Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000839g0130 Nicotiana tabacum HOM05D001344 ORTHO05D026328 1.9e-74 282.3 137 100.0
Nitab4.5_0005607g0020 Nicotiana tabacum HOM05D001344 ORTHO05D004319 1.0e-43 180.3 114 80.7
CAN.G394.78 Capsicum annuum HOM05D001344 ORTHO05D004319 2.3e-43 179.1 114 79.8
Sopen06g032820 Solanum pennellii HOM05D001344 ORTHO05D004319 2.5e-42 175.6 114 77.2
PGSC0003DMG400030422 Solanum tuberosum HOM05D001344 ORTHO05D004319 2.5e-42 175.6 114 77.2
MD03G1085200 Malus domestica HOM05D001344 ORTHO05D004319 1.7e-41 172.9 114 76.3
MBI05_g35180_MAGBIO Magnolia biondii HOM05D001344 ORTHO05D004319 1.1e-40 170.2 126 69.8
Prupe.6G068700 Prunus persica HOM05D001344 ORTHO05D004319 1.1e-40 170.2 114 74.6
Peaxi162Scf00481g00049 Petunia axillaris HOM05D001344 ORTHO05D004319 3.1e-40 168.7 114 76.3
Actinidia34430 Actinidia chinensis HOM05D001344 ORTHO05D004319 5.3e-40 167.9 114 73.7
MD11G1093000 Malus domestica HOM05D001344 ORTHO05D004319 5.3e-40 167.9 114 73.7
FvH4_3g37020 Fragaria vesca HOM05D001344 ORTHO05D004319 6.9e-40 167.5 114 73.7
FAN16G2767 Fragaria x ananassa HOM05D001344 ORTHO05D004319 6.9e-40 167.5 114 73.7
FAN21G1343 Fragaria x ananassa HOM05D001344 ORTHO05D004319 6.9e-40 167.5 114 73.7
Lj1A146T70 Lonicera japonica HOM05D001344 ORTHO05D004319 6.9e-40 167.5 114 72.8
CsaV3_1G035670 Cucumis sativus L. HOM05D001344 ORTHO05D004319 9.1e-40 167.2 119 71.4
Dinv17053 Davidia involucrata HOM05D001344 ORTHO05D004319 1.2e-39 166.8 114 72.8
Dinv42997 Davidia involucrata HOM05D001344 ORTHO05D004319 1.2e-39 166.8 114 72.8
Dinv43100 Davidia involucrata HOM05D001344 ORTHO05D004319 1.2e-39 166.8 114 72.8
RcHm_v2.0_Chr5g0066411 Rosa chinensis HOM05D001344 ORTHO05D004319 1.5e-39 166.4 114 73.7
CSS0049702 Camellia sinensis var. sinensis HOM05D001344 ORTHO05D004319 2.0e-39 166.0 114 73.7
FAN25G3201 Fragaria x ananassa HOM05D001344 ORTHO05D004319 2.0e-39 166.0 114 72.8
CANSAT54G0571 Cannabis sativa HOM05D001344 ORTHO05D004319 2.6e-39 165.6 114 75.4
QL01p028015 Quercus lobata HOM05D001344 ORTHO05D004319 2.6e-39 165.6 136 63.2
SalBow2G3551 Salvia bowleyana HOM05D001344 ORTHO05D004319 2.6e-39 165.6 114 73.7
Cc01_g13410 Coffea canephora HOM05D001344 ORTHO05D004319 5.9e-39 164.5 114 72.8
Haze_24186 Corylus avellana HOM05D001344 ORTHO05D004319 5.9e-39 164.5 114 72.8
CsaV3_1G034570 Cucumis sativus L. HOM05D001344 ORTHO05D026328 5.9e-39 164.5 118 70.3
Rhsim01G0232500 Rhododendron simsii HOM05D001344 ORTHO05D004319 5.9e-39 164.5 114 72.8
Atru.chr3.4008 Acer truncatum HOM05D001344 ORTHO05D004319 1.3e-38 163.3 114 72.8
Rhsim13G0076800 Rhododendron simsii HOM05D001344 ORTHO05D004319 1.7e-38 162.9 114 71.1
MSTRG.12655 Avicennia marina HOM05D001344 ORTHO05D004319 2.2e-38 162.5 114 71.9
CiPaw.14G064700 Carya illinoinensis HOM05D001344 ORTHO05D004319 2.2e-38 162.5 114 72.8
Eucgr.J02002 Eucalyptus grandis HOM05D001344 ORTHO05D004319 2.2e-38 162.5 114 71.1
TWI75G0572 Tripterygium wilfordii HOM05D001344 ORTHO05D004319 2.9e-38 162.2 114 72.8
Ciclev10029052m.g Citrus clementina HOM05D001344 ORTHO05D004319 3.8e-38 161.8 114 71.9
Thecc.09G314000 Theobroma cacao HOM05D001344 ORTHO05D004319 6.5e-38 161.0 114 73.7
Manes.01G168500 Manihot esculenta HOM05D001344 ORTHO05D004319 8.5e-38 160.6 114 71.9
Thhalv10008485m.g Eutrema salsugineum HOM05D001344 ORTHO05D004319 1.1e-37 160.2 114 71.1
Sed0004821 Sechium edule HOM05D001344 ORTHO05D004319 1.1e-37 160.2 139 61.9
BraA10t42859Z Brassica rapa HOM05D000064 ORTHO05D004319 1.4e-37 159.8 114 70.2
Hma1.2p1_0615F.1_g189630 Hydrangea macrophylla HOM05D001344 ORTHO05D004319 1.4e-37 159.8 136 62.5
Sp1g06160 Schrenkiella parvula HOM05D001344 ORTHO05D004319 1.4e-37 159.8 114 71.1
A10p05970 Brassica napus HOM05D000064 ORTHO05D004319 1.9e-37 159.5 114 70.2
ClCG03G001240 Citrullus lanatus HOM05D001344 ORTHO05D004319 2.5e-37 159.1 139 60.4
MELO3C020602.2 Cucumis melo HOM05D001344 ORTHO05D004319 2.5e-37 159.1 139 60.4
HanXRQChr08g0237411 Helianthus annuus HOM05D001344 ORTHO05D004319 2.5e-37 159.1 139 61.9
THA.LOC104826306 Tarenaya hassleriana HOM05D001344 ORTHO05D004319 2.5e-37 159.1 139 61.2
Carub.0001s0673 Capsella rubella HOM05D001344 ORTHO05D004319 3.2e-37 158.7 114 70.2
AL1G17570 Arabidopsis lyrata HOM05D001344 ORTHO05D004319 4.2e-37 158.3 114 70.2
BcaB02g06742 Brassica carinata HOM05D001344 ORTHO05D004319 4.2e-37 158.3 114 69.3
Lsat_1_v5_gn_9_24081 Lactuca sativa HOM05D001344 ORTHO05D004319 4.2e-37 158.3 139 61.2
Psat2g110480 Pisum sativum HOM05D001344 ORTHO05D004319 4.2e-37 158.3 114 69.3
TPR.G4420 Trifolium pratense HOM05D001344 ORTHO05D004319 4.2e-37 158.3 114 70.2
BcaC05g24702 Brassica carinata HOM05D000064 ORTHO05D004319 5.5e-37 157.9 114 69.3
C05p05450 Brassica napus HOM05D000064 ORTHO05D004319 5.5e-37 157.9 114 69.3
BolC5t29317H Brassica oleracea HOM05D000064 ORTHO05D004319 5.5e-37 157.9 114 69.3
DCAR_005934 Daucus carota HOM05D001344 ORTHO05D004319 5.5e-37 157.9 114 69.3
Nitab4.5_0000102g0360 Nicotiana tabacum HOM05D001344 ORTHO05D004319 5.5e-37 157.9 114 68.4
Hund18884 Selenicereus undatus HOM05D001344 ORTHO05D004319 5.5e-37 157.9 120 65.8
Aqoxy1G00849 Aquilegia oxysepala HOM05D001344 ORTHO05D004319 7.2e-37 157.5 139 62.6
CiPaw.13G087900 Carya illinoinensis HOM05D001344 ORTHO05D004319 7.2e-37 157.5 114 69.3
AUR62001729 Chenopodium quinoa HOM05D001344 ORTHO05D004319 7.2e-37 157.5 115 67.8
Potri.001G245300 Populus trichocarpa HOM05D001344 ORTHO05D004319 7.2e-37 157.5 114 70.2
SGA_v2.0_scaffold54G19465 Striga asiatica HOM05D001344 ORTHO05D004319 7.2e-37 157.5 114 71.9
Aa31LG1G6700 Aethionema arabicum HOM05D001344 ORTHO05D004319 9.4e-37 157.1 114 69.3
COL.COLO4_18584 Corchorus olitorius HOM05D001344 ORTHO05D004319 9.4e-37 157.1 114 71.9
ECA247G0826 Erigeron canadensis HOM05D001344 ORTHO05D004319 9.4e-37 157.1 139 59.7
Migut.D00873 Erythranthe guttata HOM05D001344 ORTHO05D004319 1.2e-36 156.8 114 69.3
Lj2g0001704 Lotus japonicus HOM05D001344 ORTHO05D004319 1.2e-36 156.8 114 70.2
Sed0016312 Sechium edule HOM05D001344 ORTHO05D004319 1.2e-36 156.8 114 70.2
VMungo1215G0127 Vigna mungo HOM05D001344 ORTHO05D004319 1.2e-36 156.8 114 71.1
MSTRG.17826 Avicennia marina HOM05D001344 ORTHO05D004319 1.6e-36 156.4 139 59.7
BcaC07g42000 Brassica carinata HOM05D001344 ORTHO05D004319 1.6e-36 156.4 114 69.3
C08p50600 Brassica napus HOM05D000064 ORTHO05D004319 1.6e-36 156.4 114 69.3
BolC8t52587H Brassica oleracea HOM05D001344 ORTHO05D004319 1.6e-36 156.4 114 69.3
Nn2g13474 Nelumbo nucifera HOM05D001344 ORTHO05D004319 1.6e-36 156.4 122 68.0
TAR623G0631 Trochodendron aralioides HOM05D001344 ORTHO05D004319 1.6e-36 156.4 122 68.0
TAR633G0925 Trochodendron aralioides HOM05D001344 ORTHO05D004319 1.6e-36 156.4 114 71.9
EL10Ac7g16077 Beta vulgaris HOM05D001344 ORTHO05D004319 2.1e-36 156.0 114 68.4
Glyma.02G030900 Glycine max HOM05D001344 ORTHO05D004319 2.1e-36 156.0 122 64.8
MBI14_g43664_MAGBIO Magnolia biondii HOM05D001344 ORTHO05D004319 2.1e-36 156.0 114 71.9
Medtr5g035190 Medicago truncatula HOM05D001344 ORTHO05D004319 2.1e-36 156.0 114 69.3
TWI31G1357 Tripterygium wilfordii HOM05D001344 ORTHO05D004319 2.1e-36 156.0 114 70.2
vmacro14561 Vaccinium macrocarpon HOM05D001344 ORTHO05D004319 2.1e-36 156.0 139 59.7
GSVIVG01016483001 Vitis vinifera HOM05D001344 ORTHO05D004319 2.1e-36 156.0 114 71.1
Ah.08g220190 Amaranthus hybridus HOM05D001344 ORTHO05D004319 2.7e-36 155.6 114 68.4
Glyma.01G035100 Glycine max HOM05D001344 ORTHO05D004319 2.7e-36 155.6 122 65.6
AT1G07420 Arabidopsis thaliana HOM05D001344 ORTHO05D004319 3.6e-36 155.2 114 69.3
BcaB03g13396 Brassica carinata HOM05D001344 ORTHO05D004319 3.6e-36 155.2 114 68.4
AUR62020046 Chenopodium quinoa HOM05D001344 ORTHO05D004319 3.6e-36 155.2 114 67.5
Lsat_1_v5_gn_5_169701 Lactuca sativa HOM05D001344 ORTHO05D004319 3.6e-36 155.2 139 59.7
A08p35680 Brassica napus HOM05D001344 ORTHO05D004319 4.7e-36 154.8 114 68.4
BraA08t35474Z Brassica rapa HOM05D001344 ORTHO05D004319 4.7e-36 154.8 114 68.4
Potri.009G037400 Populus trichocarpa HOM05D001344 ORTHO05D004319 4.7e-36 154.8 114 67.5
THA.LOC104815774 Tarenaya hassleriana HOM05D001344 ORTHO05D004319 4.7e-36 154.8 139 60.4
Duzib170G0656 Durio zibethinus HOM05D001344 ORTHO05D004319 7.9e-36 154.1 114 71.1
Gohir.A13G225900 Gossypium hirsutum HOM05D001344 ORTHO05D004319 7.9e-36 154.1 114 71.1
Gohir.D13G231300 Gossypium hirsutum HOM05D001344 ORTHO05D004319 7.9e-36 154.1 114 71.1
Gorai.013G261900 Gossypium raimondii HOM05D001344 ORTHO05D004319 7.9e-36 154.1 114 71.1
HanXRQChr01g0010671 Helianthus annuus HOM05D001344 ORTHO05D004319 7.9e-36 154.1 139 57.6
C08p03010 Brassica napus HOM05D001344 ORTHO05D004319 1.0e-35 153.7 114 67.5
BolC8t47102H Brassica oleracea HOM05D001344 ORTHO05D004319 1.0e-35 153.7 114 67.5
Sabra16G0148700 Salix brachista HOM05D001344 ORTHO05D004319 1.0e-35 153.7 114 69.3
Lalb_Chr09g0326471 Lupinus albus HOM05D001344 ORTHO05D004319 2.3e-35 152.5 114 67.5
arahy.Tifrunner.gnm1.ann1.4UPT2U Arachis hypogaea HOM05D001344 ORTHO05D004319 3.0e-35 152.1 114 67.5
Cpa.g.sc81.89 Carica papaya HOM05D001344 ORTHO05D004319 3.0e-35 152.1 111 72.1
Duzib150G0391 Durio zibethinus HOM05D001344 ORTHO05D004319 5.1e-35 151.4 114 69.3
Nitab4.5_0002582g0040 Nicotiana tabacum HOM05D001344 ORTHO05D004319 5.1e-35 151.4 114 64.9
Hund04915 Selenicereus undatus HOM05D001344 ORTHO05D004319 5.1e-35 151.4 114 65.8
PSO063G7680 Papaver somniferum HOM05D001344 ORTHO05D004319 6.7e-35 151.0 122 63.9
PGR119G2106 Punica granatum HOM05D001344 ORTHO05D004319 6.7e-35 151.0 114 68.4
BcaC07g42466 Brassica carinata HOM05D001344 ORTHO05D004319 8.8e-35 150.6 114 66.7
arahy.Tifrunner.gnm1.ann1.IBW8RK Arachis hypogaea HOM05D001344 ORTHO05D004319 1.1e-34 150.2 114 66.7
CDE02G0769 Ceratophyllum demersum HOM05D001344 ORTHO05D004319 1.1e-34 150.2 114 67.5
Gohir.A03G045300 Gossypium hirsutum HOM05D001344 ORTHO05D004319 1.1e-34 150.2 114 71.1
Gohir.D03G121700 Gossypium hirsutum HOM05D001344 ORTHO05D004319 1.1e-34 150.2 114 71.1
Gorai.003G128800 Gossypium raimondii HOM05D001344 ORTHO05D004319 1.1e-34 150.2 114 71.1
Peaxi162Scf00265g00412 Petunia axillaris HOM05D001344 ORTHO05D004319 1.1e-34 150.2 114 65.8
AL4G23950 Arabidopsis lyrata HOM05D001344 ORTHO05D004319 1.5e-34 149.8 139 56.8
ECA248G1979 Erigeron canadensis HOM05D001344 ORTHO05D004319 1.5e-34 149.8 139 56.8
arahy.Tifrunner.gnm1.ann1.1RGA44 Arachis hypogaea HOM05D001344 ORTHO05D004319 2.0e-34 149.4 114 68.4
arahy.Tifrunner.gnm1.ann1.8F47NR Arachis hypogaea HOM05D001344 ORTHO05D004319 2.0e-34 149.4 114 68.4
Nn2g11230 Nelumbo nucifera HOM05D001344 ORTHO05D004319 2.6e-34 149.1 122 65.6
Manes.02G127900 Manihot esculenta HOM05D001344 ORTHO05D004319 4.4e-34 148.3 113 67.3
Medtr8g063210 Medicago truncatula HOM05D001344 ORTHO05D004319 4.4e-34 148.3 114 66.7
Aa31LG5G7040 Aethionema arabicum HOM05D001344 ORTHO05D004319 5.7e-34 147.9 139 56.8
Carub.0004s1045 Capsella rubella HOM05D001344 ORTHO05D004319 7.4e-34 147.5 139 56.1
CAN.G141.16 Capsicum annuum HOM05D001344 ORTHO05D004319 1.3e-33 146.7 139 54.0
Lalb_Chr16g0382441 Lupinus albus HOM05D001344 ORTHO05D004319 1.7e-33 146.4 114 65.8
CDE04G1412 Ceratophyllum demersum HOM05D001344 ORTHO05D004319 2.8e-33 145.6 111 67.6
Lalb_Chr09g0335131 Lupinus albus HOM05D001344 ORTHO05D004319 2.8e-33 145.6 113 66.4
DCAR_007426 Daucus carota HOM05D001344 ORTHO05D004319 4.8e-33 144.8 114 63.2
Phvul.002G074300 Phaseolus vulgaris HOM05D001344 ORTHO05D004319 4.8e-33 144.8 136 53.7
AT2G29390 Arabidopsis thaliana HOM05D001344 ORTHO05D004319 6.3e-33 144.4 139 55.4
GSVIVG01024874001 Vitis vinifera HOM05D001344 ORTHO05D004319 6.3e-33 144.4 114 64.9
VMungo1215G2937 Vigna mungo HOM05D001344 ORTHO05D004319 2.4e-32 142.5 114 61.4
Lalb_Chr16g0392481 Lupinus albus HOM05D001344 ORTHO05D004319 4.1e-32 141.7 122 60.7
PGSC0003DMG400002156 Solanum tuberosum HOM05D001344 ORTHO05D004319 4.1e-32 141.7 114 58.8
Solyc06g005750.3 Solanum lycopersicum HOM05D001344 ORTHO05D004319 9.1e-32 140.6 114 57.9
Sopen06g001740 Solanum pennellii HOM05D001344 ORTHO05D004319 9.1e-32 140.6 114 57.9
Medtr6g039970 Medicago truncatula HOM05D001344 ORTHO05D004319 3.5e-31 138.7 114 63.2
BcaB06g28302 Brassica carinata HOM05D001344 ORTHO05D004319 7.7e-31 137.5 114 60.5
Thhalv10017113m.g Eutrema salsugineum HOM05D001344 ORTHO05D004319 8.5e-30 134.0 139 52.5
Pp3c11_23950 Physcomitrium patens HOM05D001344 ORTHO05D004319 2.5e-29 132.5 136 52.2
Sp4g12120 Schrenkiella parvula HOM05D001344 ORTHO05D004319 3.2e-29 132.1 139 51.8
SMO115G0130 Selaginella moellendorffii HOM05D001344 ORTHO05D004319 3.2e-29 132.1 136 51.5
AagrBONN_evm.TU.Sc2ySwM_117.1624 Anthoceros agrestis HOM05D001344 ORTHO05D004319 4.2e-29 131.7 114 61.4
BraA04t17789Z Brassica rapa HOM05D001344 ORTHO05D004319 5.5e-29 131.3 139 51.1
Pp3c7_1450 Physcomitrium patens HOM05D001344 ORTHO05D004319 5.5e-29 131.3 136 51.5
BcaC02g08089 Brassica carinata HOM05D001344 ORTHO05D004319 1.2e-28 130.2 139 50.4
C04p58560 Brassica napus HOM05D001344 ORTHO05D004319 1.2e-28 130.2 139 50.4
A04p22410 Brassica napus HOM05D001344 ORTHO05D004319 1.6e-28 129.8 139 50.4
BolC4t27374H Brassica oleracea HOM05D001344 ORTHO05D004319 2.7e-28 129.0 139 50.4
HPP92_027962 Vanilla planifolia HOM05D001344 ORTHO05D004319 2.7e-28 129.0 139 49.6
Mapoly0066s0107 Marchantia polymorpha HOM05D001344 ORTHO05D004319 6.1e-28 127.9 136 51.5
Os07g0101500 Oryza sativa ssp. japonica HOM05D001344 ORTHO05D004319 3.3e-26 122.1 122 53.3
A09p66450 Brassica napus HOM05D000064 ORTHO05D004319 5.7e-26 121.3 116 54.3
ATR0559G009 Amborella trichopoda HOM05D001344 ORTHO05D004319 9.1e-24 114.0 90 64.4
Os11g0707600 Oryza sativa ssp. japonica HOM05D001344 ORTHO05D004319 1.2e-23 113.6 119 48.7
Zm00001eb362010 Zea mays HOM05D001344 ORTHO05D004319 5.9e-23 111.3 122 48.4
SMO146G0363 Selaginella moellendorffii HOM05D001344 ORTHO05D004319 1.7e-22 109.8 136 47.1
Nn8g39602 Nelumbo nucifera HOM05D001344 ORTHO05D004319 1.9e-21 106.3 96 59.4
Lj2A1070T72 Lonicera japonica HOM05D001344 ORTHO05D004319 1.2e-18 97.1 76 63.2
Actinidia23915 Actinidia chinensis HOM05D001344 ORTHO05D026328 4.4e-18 95.1 76 65.8
vmacro03024 Vaccinium macrocarpon HOM05D001344 ORTHO05D004319 2.2e-17 92.8 137 45.3
Phvul.002G074200 Phaseolus vulgaris HOM05D001344 ORTHO05D004319 4.8e-17 91.7 55 80.0
HPP92_026786 Vanilla planifolia HOM05D005320 ORTHO05D007922 5.3e-16 88.2 85 56.5
SEGI_30970 Sequoiadendron giganteum HOM05D001344 ORTHO05D004319 9.1e-16 87.4 46 82.6
Ca_26002_v3 Cicer arietinum L. HOM05D000323 ORTHO05D000201 2.0e-15 86.3 54 74.1
Medtr2g060330 Medicago truncatula HOM05D001344 ORTHO05D026328 6.5e-14 81.3 45 86.7
Sabra09G0026400 Salix brachista HOM05D001344 ORTHO05D004319 6.5e-14 81.3 51 70.6
Ca_22771_v3 Cicer arietinum L. HOM05D000323 ORTHO05D000201 2.5e-13 79.3 48 75.0
Zm00001eb164330 Zea mays HOM05D001344 ORTHO05D004319 3.6e-12 75.5 58 58.6
CSS0034009 Camellia sinensis var. sinensis HOM05D001344 ORTHO05D004319 5.7e-10 68.2 34 88.2
Sc21g0006060 Simmondsia chinensis HOM05D001344 ORTHO05D004319 1.7e-09 66.6 35 80.0
MCO04G133 Micromonas commoda HOM05D001344 ORTHO05D004319 3.8e-06 55.5 128 28.1


User provided reference genes

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