412 Chenopodium quinoa HOM05D006971 ORTHO05D009076 1.0e-133 480.7 345 69.9
Duzib205G0087 Durio zibethinus HOM05D006971 ORTHO05D009076 1.0e-133 480.7 370 67.0
TAR629G1638 Trochodendron aralioides HOM05D006971 ORTHO05D009076 1.7e-133 479.9 282 83.0
BcaB05g24862 Brassica carinata HOM05D006971 ORTHO05D009076 6.6e-133 478.0 361 66.5
Sp5g29760 Schrenkiella parvula HOM05D006971 ORTHO05D009076 6.6e-133 478.0 375 64.5
Gohir.A08G094100 Gossypium hirsutum HOM05D006971 ORTHO05D009076 2.5e-132 476.1 393 63.1
Sabra17G0095300 Salix brachista HOM05D006971 ORTHO05D009076 4.3e-132 475.3 348 67.8
BcaC03g15516 Brassica carinata HOM05D006971 ORTHO05D009076 1.0e-130 470.7 370 64.3
C02p31990 Brassica napus HOM05D006971 ORTHO05D009076 1.0e-130 470.7 370 64.3
Gorai.004G112200 Gossypium raimondii HOM05D006971 ORTHO05D009076 1.4e-130 470.3 410 60.7
A02p19460 Brassica napus HOM05D006971 ORTHO05D009076 2.3e-130 469.5 370 64.3
BraA02t06985Z Brassica rapa HOM05D006971 ORTHO05D009076 3.1e-130 469.2 372 63.4
Lsat_1_v5_gn_5_20140 Lactuca sativa HOM05D006971 ORTHO05D009076 8.9e-130 467.6 340 70.0
unitig_60.g25418 Utricularia gibba HOM05D006971 ORTHO05D009076 3.7e-128 462.2 327 69.4
ATR0564G273 Amborella trichopoda HOM05D006971 ORTHO05D009076 1.9e-127 459.9 373 62.5
FAN08G1158 Fragaria x ananassa HOM05D006971 ORTHO05D009076 2.4e-127 459.5 280 80.4
AUR62021684 Chenopodium quinoa HOM05D006971 ORTHO05D009076 7.3e-124 448.0 345 66.1
PSO478G0283 Papaver somniferum HOM05D006971 ORTHO05D009076 1.2e-123 447.2 280 76.8
CDE07G1445 Ceratophyllum demersum HOM05D006971 ORTHO05D009076 5.2e-122 441.8 370 58.1
EL10Ac5g11009 Beta vulgaris HOM05D006971 ORTHO05D009076 2.5e-116 422.9 489 50.7
Cfa018946 Carpinus fangiana HOM05D006971 ORTHO05D009076 2.0e-105 386.7 245 75.9
Hund02652 Selenicereus undatus HOM05D006971 ORTHO05D009076 1.1e-103 380.9 372 54.8
HPP92_002355 Vanilla planifolia HOM05D006971 ORTHO05D009076 2.3e-101 373.2 271 67.2
Pp3c23_920 Physcomitrium patens HOM05D006971 ORTHO05D009076 3.1e-98 362.8 330 55.5
Mapoly0071s0120 Marchantia polymorpha HOM05D006971 ORTHO05D009076 7.1e-95 351.7 321 53.3
Mapoly0229s0006 Marchantia polymorpha HOM05D006971 ORTHO05D009076 7.1e-95 351.7 321 53.3
vmacro17544 Vaccinium macrocarpon HOM05D006971 ORTHO05D009076 7.1e-95 351.7 206 84.5
Os09g0413700 Oryza sativa ssp. japonica HOM05D006971 ORTHO05D009076 1.6e-94 350.5 256 66.0
Gohir.D08G105301 Gossypium hirsutum HOM05D006971 ORTHO05D009076 4.6e-94 349.0 236 72.0
SMO111G0229 Selaginella moellendorffii HOM05D006971 ORTHO05D009076 9.9e-89 331.3 275 57.8
HPP92_002356 Vanilla planifolia HOM05D006971 ORTHO05D009076 1.8e-85 320.5 252 62.3
HPP92_027581 Vanilla planifolia HOM05D006971 ORTHO05D009076 5.0e-56 222.6 166 61.4
vmacro17545 Vaccinium macrocarpon HOM05D006971 ORTHO05D009076 3.8e-48 196.4 165 63.0
ClCG04G012280 Citrullus lanatus HOM05D006971 ORTHO05D009076 5.7e-44 182.6 170 55.3
Dinv19957 Davidia involucrata HOM05D006971 ORTHO05D009076 2.0e-41 174.1 125 73.6
AagrBONN_evm.TU.Sc2ySwM_368.527 Anthoceros agrestis HOM05D006971 ORTHO05D009076 1.9e-39 167.5 169 48.5
Thhalv10019619m.g Eutrema salsugineum HOM05D006971 ORTHO05D009076 3.5e-33 146.7 136 55.1
BcaB03g13848 Brassica carinata HOM05D006971 ORTHO05D009076 4.0e-29 133.3 150 49.3
Actinidia37630 Actinidia chinensis HOM05D000001 ORTHO05D008780 1.7e-27 127.9 85 77.6
SEGI_28088 Sequoiadendron giganteum HOM05D006971 ORTHO05D009076 2.0e-25 120.9 106 49.1
MD06G1192800 Malus domestica HOM05D006971 ORTHO05D009076 2.9e-19 100.5 84 61.9
HPP92_027582 Vanilla planifolia HOM05D006971 ORTHO05D009076 1.8e-18 97.8 133 43.6
A07p29310 Brassica napus HOM05D006971 ORTHO05D041645 1.5e-07 61.6 48 64.6
BraA07t30570Z Brassica rapa HOM05D006971 ORTHO05D041645 1.5e-07 61.6 48 64.6


User provided reference genes

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