Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000842g0050 Nicotiana tabacum HOM05D006541 ORTHO05D008471 1.6e-231 805.8 435 100.0
Nitab4.5_0012137g0020 Nicotiana tabacum HOM05D006541 ORTHO05D008471 2.7e-223 778.5 435 96.3
CAN.G837.10 Capsicum annuum HOM05D006541 ORTHO05D008471 1.1e-200 703.4 435 83.0
Peaxi162Scf00274g00732 Petunia axillaris HOM05D006541 ORTHO05D008471 4.2e-200 701.4 435 87.6
Sopen03g035110 Solanum pennellii HOM05D006541 ORTHO05D008471 3.5e-186 655.2 409 86.8
Solyc03g116140.3 Solanum lycopersicum HOM05D006541 ORTHO05D008471 1.0e-185 653.7 409 85.3
PGSC0003DMG400019513 Solanum tuberosum HOM05D006541 ORTHO05D008471 1.5e-176 623.2 409 85.1
Dinv38701 Davidia involucrata HOM05D006541 ORTHO05D008471 8.9e-158 560.8 436 67.0
Cc04_g16740 Coffea canephora HOM05D006541 ORTHO05D008471 2.1e-151 539.7 396 71.7
GSVIVG01008019001 Vitis vinifera HOM05D006541 ORTHO05D008471 3.4e-149 532.3 434 64.1
Oeu006508.1 Olea europaea HOM05D006541 ORTHO05D008471 9.9e-149 530.8 397 69.3
Duzib205G0457 Durio zibethinus HOM05D006541 ORTHO05D008471 4.2e-147 525.4 420 66.7
Lj5A111T86 Lonicera japonica HOM05D006541 ORTHO05D008471 1.6e-146 523.5 398 70.4
QL10p016702 Quercus lobata HOM05D006541 ORTHO05D008471 6.0e-146 521.5 448 61.4
VMungo1215G1397 Vigna mungo HOM05D006541 ORTHO05D008471 8.7e-145 517.7 447 63.5
Gohir.A03G066400 Gossypium hirsutum HOM05D006541 ORTHO05D008471 1.9e-144 516.5 420 66.0
TAR629G1448 Trochodendron aralioides HOM05D006541 ORTHO05D008471 1.3e-143 513.8 434 62.4
Atru.chr9.2260 Acer truncatum HOM05D006541 ORTHO05D008471 2.1e-143 513.1 419 65.2
Thecc.03G085100 Theobroma cacao HOM05D006541 ORTHO05D008471 4.8e-143 511.9 422 65.4
Cfa018953 Carpinus fangiana HOM05D006541 ORTHO05D008471 3.1e-142 509.2 433 63.3
Nn4g23149 Nelumbo nucifera HOM05D006541 ORTHO05D008471 4.0e-142 508.8 434 61.1
DCAR_016545 Daucus carota HOM05D006541 ORTHO05D008471 1.5e-141 506.9 400 66.5
Phvul.003G190700 Phaseolus vulgaris HOM05D006541 ORTHO05D008471 2.0e-141 506.5 447 62.9
Hma1.2p1_0104F.1_g049970 Hydrangea macrophylla HOM05D006541 ORTHO05D008471 7.6e-141 504.6 390 69.0
Gohir.D03G093000 Gossypium hirsutum HOM05D006541 ORTHO05D008471 9.9e-141 504.2 408 66.4
RcHm_v2.0_Chr7g0181151 Rosa chinensis HOM05D006541 ORTHO05D008471 1.7e-140 503.4 444 61.3
Eucgr.B00491 Eucalyptus grandis HOM05D006541 ORTHO05D008471 3.8e-140 502.3 439 61.0
Glyma.17G099300 Glycine max HOM05D006541 ORTHO05D008471 1.1e-139 500.7 447 61.3
Gorai.003G096900 Gossypium raimondii HOM05D006541 ORTHO05D008471 1.1e-139 500.7 453 61.4
Prupe.5G192200 Prunus persica HOM05D006541 ORTHO05D008471 1.9e-139 500.0 442 61.5
FAN04G2599 Fragaria x ananassa HOM05D006541 ORTHO05D008471 2.4e-139 499.6 443 60.5
Psat4g051480 Pisum sativum HOM05D006541 ORTHO05D008471 4.2e-139 498.8 443 60.7
FAN18G0374 Fragaria x ananassa HOM05D006541 ORTHO05D008471 7.1e-139 498.0 437 61.1
MSTRG.11386 Avicennia marina HOM05D006541 ORTHO05D008471 1.2e-138 497.3 394 66.5
PSO063G0566 Papaver somniferum HOM05D006541 ORTHO05D008471 4.6e-138 495.4 430 60.9
PGR083G1696 Punica granatum HOM05D006541 ORTHO05D008471 4.6e-138 495.4 440 62.7
FvH4_5g15050 Fragaria vesca HOM05D006541 ORTHO05D008471 3.0e-137 492.7 437 62.9
MBI05_g08285_MAGBIO Magnolia biondii HOM05D006541 ORTHO05D008471 5.1e-137 491.9 435 58.9
FAN08G2919 Fragaria x ananassa HOM05D006541 ORTHO05D008471 1.9e-136 490.0 443 60.0
Lalb_Chr07g0178001 Lupinus albus HOM05D006541 ORTHO05D008471 1.9e-136 490.0 404 65.1
SGA_v2.0_scaffold25G10913 Striga asiatica HOM05D006541 ORTHO05D008471 1.6e-135 486.9 405 65.9
TAR371G1054 Trochodendron aralioides HOM05D006541 ORTHO05D008471 1.6e-135 486.9 398 63.1
Ciclev10020397m.g Citrus clementina HOM05D006541 ORTHO05D008471 3.7e-135 485.7 426 60.8
Lj4g0004556 Lotus japonicus HOM05D006541 ORTHO05D008471 3.7e-135 485.7 418 63.4
MD14G1199100 Malus domestica HOM05D006541 ORTHO05D008471 1.8e-134 483.4 442 59.7
arahy.Tifrunner.gnm1.ann1.84ES4F Arachis hypogaea HOM05D006541 ORTHO05D008471 1.2e-133 480.7 444 58.6
Medtr4g108590 Medicago truncatula HOM05D006541 ORTHO05D008471 2.0e-133 479.9 441 58.5
Hund02657 Selenicereus undatus HOM05D006541 ORTHO05D008471 2.0e-133 479.9 435 59.5
arahy.Tifrunner.gnm1.ann1.ZY6HCY Arachis hypogaea HOM05D006541 ORTHO05D008471 3.4e-133 479.2 444 58.3
Migut.I00173 Erythranthe guttata HOM05D006541 ORTHO05D008471 2.2e-132 476.5 398 64.1
Lsat_1_v5_gn_1_13281 Lactuca sativa HOM05D006541 ORTHO05D008471 2.2e-132 476.5 398 63.6
CiPaw.11G043400 Carya illinoinensis HOM05D006541 ORTHO05D008471 3.8e-132 475.7 396 64.1
AUR62021701 Chenopodium quinoa HOM05D006541 ORTHO05D008471 3.8e-132 475.7 432 59.7
Aqoxy3G03367 Aquilegia oxysepala HOM05D006541 ORTHO05D008471 6.4e-132 474.9 435 59.3
Ca_21826_v3 Cicer arietinum L. HOM05D006541 ORTHO05D008471 8.4e-132 474.6 449 57.7
Rhsim08G0155500 Rhododendron simsii HOM05D006541 ORTHO05D008471 2.5e-131 473.0 379 67.0
TPR.G34732 Trifolium pratense HOM05D006541 ORTHO05D008471 4.2e-131 472.2 446 57.6
AUR62008395 Chenopodium quinoa HOM05D006541 ORTHO05D008471 7.1e-131 471.5 433 59.6
HanXRQChr02g0041061 Helianthus annuus HOM05D006541 ORTHO05D008471 2.1e-130 469.9 398 62.8
THA.LOC104821445 Tarenaya hassleriana HOM05D006541 ORTHO05D008471 2.1e-130 469.9 436 57.3
TWI60G0844 Tripterygium wilfordii HOM05D006541 ORTHO05D008471 3.0e-129 466.1 419 60.6
CANSAT25G3319 Cannabis sativa HOM05D006541 ORTHO05D008471 3.9e-129 465.7 435 62.3
MD06G1192400 Malus domestica HOM05D006541 ORTHO05D008471 5.7e-128 461.8 473 56.2
Haze_07335 Corylus avellana HOM05D006541 ORTHO05D008471 3.7e-127 459.1 400 63.0
AL5G26900 Arabidopsis lyrata HOM05D006541 ORTHO05D008471 6.2e-127 458.4 434 58.3
CSS0004518 Camellia sinensis var. sinensis HOM05D006541 ORTHO05D008471 1.1e-126 457.6 435 57.9
Actinidia37633 Actinidia chinensis HOM05D006541 ORTHO05D008471 9.0e-126 454.5 404 62.1
CSS0042048 Camellia sinensis var. sinensis HOM05D006541 ORTHO05D008471 1.5e-125 453.8 412 61.7
AT3G47610 Arabidopsis thaliana HOM05D006541 ORTHO05D008471 2.0e-125 453.4 434 57.6
ECA247G0129 Erigeron canadensis HOM05D006541 ORTHO05D008471 1.3e-124 450.7 397 59.4
Sc12g0006320 Simmondsia chinensis HOM05D006541 ORTHO05D008471 2.2e-124 449.9 431 56.6
Carub.0005s1374 Capsella rubella HOM05D006541 ORTHO05D008471 5.5e-123 445.3 434 56.5
Thhalv10010423m.g Eutrema salsugineum HOM05D006541 ORTHO05D008471 9.3e-123 444.5 436 56.0
Ah.11g048540 Amaranthus hybridus HOM05D006541 ORTHO05D008471 1.2e-122 444.1 433 57.5
CARHR156290 Cardamine hirsuta HOM05D006541 ORTHO05D008471 1.2e-122 444.1 435 56.6
Sp5g14300 Schrenkiella parvula HOM05D006541 ORTHO05D008471 1.2e-122 444.1 434 56.2
CDE06G2127 Ceratophyllum demersum HOM05D006541 ORTHO05D008471 4.6e-122 442.2 443 54.2
BcaB01g00902 Brassica carinata HOM05D006541 ORTHO05D008471 7.9e-122 441.4 399 60.2
EL10Ac5g10987 Beta vulgaris HOM05D006541 ORTHO05D008471 1.1e-120 437.6 401 59.9
BolC3t19470H Brassica oleracea HOM05D006541 ORTHO05D008471 1.9e-120 436.8 434 55.8
A06p20010 Brassica napus HOM05D006541 ORTHO05D008471 3.3e-120 436.0 434 56.9
BraA06t25087Z Brassica rapa HOM05D006541 ORTHO05D008471 3.3e-120 436.0 434 56.9
HPP92_016797 Vanilla planifolia HOM05D006541 ORTHO05D008471 7.4e-120 434.9 431 55.2
ClCG04G012330 Citrullus lanatus HOM05D006541 ORTHO05D008471 2.2e-119 433.3 389 60.9
COL.COLO4_24520 Corchorus olitorius HOM05D000087 ORTHO05D008471 4.8e-119 432.2 402 60.9
Sabra12G0049100 Salix brachista HOM05D006541 ORTHO05D008471 4.8e-119 432.2 479 52.6
unitig_0.g2528 Utricularia gibba HOM05D006541 ORTHO05D008471 4.8e-119 432.2 392 59.9
HPP92_016827 Vanilla planifolia HOM05D006541 ORTHO05D008471 4.8e-119 432.2 431 55.0
BcaC01g01798 Brassica carinata HOM05D006541 ORTHO05D008471 2.4e-118 429.9 434 55.3
C03p71820 Brassica napus HOM05D006541 ORTHO05D008471 2.4e-118 429.9 434 55.3
Potri.012G068900 Populus trichocarpa HOM05D006541 ORTHO05D008471 9.0e-118 427.9 394 62.9
MELO3C001974.2 Cucumis melo HOM05D006541 ORTHO05D008471 2.7e-114 416.4 384 59.6
CsaV3_1G005390 Cucumis sativus L. HOM05D006541 ORTHO05D008471 6.1e-114 415.2 352 63.4
Hma1.2p1_0104F.1_g049980 Hydrangea macrophylla HOM05D006541 ORTHO05D008471 2.3e-113 413.3 346 64.5
ATR0598G034 Amborella trichopoda HOM05D006541 ORTHO05D008471 2.0e-112 410.2 395 55.4
Cpa.g.c35819 Carica papaya HOM05D006541 ORTHO05D008471 4.3e-112 409.1 393 58.0
Sed0004898 Sechium edule HOM05D006541 ORTHO05D008471 9.7e-112 407.9 356 65.4
BcaB05g23063 Brassica carinata HOM05D006541 ORTHO05D008471 9.1e-110 401.4 428 51.9
Manes.06G093400 Manihot esculenta HOM05D006541 ORTHO05D008471 1.4e-107 394.0 357 59.9
vmacro17549 Vaccinium macrocarpon HOM05D006541 ORTHO05D008471 1.1e-99 367.9 423 52.0
Aa31LG4G16360 Aethionema arabicum HOM05D006541 ORTHO05D008471 2.8e-95 353.2 472 45.8
Actinidia04898 Actinidia chinensis HOM05D006541 ORTHO05D008471 1.4e-94 350.9 263 70.0
Zm00001eb312480 Zea mays HOM05D006541 ORTHO05D008471 2.0e-88 330.5 316 61.4
Pp3c16_180 Physcomitrium patens HOM05D006541 ORTHO05D003603 5.4e-78 295.8 452 40.7
Pp3c16_188 Physcomitrium patens HOM05D006541 ORTHO05D003603 5.4e-78 295.8 452 40.7
SEGI_30902 Sequoiadendron giganteum HOM05D006541 ORTHO05D008471 8.6e-76 288.5 418 41.9
Mapoly0060s0059 Marchantia polymorpha HOM05D006541 ORTHO05D003603 9.5e-75 285.0 444 40.1
AagrBONN_evm.TU.Sc2ySwM_228.4960 Anthoceros agrestis HOM05D006541 ORTHO05D008471 6.1e-74 282.3 393 44.5
Potri.003G168100 Populus trichocarpa HOM05D006541 ORTHO05D008471 1.0e-65 255.0 157 80.3
CBR_g8828 Chara braunii HOM05D003341 ORTHO05D003603 6.6e-36 156.0 406 30.8
Cpa.g.sc111.3 Carica papaya HOM05D006541 ORTHO05D008471 1.3e-31 141.7 134 56.0
Actinidia04899 Actinidia chinensis HOM05D006541 ORTHO05D008471 1.7e-31 141.4 122 59.8
Os09g0413100 Oryza sativa ssp. japonica HOM05D006541 ORTHO05D008471 4.2e-30 136.7 183 44.3
SEGI_16548 Sequoiadendron giganteum HOM05D003341 ORTHO05D003603 1.1e-27 128.6 352 30.1
Sed0007979 Sechium edule HOM05D006541 ORTHO05D008471 7.4e-19 99.4 88 55.7
Cre09.g412350 Chlamydomonas reinhardtii HOM05D003341 ORTHO05D003603 2.0e-16 91.3 167 35.3
PRCOL_00002459 Prasinoderma coloniale HOM05D006541 ORTHO05D008471 1.4e-14 85.1 141 37.6
vmacro17551 Vaccinium macrocarpon HOM05D006541 ORTHO05D000277 7.9e-13 79.3 50 72.0
Haze_07334 Corylus avellana HOM05D006541 ORTHO05D008471 8.7e-12 75.9 52 65.4
MELO3C035773.2 Cucumis melo HOM05D006541 ORTHO05D008471 1.1e-11 75.5 50 70.0
CsaV3_1G005410 Cucumis sativus L. HOM05D006541 ORTHO05D008471 1.1e-11 75.5 50 70.0
FAN09G1066 Fragaria x ananassa HOM05D007752 ORTHO05D009994 6.9e-09 66.2 88 47.7
SEGI_20393 Sequoiadendron giganteum HOM05D006541 ORTHO05D008471 2.2e-07 61.2 46 63.0
Cfa027053 Carpinus fangiana HOM05D006541 ORTHO05D124901 8.4e-07 59.3 303 23.4
MBI05_g08284_MAGBIO Magnolia biondii HOM05D006541 ORTHO05D008471 1.9e-06 58.2 77 39.0
FAN14G0637 Fragaria x ananassa HOM05D006541 ORTHO05D008471 7.2e-06 56.2 88 44.3


User provided reference genes

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