Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000832g0170 Nicotiana tabacum HOM05D007174 ORTHO05D009061 1.7e-134 482.6 244 100.0
Nitab4.5_0008764g0010 Nicotiana tabacum HOM05D007174 ORTHO05D009061 1.6e-127 459.5 244 94.7
CAN.G548.22 Capsicum annuum HOM05D007174 ORTHO05D009061 4.6e-119 431.4 244 87.7
Sopen03g005220 Solanum pennellii HOM05D007174 ORTHO05D009061 3.3e-117 425.2 244 86.1
PGSC0003DMG400014262 Solanum tuberosum HOM05D007174 ORTHO05D009061 5.2e-115 417.9 244 85.7
Peaxi162Scf00648g00220 Petunia axillaris HOM05D007174 ORTHO05D009061 1.5e-114 416.4 244 85.7
CSS0029278 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 5.0e-81 305.1 247 64.0
CSS0008795 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 2.3e-78 296.2 247 62.8
Manes.14G029900 Manihot esculenta HOM05D007174 ORTHO05D009061 8.8e-78 294.3 233 61.8
Rhsim09G0195900 Rhododendron simsii HOM05D007174 ORTHO05D009061 1.9e-77 293.1 247 59.5
vmacro09863 Vaccinium macrocarpon HOM05D007174 ORTHO05D009061 4.3e-77 292.0 248 58.9
CSS0030546 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 2.8e-76 289.3 250 60.0
Dinv35170 Davidia involucrata HOM05D007174 ORTHO05D009061 4.8e-76 288.5 254 59.4
MSTRG.27141 Avicennia marina HOM05D007174 ORTHO05D009061 1.8e-75 286.6 257 58.4
Nn1g01328 Nelumbo nucifera HOM05D007174 ORTHO05D009061 4.1e-75 285.4 229 62.4
Thecc.03G169500 Theobroma cacao HOM05D007174 ORTHO05D009061 4.1e-75 285.4 246 58.1
Ciclev10005753m.g Citrus clementina HOM05D007174 ORTHO05D009061 9.1e-75 284.3 244 60.7
Dinv28496 Davidia involucrata HOM05D000059 ORTHO05D005093 3.4e-74 282.3 266 57.5
Potri.012G134500 Populus trichocarpa HOM05D007174 ORTHO05D009061 3.4e-74 282.3 234 59.8
Cpa.g.sc3.335 Carica papaya HOM05D007174 ORTHO05D009061 2.2e-73 279.6 228 62.7
Gohir.A12G261100 Gossypium hirsutum HOM05D007174 ORTHO05D009061 1.1e-72 277.3 212 63.7
HanXRQChr15g0473391 Helianthus annuus HOM05D000003 ORTHO05D000004 1.1e-72 277.3 199 67.3
FAN06G1461 Fragaria x ananassa HOM05D000059 ORTHO05D005093 2.5e-72 276.2 216 63.9
Aqoxy7G00468 Aquilegia oxysepala HOM05D007174 ORTHO05D009061 3.2e-72 275.8 249 55.8
Eucgr.K00215 Eucalyptus grandis HOM05D007174 ORTHO05D009061 4.2e-72 275.4 246 56.9
Duzib205G1938 Durio zibethinus HOM05D007174 ORTHO05D009061 7.2e-72 274.6 249 57.0
Gorai.008G280800 Gossypium raimondii HOM05D007174 ORTHO05D009061 9.4e-72 274.2 212 62.7
Sabra12G0101100 Salix brachista HOM05D007174 ORTHO05D009061 1.2e-71 273.9 237 58.2
FvH4_7g28911 Fragaria vesca HOM05D007174 ORTHO05D009061 1.6e-71 273.5 216 63.4
GSVIVG01010637001 Vitis vinifera HOM05D007174 ORTHO05D009061 3.6e-71 272.3 256 56.2
QL09p015458 Quercus lobata HOM05D007174 ORTHO05D009061 6.1e-71 271.6 222 61.7
Lsat_1_v5_gn_9_53840 Lactuca sativa HOM05D007174 ORTHO05D009061 7.9e-71 271.2 244 56.6
FAN01G2691 Fragaria x ananassa HOM05D000059 ORTHO05D005093 1.0e-70 270.8 216 62.5
COL.COLO4_14250 Corchorus olitorius HOM05D000059 ORTHO05D005093 1.4e-70 270.4 197 66.5
AUR62016040 Chenopodium quinoa HOM05D007174 ORTHO05D009061 1.8e-70 270.0 233 57.1
Migut.F00385 Erythranthe guttata HOM05D007174 ORTHO05D009061 1.8e-70 270.0 210 63.8
DCAR_018153 Daucus carota HOM05D007174 ORTHO05D009061 3.0e-70 269.2 253 55.3
Prupe.2G289100 Prunus persica HOM05D007174 ORTHO05D009061 3.0e-70 269.2 230 59.1
CiPaw.04G068400 Carya illinoinensis HOM05D007174 ORTHO05D009061 3.9e-70 268.9 232 59.1
FAN03G3394 Fragaria x ananassa HOM05D000059 ORTHO05D005093 6.7e-70 268.1 216 62.0
PGR142G4376 Punica granatum HOM05D007174 ORTHO05D009061 6.7e-70 268.1 205 64.9
Lj2g0011010 Lotus japonicus HOM05D007174 ORTHO05D009061 1.1e-69 267.3 212 60.4
TAR374G0585 Trochodendron aralioides HOM05D007174 ORTHO05D009061 1.5e-69 266.9 205 64.4
Lj1A990G55 Lonicera japonica HOM05D007174 ORTHO05D009061 2.0e-69 266.5 186 68.3
Phvul.004G122400 Phaseolus vulgaris HOM05D007174 ORTHO05D009061 2.6e-69 266.2 251 55.4
Glyma.16G199500 Glycine max HOM05D007174 ORTHO05D009061 3.3e-69 265.8 209 61.2
Lj6g0017578 Lotus japonicus HOM05D007174 ORTHO05D009061 5.7e-69 265.0 212 60.4
SalBow4G1508 Salvia bowleyana HOM05D007174 ORTHO05D009061 7.4e-69 264.6 235 58.3
Sed0014335 Sechium edule HOM05D002642 ORTHO05D002834 7.4e-69 264.6 239 56.5
FAN03G1635 Fragaria x ananassa HOM05D000059 ORTHO05D005093 9.7e-69 264.2 216 61.6
MD01G1195800 Malus domestica HOM05D007174 ORTHO05D009061 9.7e-69 264.2 221 58.8
Cc02_g03460 Coffea canephora HOM05D007174 ORTHO05D009061 2.2e-68 263.1 255 54.9
Solyc03g026330.4 Solanum lycopersicum HOM05D007174 ORTHO05D009061 3.7e-68 262.3 151 84.8
Glyma.09G147500 Glycine max HOM05D007174 ORTHO05D009061 1.8e-67 260.0 247 55.5
VMungo0464G0116 Vigna mungo HOM05D007174 ORTHO05D009061 2.4e-67 259.6 252 54.4
RcHm_v2.0_Chr1g0376581 Rosa chinensis HOM05D007174 ORTHO05D009061 3.1e-67 259.2 233 57.5
EL10Ac3g05680 Beta vulgaris HOM05D007174 ORTHO05D009061 7.0e-67 258.1 211 60.2
FAN10G2932 Fragaria x ananassa HOM05D000059 ORTHO05D005093 7.0e-67 258.1 247 55.5
Lalb_Chr19g0131081 Lupinus albus HOM05D007174 ORTHO05D009061 1.5e-66 256.9 186 64.5
CsaV3_3G016740 Cucumis sativus L. HOM05D007174 ORTHO05D009061 2.0e-66 256.5 244 54.1
CSS0030220 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 2.6e-66 256.1 250 56.4
MBI04_g40843_MAGBIO Magnolia biondii HOM05D007174 ORTHO05D009061 2.6e-66 256.1 229 57.6
Actinidia03101 Actinidia chinensis HOM05D007174 ORTHO05D009061 3.4e-66 255.8 172 72.1
Psat1g105240 Pisum sativum HOM05D007174 ORTHO05D009061 3.4e-66 255.8 232 56.0
TPR.G9185 Trifolium pratense HOM05D007174 ORTHO05D009061 4.5e-66 255.4 253 54.5
arahy.Tifrunner.gnm1.ann1.CGP099 Arachis hypogaea HOM05D007174 ORTHO05D009061 5.9e-66 255.0 199 61.3
Medtr6g465290 Medicago truncatula HOM05D007174 ORTHO05D009061 1.0e-65 254.2 207 60.9
MELO3C006867.2 Cucumis melo HOM05D007174 ORTHO05D009061 1.7e-65 253.4 244 52.9
ClCG05G007760 Citrullus lanatus HOM05D002642 ORTHO05D002834 2.2e-65 253.1 243 53.1
SGA_v2.0_scaffold2G01087 Striga asiatica HOM05D007174 ORTHO05D009061 2.9e-65 252.7 234 57.3
Zm00001eb187200 Zea mays HOM05D007174 ORTHO05D009061 5.0e-65 251.9 207 58.0
arahy.Tifrunner.gnm1.ann1.AW02WS Arachis hypogaea HOM05D007174 ORTHO05D009061 1.9e-64 250.0 185 63.8
CANSAT21G1580 Cannabis sativa HOM05D007174 ORTHO05D009061 1.6e-63 246.9 197 59.4
Sc25g0000350 Simmondsia chinensis HOM05D007174 ORTHO05D009061 1.6e-63 246.9 181 65.7
Atru.chr1.537 Acer truncatum HOM05D007174 ORTHO05D009061 2.7e-63 246.1 181 65.7
TWI23G0481 Tripterygium wilfordii HOM05D007174 ORTHO05D009061 2.7e-63 246.1 246 54.9
Os02g0677600 Oryza sativa ssp. japonica HOM05D007174 ORTHO05D009061 3.6e-63 245.7 203 57.6
ATR0757G135 Amborella trichopoda HOM05D007174 ORTHO05D009061 6.3e-60 235.0 203 55.2
Haze_13772 Corylus avellana HOM05D007174 ORTHO05D009061 4.1e-59 232.3 207 55.1
AT5G62140 Arabidopsis thaliana HOM05D007174 ORTHO05D009061 7.7e-58 228.0 230 54.8
BcaB07g29797 Brassica carinata HOM05D007174 ORTHO05D009061 5.0e-57 225.3 235 51.5
AL8G38920 Arabidopsis lyrata HOM05D007174 ORTHO05D009061 8.5e-57 224.6 230 53.0
Thhalv10004841m.g Eutrema salsugineum HOM05D007174 ORTHO05D009061 1.1e-56 224.2 235 50.6
A02p42000 Brassica napus HOM05D007174 ORTHO05D009061 1.9e-56 223.4 241 49.8
BraA02t09135Z Brassica rapa HOM05D007174 ORTHO05D009061 1.9e-56 223.4 241 49.8
CARHR275910 Cardamine hirsuta HOM05D007174 ORTHO05D009061 4.2e-56 222.2 213 55.4
BcaC03g18123 Brassica carinata HOM05D007174 ORTHO05D009061 5.5e-56 221.9 241 49.8
BolC2t12246H Brassica oleracea HOM05D007174 ORTHO05D009061 5.5e-56 221.9 241 49.4
Sp2g25310 Schrenkiella parvula HOM05D007174 ORTHO05D009061 5.5e-56 221.9 221 53.4
Carub.0008s2281 Capsella rubella HOM05D007174 ORTHO05D009061 9.4e-56 221.1 230 50.9
Mapoly0145s0018 Marchantia polymorpha HOM05D007174 ORTHO05D009061 6.1e-55 218.4 177 57.1
THA.LOC104826810 Tarenaya hassleriana HOM05D007174 ORTHO05D009061 1.4e-54 217.2 197 55.3
Oeu030133.1 Olea europaea HOM05D007174 ORTHO05D009061 1.8e-54 216.9 142 68.3
arahy.Tifrunner.gnm1.ann1.09T8EW Arachis hypogaea HOM05D007174 ORTHO05D009061 5.2e-54 215.3 181 58.0
ECA232G4749 Erigeron canadensis HOM05D007174 ORTHO05D009061 6.3e-52 208.4 144 67.4
SEGI_06842 Sequoiadendron giganteum HOM05D007174 ORTHO05D009061 1.8e-51 206.8 175 54.9
AagrBONN_evm.TU.Sc2ySwM_228.5753 Anthoceros agrestis HOM05D007174 ORTHO05D009061 2.7e-50 203.0 177 50.8
Pp3c13_6960 Physcomitrium patens HOM05D007174 ORTHO05D009061 1.1e-48 197.6 180 52.8
unitig_747.g21761 Utricularia gibba HOM05D007174 ORTHO05D009061 7.2e-48 194.9 202 52.0
arahy.Tifrunner.gnm1.ann1.JY00AE Arachis hypogaea HOM05D007174 ORTHO05D009061 6.1e-47 191.8 163 60.1
CBR_g53539 Chara braunii HOM05D007174 ORTHO05D009061 1.5e-45 187.2 188 51.1
Sc13g0008390 Simmondsia chinensis HOM05D007174 ORTHO05D009061 5.7e-45 185.3 246 42.7
Gohir.D12G262000 Gossypium hirsutum HOM05D007174 ORTHO05D009061 1.3e-44 184.1 212 48.1
Pp3c4_22170 Physcomitrium patens HOM05D007174 ORTHO05D009061 1.6e-42 177.2 178 48.9
SMO137G0111 Selaginella moellendorffii HOM05D007174 ORTHO05D009061 2.3e-41 173.3 219 40.6
EL10Ac3g05682 Beta vulgaris HOM05D007174 ORTHO05D009061 7.2e-40 168.3 217 43.3
AUR62021246 Chenopodium quinoa HOM05D007174 ORTHO05D009061 3.3e-32 142.9 87 75.9
arahy.Tifrunner.gnm1.ann1.U0QS20 Arachis hypogaea HOM05D007174 ORTHO05D009061 4.0e-30 136.0 170 45.9
HanXRQChr15g0482681 Helianthus annuus HOM05D007174 ORTHO05D009061 4.0e-30 136.0 145 51.7
Sc13g0008380 Simmondsia chinensis HOM05D007174 ORTHO05D009061 4.9e-28 129.0 244 33.6
Cre01.g019600 Chlamydomonas reinhardtii HOM05D007174 ORTHO05D009061 1.9e-27 127.1 221 37.1
arahy.Tifrunner.gnm1.ann1.BIF85U Arachis hypogaea HOM05D007174 ORTHO05D009061 7.5e-21 105.1 83 59.0
CDE01G0613 Ceratophyllum demersum HOM05D007174 ORTHO05D009061 1.1e-16 91.3 159 35.8
Aa31LG11G1430 Aethionema arabicum HOM05D007174 ORTHO05D009061 4.3e-16 89.4 67 61.2
Pp3c26_1960 Physcomitrium patens HOM05D007174 ORTHO05D009061 1.2e-15 87.8 94 42.6
MCO06G097 Micromonas commoda HOM05D007174 ORTHO05D009061 2.8e-15 86.7 128 39.1
SEGI_30770 Sequoiadendron giganteum HOM05D000501 ORTHO05D009061 9.2e-11 71.6 73 47.9
Cre10.g463800 Chlamydomonas reinhardtii HOM05D007174 ORTHO05D009061 2.3e-09 67.0 184 29.9
HPP92_026872 Vanilla planifolia HOM05D007174 ORTHO05D009061 3.3e-08 63.2 73 39.7
Oeu004139.1 Olea europaea HOM05D007174 ORTHO05D009061 5.2e-06 55.8 87 37.9


User provided reference genes

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