Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000841g0080 Nicotiana tabacum HOM05D000780 ORTHO05D009033 3.8e-160 568.2 294 100.0
Nitab4.5_0003148g0030 Nicotiana tabacum HOM05D000780 ORTHO05D009033 2.1e-150 535.8 299 94.0
Solyc04g050470.4 Solanum lycopersicum HOM05D000780 ORTHO05D009033 3.1e-114 415.6 309 75.1
Migut.F02052 Erythranthe guttata HOM05D000780 ORTHO05D009033 1.3e-91 340.5 288 64.6
Hma1.2p1_0130F.1_g060510 Hydrangea macrophylla HOM05D000780 ORTHO05D009033 2.2e-91 339.7 301 61.8
Gohir.D13G172200 Gossypium hirsutum HOM05D000780 ORTHO05D009033 4.1e-90 335.5 309 61.5
Gorai.013G188500 Gossypium raimondii HOM05D000780 ORTHO05D009033 7.0e-90 334.7 309 61.5
Gohir.A13G161800 Gossypium hirsutum HOM05D000780 ORTHO05D009033 1.6e-89 333.6 315 59.7
MSTRG.27431 Avicennia marina HOM05D000780 ORTHO05D009033 4.6e-89 332.0 258 67.4
Thecc.05G266300 Theobroma cacao HOM05D000780 ORTHO05D009033 1.0e-88 330.9 261 66.3
CSS0005756 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D009033 1.3e-88 330.5 305 63.3
Duzib177G0863 Durio zibethinus HOM05D000780 ORTHO05D009033 1.3e-88 330.5 292 62.7
SalBow1G6873 Salvia bowleyana HOM05D000780 ORTHO05D009033 1.7e-88 330.1 282 64.2
Atru.chr2.1117 Acer truncatum HOM05D000780 ORTHO05D009033 2.3e-88 329.7 294 61.6
GSVIVG01026324001 Vitis vinifera HOM05D000780 ORTHO05D009033 3.9e-88 328.9 313 60.7
Glyma.20G221500 Glycine max HOM05D000780 ORTHO05D009033 7.3e-87 324.7 293 60.1
Actinidia06831 Actinidia chinensis HOM05D000780 ORTHO05D009033 9.5e-87 324.3 319 59.6
Ciclev10021307m.g Citrus clementina HOM05D000780 ORTHO05D009033 6.8e-85 318.2 274 62.0
Peaxi162Scf00077g00138 Petunia axillaris HOM05D000780 ORTHO05D009033 6.8e-85 318.2 224 78.6
Nn1g03021 Nelumbo nucifera HOM05D000780 ORTHO05D009033 1.5e-84 317.0 304 58.9
Ca_09986_v3 Cicer arietinum L. HOM05D000780 ORTHO05D009033 2.6e-84 316.2 254 65.4
VMungo0720G1285 Vigna mungo HOM05D000780 ORTHO05D009033 2.6e-84 316.2 270 62.2
Phvul.L002032 Phaseolus vulgaris HOM05D000780 ORTHO05D009033 3.4e-84 315.8 272 61.0
QL01p042200 Quercus lobata HOM05D000780 ORTHO05D009033 7.5e-84 314.7 318 59.7
CsaV3_1G045040 Cucumis sativus L. HOM05D000780 ORTHO05D009033 9.8e-84 314.3 251 66.5
TWI34G1716 Tripterygium wilfordii HOM05D000780 ORTHO05D009033 2.2e-83 313.2 312 58.3
Lsat_1_v5_gn_9_46781 Lactuca sativa HOM05D000780 ORTHO05D009033 2.9e-83 312.8 270 63.3
Medtr1g079763 Medicago truncatula HOM05D000780 ORTHO05D009033 4.9e-83 312.0 303 56.4
PGR004G1412 Punica granatum HOM05D000780 ORTHO05D009033 6.4e-83 311.6 309 57.6
Aqoxy5G00106 Aquilegia oxysepala HOM05D000780 ORTHO05D009033 1.1e-82 310.8 305 57.7
Psat6g142000 Pisum sativum HOM05D000780 ORTHO05D008187 1.1e-82 310.8 271 59.8
SalBow1G5981 Salvia bowleyana HOM05D000780 ORTHO05D009033 1.4e-82 310.5 312 57.7
TAR633G0111 Trochodendron aralioides HOM05D000780 ORTHO05D009033 1.4e-82 310.5 300 58.3
Ah.06g187930 Amaranthus hybridus HOM05D000780 ORTHO05D009033 1.9e-82 310.1 258 63.6
Sc24g0002520 Simmondsia chinensis HOM05D000780 ORTHO05D009033 2.4e-82 309.7 314 57.3
Hund07171 Selenicereus undatus HOM05D000780 ORTHO05D009033 4.1e-82 308.9 305 57.4
DCAR_030971 Daucus carota HOM05D000780 ORTHO05D009033 1.2e-81 307.4 289 59.5
Potri.019G023700 Populus trichocarpa HOM05D000780 ORTHO05D009033 1.2e-81 307.4 304 57.2
AUR62006989 Chenopodium quinoa HOM05D000780 ORTHO05D009033 2.7e-81 306.2 256 63.7
Carub.0007s3248 Capsella rubella HOM05D000780 ORTHO05D009033 4.6e-81 305.4 308 56.8
THA.LOC104821566 Tarenaya hassleriana HOM05D000780 ORTHO05D009033 4.6e-81 305.4 275 60.4
Lj5g0019051 Lotus japonicus HOM05D000780 ORTHO05D009033 6.0e-81 305.1 256 63.3
EL10Ac4g09771 Beta vulgaris HOM05D000780 ORTHO05D009033 7.8e-81 304.7 311 56.6
FvH4_6g01461 Fragaria vesca HOM05D000780 ORTHO05D009033 7.8e-81 304.7 250 65.6
MD12G1251900 Malus domestica HOM05D000780 ORTHO05D009033 7.8e-81 304.7 312 58.0
Rhsim05G0170400 Rhododendron simsii HOM05D000780 ORTHO05D009033 7.8e-81 304.7 313 59.4
arahy.Tifrunner.gnm1.ann1.ZAXM00 Arachis hypogaea HOM05D000780 ORTHO05D009033 1.3e-80 303.9 272 60.7
Eucgr.H04210 Eucalyptus grandis HOM05D000780 ORTHO05D009033 3.9e-80 302.4 257 63.8
arahy.Tifrunner.gnm1.ann1.09X96J Arachis hypogaea HOM05D000780 ORTHO05D009033 8.6e-80 301.2 272 59.9
AT5G37360 Arabidopsis thaliana HOM05D000780 ORTHO05D009033 1.9e-79 300.1 311 56.3
RcHm_v2.0_Chr3g0449091 Rosa chinensis HOM05D000780 ORTHO05D009033 1.9e-79 300.1 287 60.6
Lalb_Chr21g0311301 Lupinus albus HOM05D000780 ORTHO05D009033 5.6e-79 298.5 274 59.1
ClCG03G011490 Citrullus lanatus HOM05D000780 ORTHO05D009033 7.3e-79 298.1 254 64.2
BcaC02g09559 Brassica carinata HOM05D000780 ORTHO05D009033 1.6e-78 297.0 274 59.9
BolC4t25992H Brassica oleracea HOM05D000780 ORTHO05D009033 1.6e-78 297.0 274 59.9
AL7G45990 Arabidopsis lyrata HOM05D000780 ORTHO05D009033 2.8e-78 296.2 310 56.1
MBI10_g26046_MAGBIO Magnolia biondii HOM05D000780 ORTHO05D009033 2.8e-78 296.2 280 57.9
A04p10530 Brassica napus HOM05D000780 ORTHO05D009033 4.7e-78 295.4 272 59.6
C04p44170 Brassica napus HOM05D000780 ORTHO05D009033 4.7e-78 295.4 276 60.9
Thhalv10027857m.g Eutrema salsugineum HOM05D000780 ORTHO05D009033 6.2e-78 295.0 284 57.4
Sp7g05110 Schrenkiella parvula HOM05D000780 ORTHO05D009033 6.2e-78 295.0 277 58.8
SGA_v2.0_scaffold329G48830 Striga asiatica HOM05D002740 ORTHO05D003126 8.1e-78 294.7 335 53.1
BraA04t16719Z Brassica rapa HOM05D000780 ORTHO05D009033 1.1e-77 294.3 271 59.8
Manes.09G146600 Manihot esculenta HOM05D000780 ORTHO05D009033 1.8e-77 293.5 254 64.2
ECA232G3479 Erigeron canadensis HOM05D000780 ORTHO05D009033 8.9e-77 291.2 250 62.0
vmacro19978 Vaccinium macrocarpon HOM05D000780 ORTHO05D009033 2.0e-76 290.0 340 52.1
unitig_37.g12284 Utricularia gibba HOM05D000780 ORTHO05D009033 9.9e-76 287.7 258 59.7
ATR0088G058 Amborella trichopoda HOM05D000780 ORTHO05D009033 1.7e-75 287.0 252 60.7
Aa31LG9G18020 Aethionema arabicum HOM05D000780 ORTHO05D009033 2.2e-75 286.6 294 55.8
PSO210G3904 Papaver somniferum HOM05D000780 ORTHO05D009033 9.2e-74 281.2 265 58.9
CARHR215730 Cardamine hirsuta HOM05D000780 ORTHO05D009033 2.7e-73 279.6 308 53.9
Dinv01155 Davidia involucrata HOM05D000780 ORTHO05D009033 1.7e-72 276.9 211 69.7
AUR62000636 Chenopodium quinoa HOM05D000780 ORTHO05D008187 3.0e-72 276.2 226 65.0
MELO3C010086.2 Cucumis melo HOM05D000780 ORTHO05D009033 1.5e-71 273.9 223 64.6
COL.COLO4_15539 Corchorus olitorius HOM05D000780 ORTHO05D008187 1.9e-71 273.5 213 66.7
CANSAT54G0520 Cannabis sativa HOM05D000780 ORTHO05D009033 1.2e-70 270.8 256 58.6
Potri.013G050300 Populus trichocarpa HOM05D000780 ORTHO05D009033 4.7e-70 268.9 268 56.0
Glyma.10G167600 Glycine max HOM05D000780 ORTHO05D009033 2.4e-69 266.5 295 52.9
HanXRQChr05g0145151 Helianthus annuus HOM05D000780 ORTHO05D009033 5.2e-69 265.4 256 57.4
FAN02G1432 Fragaria x ananassa HOM05D000780 ORTHO05D009033 1.4e-66 257.3 286 53.1
Prupe.6G353000 Prunus persica HOM05D000780 ORTHO05D009033 1.9e-66 256.9 289 52.6
FAN05G0905 Fragaria x ananassa HOM05D000780 ORTHO05D001132 9.3e-66 254.6 268 54.9
TPR.G10273 Trifolium pratense HOM05D000780 ORTHO05D009033 9.3e-66 254.6 266 54.1
FAN14G3828 Fragaria x ananassa HOM05D000780 ORTHO05D001132 2.1e-65 253.4 268 55.2
FAN14G4937 Fragaria x ananassa HOM05D000780 ORTHO05D001132 2.1e-65 253.4 268 55.2
Haze_04472 Corylus avellana HOM05D000780 ORTHO05D009033 2.7e-65 253.1 288 57.6
Os02g0815400 Oryza sativa ssp. japonica HOM05D000780 ORTHO05D009033 1.7e-64 250.4 275 52.0
Oeu001248.1 Olea europaea HOM05D000780 ORTHO05D008187 3.0e-64 249.6 275 54.2
Sabra19G0033700 Salix brachista HOM05D000780 ORTHO05D009033 1.5e-63 247.3 298 51.3
Sabra13G0046100 Salix brachista HOM05D000780 ORTHO05D008187 4.3e-63 245.7 218 61.0
Zm00001eb258750 Zea mays HOM05D000780 ORTHO05D009033 2.1e-62 243.4 256 52.3
CSS0024577 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D009033 5.3e-61 238.8 243 58.4
Eucgr.H04100 Eucalyptus grandis HOM05D000780 ORTHO05D009033 1.3e-59 234.2 218 59.6
Cpa.g.c33516 Carica papaya HOM05D000780 ORTHO05D009033 7.4e-55 218.4 188 61.2
CiPaw.07G074400 Carya illinoinensis HOM05D000780 ORTHO05D009033 1.1e-53 214.5 229 57.2
Sed0013634 Sechium edule HOM05D000780 ORTHO05D009033 1.8e-48 197.2 265 47.9
Sopen04g021250 Solanum pennellii HOM05D000780 ORTHO05D009033 2.3e-48 196.8 135 79.3
Lj2A46G68 Lonicera japonica HOM05D000780 ORTHO05D009033 3.0e-48 196.4 147 71.4
AagrBONN_evm.TU.Sc2ySwM_228.3981 Anthoceros agrestis HOM05D000780 ORTHO05D009033 5.6e-47 192.2 258 43.8
SMO172G0144 Selaginella moellendorffii HOM05D000780 ORTHO05D009033 1.4e-45 187.6 208 47.6
Pp3c18_1300 Physcomitrium patens HOM05D000780 ORTHO05D009033 1.7e-43 180.6 234 42.7
PGSC0003DMG402028709 Solanum tuberosum HOM05D000780 ORTHO05D009033 2.7e-41 173.3 120 79.2
Cc09_g03040 Coffea canephora HOM05D000780 ORTHO05D009033 6.9e-37 158.7 152 57.9
MD12G1251000 Malus domestica HOM05D000072 ORTHO05D009033 1.5e-36 157.5 195 50.8
PGSC0003DMG401028709 Solanum tuberosum HOM05D000780 ORTHO05D009033 5.9e-36 155.6 118 74.6
CAN.G4.37 Capsicum annuum HOM05D000780 ORTHO05D009033 3.8e-35 152.9 119 70.6
Cc09_g03030 Coffea canephora HOM05D000780 ORTHO05D009033 5.5e-34 149.1 120 67.5
Eucgr.H04102 Eucalyptus grandis HOM05D000780 ORTHO05D009033 2.1e-33 147.1 199 46.7
HPP92_009056 Vanilla planifolia HOM05D001254 ORTHO05D001386 7.9e-33 145.2 166 48.8
CBR_g11120 Chara braunii HOM05D000780 ORTHO05D009033 9.7e-31 138.3 239 36.8
HPP92_009057 Vanilla planifolia HOM05D000780 ORTHO05D009033 1.3e-30 137.9 122 61.5
MD12G1250900 Malus domestica HOM05D000780 ORTHO05D009033 4.8e-30 136.0 151 54.3
SEGI_21696 Sequoiadendron giganteum HOM05D000780 ORTHO05D009033 5.3e-29 132.5 130 51.5
FAN09G0636 Fragaria x ananassa HOM05D000780 ORTHO05D001132 5.9e-28 129.0 114 61.4
SEGI_05244 Sequoiadendron giganteum HOM05D000780 ORTHO05D009033 1.4e-24 117.9 120 56.7
FAN11G0130 Fragaria x ananassa HOM05D000780 ORTHO05D009033 1.7e-22 110.9 225 38.2
FAN05G5022 Fragaria x ananassa HOM05D000780 ORTHO05D009033 1.1e-15 88.2 60 70.0
FvH4_3g18300 Fragaria vesca HOM05D000780 ORTHO05D196851 6.7e-08 62.4 54 59.3
FAN18G1636 Fragaria x ananassa HOM05D000780 ORTHO05D009033 1.3e-06 58.2 60 55.0


User provided reference genes

Program Settings