Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000821g0030 Nicotiana tabacum HOM05D001767 ORTHO05D001714 5.8e-43 177.2 91 100.0
Prupe.6G047800 Prunus persica HOM05D001767 ORTHO05D001714 1.9e-14 82.4 88 61.4
Peaxi162Scf00055g00161 Petunia axillaris HOM05D001767 ORTHO05D001714 6.3e-13 77.4 96 61.5
Sopen06g002300 Solanum pennellii HOM05D001767 ORTHO05D001714 1.2e-11 73.2 93 57.0
Solyc06g007370.1 Solanum lycopersicum HOM05D001767 ORTHO05D001714 4.5e-11 71.2 94 56.4
Peaxi162Scf00053g00082 Petunia axillaris HOM05D001767 ORTHO05D001714 5.9e-11 70.9 91 54.9
QL01p026098 Quercus lobata HOM05D001767 ORTHO05D001714 2.9e-10 68.6 92 57.6
ClCG02G019220 Citrullus lanatus HOM05D001767 ORTHO05D001714 3.8e-10 68.2 93 50.5
Phvul.006G074200 Phaseolus vulgaris HOM05D001767 ORTHO05D001714 5.0e-10 67.8 99 48.5
MD03G1057000 Malus domestica HOM05D001767 ORTHO05D001714 6.5e-10 67.4 88 54.5
CsaV3_6G018940 Cucumis sativus L. HOM05D001767 ORTHO05D001714 1.1e-09 66.6 93 50.5
MELO3C025688.2 Cucumis melo HOM05D001767 ORTHO05D001714 1.4e-09 66.2 95 51.6
PGSC0003DMG400020549 Solanum tuberosum HOM05D001767 ORTHO05D001714 3.2e-09 65.1 100 53.0
Thecc.09G358400 Theobroma cacao HOM05D001767 ORTHO05D001714 3.2e-09 65.1 91 56.0
Oeu050020.1 Olea europaea HOM05D001767 ORTHO05D001714 1.6e-08 62.8 89 49.4
Nn2g11025 Nelumbo nucifera HOM05D001767 ORTHO05D001714 2.1e-08 62.4 97 54.6
Sed0020267 Sechium edule HOM05D001767 ORTHO05D001714 3.6e-08 61.6 84 53.6
MD11G1058700 Malus domestica HOM05D001767 ORTHO05D001714 4.7e-08 61.2 88 50.0
Glyma.11G163800 Glycine max HOM05D001767 ORTHO05D001714 6.1e-08 60.8 105 44.8
Nitab4.5_0009660g0010 Nicotiana tabacum HOM05D001767 ORTHO05D001714 6.1e-08 60.8 90 53.3
Lalb_Chr04g0251911 Lupinus albus HOM05D001767 ORTHO05D001714 7.9e-08 60.5 84 51.2
Potri.013G153100 Populus trichocarpa HOM05D001767 ORTHO05D001714 7.9e-08 60.5 95 51.6
arahy.Tifrunner.gnm1.ann1.ADC2ZV Arachis hypogaea HOM05D001767 ORTHO05D001714 1.0e-07 60.1 100 49.0
arahy.Tifrunner.gnm1.ann1.K9E1NX Arachis hypogaea HOM05D001767 ORTHO05D001714 1.0e-07 60.1 100 49.0
CiPaw.13G068600 Carya illinoinensis HOM05D001767 ORTHO05D001714 1.0e-07 60.1 94 45.7
RcHm_v2.0_Chr5g0071711 Rosa chinensis HOM05D001767 ORTHO05D001714 1.0e-07 60.1 94 48.9
CSS0019780 Camellia sinensis var. sinensis HOM05D001767 ORTHO05D001714 1.4e-07 59.7 89 49.4
Lalb_Chr18g0051411 Lupinus albus HOM05D001767 ORTHO05D001714 1.4e-07 59.7 97 48.5
Oeu007789.1 Olea europaea HOM05D001767 ORTHO05D001714 1.4e-07 59.7 81 51.9
PSO384G2891 Papaver somniferum HOM05D001767 ORTHO05D001714 1.4e-07 59.7 104 49.0
Rhsim13G0063600 Rhododendron simsii HOM05D001767 ORTHO05D001714 1.4e-07 59.7 97 47.4
Ciclev10003692m.g Citrus clementina HOM05D001767 ORTHO05D001714 1.8e-07 59.3 93 45.2
DCAR_012266 Daucus carota HOM05D001767 ORTHO05D001714 2.3e-07 58.9 97 49.5
FAN11G3179 Fragaria x ananassa HOM05D001767 ORTHO05D001714 2.3e-07 58.9 95 47.4
FAN16G1848 Fragaria x ananassa HOM05D001767 ORTHO05D001714 2.3e-07 58.9 95 47.4
FAN21G2420 Fragaria x ananassa HOM05D001767 ORTHO05D001714 2.3e-07 58.9 95 47.4
Potri.019G123900 Populus trichocarpa HOM05D001767 ORTHO05D001714 2.3e-07 58.9 96 50.0
FvH4_3g39820 Fragaria vesca HOM05D001767 ORTHO05D001714 3.0e-07 58.5 95 47.4
Manes.02G217100 Manihot esculenta HOM05D001767 ORTHO05D001714 3.0e-07 58.5 92 50.0
Nitab4.5_0001060g0010 Nicotiana tabacum HOM05D001767 ORTHO05D001714 3.0e-07 58.5 85 51.8
PSO339G0033 Papaver somniferum HOM05D001767 ORTHO05D001714 3.0e-07 58.5 104 45.2
GSVIVG01024628001 Vitis vinifera HOM05D001767 ORTHO05D001714 3.0e-07 58.5 69 58.0
FAN25G0410 Fragaria x ananassa HOM05D001767 ORTHO05D001714 3.9e-07 58.2 95 46.3
Aqoxy1G01274 Aquilegia oxysepala HOM05D001767 ORTHO05D001714 5.1e-07 57.8 93 47.3
Duzib168G0893 Durio zibethinus HOM05D001767 ORTHO05D001714 6.7e-07 57.4 89 51.7
Glyma.18G057000 Glycine max HOM05D001767 ORTHO05D001714 6.7e-07 57.4 103 42.7
Ca_05675_v3 Cicer arietinum L. HOM05D001767 ORTHO05D001714 8.8e-07 57.0 98 42.9
Ca_15012_v3 Cicer arietinum L. HOM05D001767 ORTHO05D001714 8.8e-07 57.0 107 43.0
Haze_24418 Corylus avellana HOM05D001767 ORTHO05D001714 8.8e-07 57.0 83 50.6
Sabra19G0122400 Salix brachista HOM05D001767 ORTHO05D001714 8.8e-07 57.0 98 50.0
Sabra19G0132000 Salix brachista HOM05D001767 ORTHO05D001714 8.8e-07 57.0 98 50.0
Sabra13G0123100 Salix brachista HOM05D001767 ORTHO05D001714 1.1e-06 56.6 95 50.5
Eucgr.B04008 Eucalyptus grandis HOM05D001767 ORTHO05D001714 1.5e-06 56.2 93 47.3
Nn2g13272 Nelumbo nucifera HOM05D001767 ORTHO05D001714 2.0e-06 55.8 102 44.1
CiPaw.14G053800 Carya illinoinensis HOM05D001767 ORTHO05D001714 2.6e-06 55.5 96 46.9
COL.COLO4_11161 Corchorus olitorius HOM05D001767 ORTHO05D001714 2.6e-06 55.5 90 52.2
CiPaw.14G054000 Carya illinoinensis HOM05D001767 ORTHO05D001714 3.3e-06 55.1 96 46.9
Gohir.D08G220500 Gossypium hirsutum HOM05D001767 ORTHO05D001714 3.3e-06 55.1 83 43.4
TPR.G25720 Trifolium pratense HOM05D001767 ORTHO05D001714 3.3e-06 55.1 95 47.4
Migut.D00844 Erythranthe guttata HOM05D001767 ORTHO05D001714 4.4e-06 54.7 82 47.6
TWI79G1459 Tripterygium wilfordii HOM05D001767 ORTHO05D001714 5.7e-06 54.3 84 50.0
Gohir.A08G203400 Gossypium hirsutum HOM05D001767 ORTHO05D001714 7.4e-06 53.9 83 43.4
Gorai.004G234400 Gossypium raimondii HOM05D001767 ORTHO05D001714 7.4e-06 53.9 83 43.4
Aa31LG1G8010 Aethionema arabicum HOM05D001767 ORTHO05D001714 9.7e-06 53.5 89 43.8
AL4G25060 Arabidopsis lyrata HOM05D001767 ORTHO05D001714 9.7e-06 53.5 113 39.8
TAR633G0198 Trochodendron aralioides HOM05D001767 ORTHO05D001714 9.7e-06 53.5 91 47.3


User provided reference genes

Program Settings