Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000832g0070 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.4e-90 336.3 174 100.0
Nitab4.5_0027852g0010 Nicotiana tabacum HOM05D008401 ORTHO05D002765 5.5e-74 281.2 173 84.4
Nitab4.5_0002534g0090 Nicotiana tabacum HOM05D008401 ORTHO05D002765 9.3e-74 280.4 172 84.9
Nitab4.5_0003966g0040 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.9e-71 272.7 173 82.1
Nitab4.5_0012915g0010 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.9e-71 272.7 173 83.2
Nitab4.5_0011275g0040 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.8e-69 266.2 170 82.9
Nitab4.5_0001614g0160 Nicotiana tabacum HOM05D008401 ORTHO05D002765 2.5e-66 255.8 173 79.2
Nitab4.5_0002430g0060 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.1e-63 246.9 173 76.9
Nitab4.5_0000403g0060 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.9e-63 246.1 173 78.0
Nitab4.5_0007069g0020 Nicotiana tabacum HOM05D008401 ORTHO05D002765 4.3e-63 245.0 173 76.9
Nitab4.5_0004770g0070 Nicotiana tabacum HOM05D008401 ORTHO05D002765 2.8e-62 242.3 165 77.6
Nitab4.5_0001591g0060 Nicotiana tabacum HOM05D008401 ORTHO05D002765 3.1e-61 238.8 149 83.9
Nitab4.5_0001439g0140 Nicotiana tabacum HOM05D008401 ORTHO05D002765 3.4e-60 235.3 173 74.6
Nitab4.5_0000034g0050 Nicotiana tabacum HOM05D008401 ORTHO05D002765 5.9e-60 234.6 173 73.4
Nitab4.5_0003288g0080 Nicotiana tabacum HOM05D008401 ORTHO05D002765 5.5e-58 228.0 174 73.6
Nitab4.5_0000662g0100 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.5e-55 219.9 158 75.9
Nitab4.5_0001259g0140 Nicotiana tabacum HOM05D008401 ORTHO05D002765 3.9e-48 195.3 174 64.4
Nitab4.5_0006446g0050 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.7e-46 189.9 127 80.3
Nitab4.5_0017747g0040 Nicotiana tabacum HOM05D008401 ORTHO05D002765 7.7e-44 181.0 150 68.0
Nitab4.5_0000074g0150 Nicotiana tabacum HOM05D008401 ORTHO05D002765 4.2e-34 148.7 173 53.8
Nitab4.5_0000026g0270 Nicotiana tabacum HOM05D008401 ORTHO05D002765 2.1e-33 146.4 95 83.2
Nitab4.5_0002642g0110 Nicotiana tabacum HOM05D008401 ORTHO05D002765 7.0e-29 131.3 91 81.3
Nitab4.5_0003994g0010 Nicotiana tabacum HOM05D008401 ORTHO05D002765 7.0e-29 131.3 86 83.7
Nitab4.5_0001177g0100 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.6e-28 130.2 86 83.7
Nitab4.5_0003934g0100 Nicotiana tabacum HOM05D008401 ORTHO05D002765 4.5e-28 128.6 86 83.7
Nitab4.5_0001425g0080 Nicotiana tabacum HOM05D008401 ORTHO05D002765 2.3e-27 126.3 86 81.4
Nitab4.5_0001889g0040 Nicotiana tabacum HOM05D008401 ORTHO05D002765 2.8e-25 119.4 86 80.2
Solyc10g052716.1 Solanum lycopersicum HOM05D000017 ORTHO05D002765 9.8e-23 110.9 136 42.6
Nitab4.5_0012044g0020 Nicotiana tabacum HOM05D008401 ORTHO05D002765 3.7e-22 109.0 81 76.5
Nitab4.5_0009921g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.4e-21 107.1 139 42.4
Sopen10g023510 Solanum pennellii HOM05D000017 ORTHO05D000013 1.8e-21 106.7 160 38.8
Nitab4.5_0002951g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.1e-17 93.2 175 36.6
Nitab4.5_0006009g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.7e-17 92.0 185 32.4
Nitab4.5_0008359g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.7e-17 92.0 179 31.3
Nitab4.5_0001299g0150 Nicotiana tabacum HOM05D008401 ORTHO05D002765 8.0e-17 91.3 79 69.6
Nitab4.5_0002279g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.0e-16 90.9 193 32.6
CANSAT78G0529 Cannabis sativa HOM05D010396 ORTHO05D002765 1.2e-15 87.4 223 27.4
Nitab4.5_0004728g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.2e-15 87.4 180 30.0
Nitab4.5_0003887g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.0e-15 86.7 194 32.0
CANSAT21G0992 Cannabis sativa HOM05D010396 ORTHO05D002765 4.4e-15 85.5 225 27.1
Nitab4.5_0001212g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.4e-15 85.5 184 32.1
Nitab4.5_0013596g0040 Nicotiana tabacum HOM05D006864 ORTHO05D002765 7.5e-15 84.7 95 45.3
Nitab4.5_0007303g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.2e-14 83.2 176 32.4
CANSAT78G0321 Cannabis sativa HOM05D010396 ORTHO05D002765 2.9e-14 82.8 225 27.6
Nitab4.5_0000036g0400 Nicotiana tabacum HOM05D006864 ORTHO05D002765 6.4e-14 81.6 187 32.6
Nitab4.5_0001173g0060 Nicotiana tabacum HOM05D006864 ORTHO05D002765 6.4e-14 81.6 95 44.2
Nitab4.5_0001947g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 8.3e-14 81.3 184 31.0
CANSAT01G2679 Cannabis sativa HOM05D010396 ORTHO05D002765 1.1e-13 80.9 105 36.2
CANSAT25G3317 Cannabis sativa HOM05D010396 ORTHO05D002765 1.1e-13 80.9 105 36.2
CANSAT64G2574 Cannabis sativa HOM05D010396 ORTHO05D002765 1.1e-13 80.9 105 36.2
Nitab4.5_0000890g0220 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.4e-13 80.5 177 33.9
Nitab4.5_0000584g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.4e-13 79.7 168 33.9
Nitab4.5_0000829g0130 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.4e-13 79.7 161 34.2
Nitab4.5_0001863g0150 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.1e-13 79.0 106 41.5
Nitab4.5_0000098g0190 Nicotiana tabacum HOM05D008401 ORTHO05D002765 7.0e-13 78.2 51 84.3
Nitab4.5_0007005g0050 Nicotiana tabacum HOM05D007248 ORTHO05D002765 7.0e-13 78.2 180 30.6
Nitab4.5_0001062g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 9.2e-13 77.8 118 35.6
Nitab4.5_0005249g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.6e-12 77.0 176 32.4
Nitab4.5_0000374g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.7e-12 76.3 158 28.5
Nitab4.5_0003586g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.7e-12 76.3 188 29.3
Nitab4.5_0003674g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.5e-12 75.9 171 27.5
Nitab4.5_0000377g0030 Nicotiana tabacum HOM05D008401 ORTHO05D002765 4.6e-12 75.5 48 83.3
Nitab4.5_0001707g0030 Nicotiana tabacum HOM05D008401 ORTHO05D002765 4.6e-12 75.5 49 83.7
Nitab4.5_0003911g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 6.0e-12 75.1 181 29.3
Nitab4.5_0000814g0120 Nicotiana tabacum HOM05D007248 ORTHO05D002765 7.8e-12 74.7 180 28.9
Nitab4.5_0005199g0100 Nicotiana tabacum HOM05D006864 ORTHO05D000013 7.8e-12 74.7 152 36.2
Nitab4.5_0004038g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.3e-11 73.9 111 36.9
Nitab4.5_0004295g0040 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.0e-11 72.8 176 30.7
Nitab4.5_0006628g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.0e-11 72.8 180 31.7
Nitab4.5_0004917g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.9e-11 72.4 180 31.1
Nitab4.5_0002052g0070 Nicotiana tabacum HOM05D008401 ORTHO05D002765 5.0e-11 72.0 48 77.1
Nitab4.5_0000721g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 8.6e-11 71.2 187 26.7
Nitab4.5_0001816g0240 Nicotiana tabacum HOM05D007248 ORTHO05D002765 8.6e-11 71.2 175 27.4
Nitab4.5_0000697g0250 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.5e-10 70.5 93 43.0
Nitab4.5_0002944g0070 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.5e-10 70.5 95 43.2
Nitab4.5_0006248g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.5e-10 70.5 113 31.9
Nitab4.5_0006936g0070 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.5e-10 70.5 182 31.9
Nitab4.5_0003767g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.9e-10 70.1 180 30.0
Nitab4.5_0006698g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.3e-10 69.3 92 43.5
Solyc09g150133.1 Solanum lycopersicum HOM05D007248 ORTHO05D002765 3.3e-10 69.3 179 29.1
Sopen03g030620 Solanum pennellii HOM05D000017 ORTHO05D000013 3.3e-10 69.3 177 31.6
DCAR_015925 Daucus carota HOM05D006864 ORTHO05D002765 4.3e-10 68.9 152 30.3
Nitab4.5_0000423g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 4.3e-10 68.9 180 30.0
Nitab4.5_0001968g0150 Nicotiana tabacum HOM05D007248 ORTHO05D002765 4.3e-10 68.9 180 27.8
Nitab4.5_0005474g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.3e-10 68.9 100 41.0
Sopen01g037270 Solanum pennellii HOM05D000017 ORTHO05D000013 4.3e-10 68.9 175 29.7
Sopen05g022560 Solanum pennellii HOM05D000017 ORTHO05D000013 4.3e-10 68.9 176 27.8
Sopen11g029160 Solanum pennellii HOM05D000017 ORTHO05D000013 4.3e-10 68.9 175 29.7
Nitab4.5_0000854g0030 Nicotiana tabacum HOM05D008401 ORTHO05D002765 5.6e-10 68.6 48 72.9
Nitab4.5_0001992g0110 Nicotiana tabacum HOM05D008401 ORTHO05D002765 7.3e-10 68.2 48 79.2
Nitab4.5_0000231g0410 Nicotiana tabacum HOM05D006864 ORTHO05D002765 9.5e-10 67.8 179 30.2
Nitab4.5_0000425g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.6e-09 67.0 167 32.3
Nitab4.5_0004824g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.6e-09 67.0 174 28.7
Nitab4.5_0007029g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.6e-09 67.0 98 34.7
CANSAT78G2408 Cannabis sativa HOM05D000017 ORTHO05D000013 2.1e-09 66.6 113 28.3
Sopen06g004080 Solanum pennellii HOM05D000017 ORTHO05D000013 2.1e-09 66.6 175 29.1
Sopen09g012340 Solanum pennellii HOM05D006864 ORTHO05D000013 2.1e-09 66.6 175 29.7
CANSAT01G2097 Cannabis sativa HOM05D010396 ORTHO05D002765 2.8e-09 66.2 106 32.1
CANSAT11G2236 Cannabis sativa HOM05D010396 ORTHO05D002765 2.8e-09 66.2 106 32.1
Nitab4.5_0000786g0280 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.8e-09 66.2 176 26.7
Sopen09g015530 Solanum pennellii HOM05D006864 ORTHO05D002765 2.8e-09 66.2 98 37.8
CANSAT21G1820 Cannabis sativa HOM05D010396 ORTHO05D002765 3.6e-09 65.9 106 32.1
Nitab4.5_0003408g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.6e-09 65.9 173 30.6
Sopen06g002940 Solanum pennellii HOM05D000017 ORTHO05D000013 4.7e-09 65.5 178 28.1
CANSAT35G0692 Cannabis sativa HOM05D010396 ORTHO05D002765 6.2e-09 65.1 215 25.1
Nitab4.5_0003114g0100 Nicotiana tabacum HOM05D006864 ORTHO05D002765 6.2e-09 65.1 174 29.9
Sopen02g001070 Solanum pennellii HOM05D000017 ORTHO05D000013 6.2e-09 65.1 178 28.1
Sopen02g032130 Solanum pennellii HOM05D000629 ORTHO05D000013 6.2e-09 65.1 178 28.1
Sopen12g019990 Solanum pennellii HOM05D000017 ORTHO05D000013 6.2e-09 65.1 178 28.1
CANSAT25G1832 Cannabis sativa HOM05D010396 ORTHO05D002765 8.0e-09 64.7 106 31.1
CANSAT64G1880 Cannabis sativa HOM05D010396 ORTHO05D002765 8.0e-09 64.7 106 32.1
Nitab4.5_0000228g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.1e-08 64.3 79 41.8
Nitab4.5_0006001g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.1e-08 64.3 164 32.3
Sopen10g022230 Solanum pennellii HOM05D000017 ORTHO05D000013 1.1e-08 64.3 178 28.7
CANSAT35G0400 Cannabis sativa HOM05D010396 ORTHO05D002765 1.4e-08 63.9 128 29.7
CANSAT54G0083 Cannabis sativa HOM05D010396 ORTHO05D000013 1.4e-08 63.9 106 31.1
Nitab4.5_0010096g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.4e-08 63.9 98 35.7
Nitab4.5_0014828g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.4e-08 63.9 188 29.8
CANSAT21G2439 Cannabis sativa HOM05D010396 ORTHO05D002765 1.8e-08 63.5 106 31.1
CANSAT25G2859 Cannabis sativa HOM05D010396 ORTHO05D002765 1.8e-08 63.5 106 31.1
CANSAT35G0346 Cannabis sativa HOM05D010396 ORTHO05D002765 1.8e-08 63.5 128 29.7
CANSAT80G0794 Cannabis sativa HOM05D010396 ORTHO05D002765 1.8e-08 63.5 106 31.1
Nitab4.5_0020188g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.8e-08 63.5 174 26.4
Nitab4.5_0001047g0120 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.3e-08 63.2 72 47.2
Nitab4.5_0002806g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.0e-08 62.4 178 28.7
Nitab4.5_0006179g0060 Nicotiana tabacum HOM05D007248 ORTHO05D002765 4.0e-08 62.4 180 27.8
Sopen10g005080 Solanum pennellii HOM05D000017 ORTHO05D000013 4.0e-08 62.4 178 27.0
Solyc10g047821.1 Solanum lycopersicum HOM05D007248 ORTHO05D002765 5.2e-08 62.0 113 30.1
CANSAT64G1249 Cannabis sativa HOM05D010396 ORTHO05D002765 8.9e-08 61.2 95 31.6
Sopen05g006380 Solanum pennellii HOM05D000017 ORTHO05D000013 8.9e-08 61.2 174 29.3
Nitab4.5_0002297g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.2e-07 60.8 155 29.7
Nitab4.5_0005092g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.5e-07 60.5 186 29.6
Nitab4.5_0011890g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.6e-07 59.7 87 35.6
Nitab4.5_0000138g0190 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.4e-07 59.3 74 39.2
Sopen06g004330 Solanum pennellii HOM05D000017 ORTHO05D000013 3.4e-07 59.3 174 28.7
Nitab4.5_0000516g0080 Nicotiana tabacum HOM05D007248 ORTHO05D002765 4.4e-07 58.9 180 23.3
Nitab4.5_0002993g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 4.4e-07 58.9 179 30.2
Nitab4.5_0005376g0100 Nicotiana tabacum HOM05D006864 ORTHO05D002765 9.8e-07 57.8 172 27.3
Sopen03g024940 Solanum pennellii HOM05D006864 ORTHO05D002765 9.8e-07 57.8 106 33.0
Nitab4.5_0012894g0030 Nicotiana tabacum HOM05D006864 ORTHO05D000013 1.3e-06 57.4 137 32.1
Nitab4.5_0004697g0110 Nicotiana tabacum HOM05D006864 ORTHO05D000013 1.7e-06 57.0 179 29.6
Nitab4.5_0001030g0050 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.2e-06 56.6 176 26.7
Nitab4.5_0000425g0150 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.7e-06 55.8 133 27.1
Peaxi162Scf00106g02222 Petunia axillaris HOM05D006864 ORTHO05D002765 3.7e-06 55.8 144 26.4
Nitab4.5_0005412g0060 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.9e-06 55.5 80 36.2
Nitab4.5_0002461g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 6.4e-06 55.1 212 22.6
Peaxi162Scf00184g00211 Petunia axillaris HOM05D006864 ORTHO05D002765 6.4e-06 55.1 144 25.7
Sopen04g019350 Solanum pennellii HOM05D006864 ORTHO05D000013 6.4e-06 55.1 168 27.4
PGSC0003DMG400009287 Solanum tuberosum HOM05D006864 ORTHO05D002765 6.4e-06 55.1 115 30.4
Nitab4.5_0012202g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 8.3e-06 54.7 70 41.4


User provided reference genes

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