Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000820g0010 Nicotiana tabacum HOM05D006369 ORTHO05D007764 1.3e-112 409.8 215 100.0
Nitab4.5_0000001g0150 Nicotiana tabacum HOM05D006369 ORTHO05D007764 7.7e-102 374.0 215 94.4
CAN.G317.12 Capsicum annuum HOM05D006369 ORTHO05D007764 5.0e-85 318.2 214 82.7
Solyc03g062680.3 Solanum lycopersicum HOM05D006369 ORTHO05D007764 1.2e-83 313.5 217 82.0
Sopen03g015000 Solanum pennellii HOM05D006369 ORTHO05D007764 8.0e-83 310.8 217 81.1
Peaxi162Scf00076g00928 Petunia axillaris HOM05D006369 ORTHO05D007764 1.0e-82 310.5 291 62.2
Dinv29169 Davidia involucrata HOM05D006369 ORTHO05D007764 7.7e-62 241.1 209 63.6
CiPaw.05G237500 Carya illinoinensis HOM05D006369 ORTHO05D007764 7.3e-60 234.6 218 59.2
CsaV3_4G008720 Cucumis sativus L. HOM05D006369 ORTHO05D007764 1.6e-59 233.4 208 62.0
Manes.08G163800 Manihot esculenta HOM05D006369 ORTHO05D007764 1.6e-59 233.4 209 60.3
Cc02_g00390 Coffea canephora HOM05D006369 ORTHO05D007764 2.1e-59 233.0 213 60.1
Ciclev10021854m.g Citrus clementina HOM05D006369 ORTHO05D007764 4.7e-59 231.9 211 60.2
MELO3C024871.2 Cucumis melo HOM05D006369 ORTHO05D007764 4.7e-59 231.9 208 62.0
ClCG10G009050 Citrullus lanatus HOM05D006369 ORTHO05D007764 5.2e-58 228.4 208 60.6
FvH4_7g33790 Fragaria vesca HOM05D006369 ORTHO05D007764 1.5e-57 226.9 207 60.4
MD07G1306400 Malus domestica HOM05D006369 ORTHO05D007764 1.5e-57 226.9 207 59.9
MSTRG.8579 Avicennia marina HOM05D006369 ORTHO05D007764 2.0e-57 226.5 203 60.6
Lj1A1033G61 Lonicera japonica HOM05D006369 ORTHO05D007764 4.4e-57 225.3 209 61.7
FAN01G2653 Fragaria x ananassa HOM05D006369 ORTHO05D007764 5.7e-57 224.9 207 60.4
FAN10G1961 Fragaria x ananassa HOM05D006369 ORTHO05D007764 5.7e-57 224.9 207 59.9
FAN10G2535 Fragaria x ananassa HOM05D006369 ORTHO05D007764 5.7e-57 224.9 207 59.9
TAR365G0740 Trochodendron aralioides HOM05D006369 ORTHO05D007764 5.7e-57 224.9 206 57.8
Cfa015892 Carpinus fangiana HOM05D006369 ORTHO05D007764 7.5e-57 224.6 211 62.6
Prupe.2G324400 Prunus persica HOM05D006369 ORTHO05D007764 1.3e-56 223.8 207 58.5
Atru.chr7.1119 Acer truncatum HOM05D006369 ORTHO05D007764 1.7e-56 223.4 210 58.1
Actinidia00694 Actinidia chinensis HOM05D006369 ORTHO05D007764 1.7e-56 223.4 208 60.1
FAN03G1142 Fragaria x ananassa HOM05D006369 ORTHO05D007764 1.4e-55 220.3 207 58.9
FAN03G2967 Fragaria x ananassa HOM05D006369 ORTHO05D007764 1.4e-55 220.3 207 58.9
CiPaw.06G019700 Carya illinoinensis HOM05D006369 ORTHO05D007764 2.4e-55 219.5 202 58.9
MD01G1234200 Malus domestica HOM05D006369 ORTHO05D007764 3.2e-55 219.2 206 60.2
RcHm_v2.0_Chr1g0383921 Rosa chinensis HOM05D006369 ORTHO05D007764 3.2e-55 219.2 207 58.5
Migut.F00102 Erythranthe guttata HOM05D006369 ORTHO05D007764 2.0e-54 216.5 209 59.3
CSS0035893 Camellia sinensis var. sinensis HOM05D006369 ORTHO05D007764 3.5e-54 215.7 227 54.6
CARHR196110 Cardamine hirsuta HOM05D006369 ORTHO05D007764 4.6e-54 215.3 213 57.7
Gorai.001G204600 Gossypium raimondii HOM05D006369 ORTHO05D007764 7.8e-54 214.5 210 60.0
THA.LOC104820876 Tarenaya hassleriana HOM05D006369 ORTHO05D007764 3.0e-53 212.6 209 56.5
Hund18049 Selenicereus undatus HOM05D006369 ORTHO05D007764 3.9e-53 212.2 214 57.5
Thecc.03G000800 Theobroma cacao HOM05D006369 ORTHO05D007764 3.9e-53 212.2 210 56.7
Gohir.D07G184401 Gossypium hirsutum HOM05D006369 ORTHO05D007764 6.6e-53 211.5 210 59.0
CANSAT21G0373 Cannabis sativa HOM05D006369 ORTHO05D007764 8.6e-53 211.1 206 56.8
Gohir.A07G176900 Gossypium hirsutum HOM05D006369 ORTHO05D007764 8.6e-53 211.1 213 58.2
Potri.019G052400 Populus trichocarpa HOM05D006369 ORTHO05D007764 8.6e-53 211.1 216 54.6
SalBow4G3280 Salvia bowleyana HOM05D006369 ORTHO05D007764 8.6e-53 211.1 209 55.5
Sed0025457 Sechium edule HOM05D006369 ORTHO05D007764 1.5e-52 210.3 211 59.2
Thhalv10014449m.g Eutrema salsugineum HOM05D006369 ORTHO05D007764 2.5e-52 209.5 220 54.5
BcaC03g18532 Brassica carinata HOM05D006369 ORTHO05D007764 3.3e-52 209.1 220 56.8
C02p08760 Brassica napus HOM05D006369 ORTHO05D007764 3.3e-52 209.1 220 56.8
BolC2t06790H Brassica oleracea HOM05D006369 ORTHO05D007764 3.3e-52 209.1 220 56.8
A02p03940 Brassica napus HOM05D006369 ORTHO05D007764 5.6e-52 208.4 209 56.9
BcaNung00427 Brassica carinata HOM05D006369 ORTHO05D007764 1.6e-51 206.8 219 54.8
BraA02t05358Z Brassica rapa HOM05D006369 ORTHO05D007764 1.6e-51 206.8 210 57.6
Carub.0006s1525 Capsella rubella HOM05D006369 ORTHO05D007764 2.3e-50 203.0 212 55.7
HanXRQChr17g0541681 Helianthus annuus HOM05D006369 ORTHO05D007764 2.3e-50 203.0 209 55.0
Lalb_Chr19g0139881 Lupinus albus HOM05D006369 ORTHO05D007764 4.0e-50 202.2 216 52.8
AL6G28090 Arabidopsis lyrata HOM05D006369 ORTHO05D007764 5.2e-50 201.8 196 57.7
Sp6g27090 Schrenkiella parvula HOM05D006369 ORTHO05D007764 5.2e-50 201.8 200 58.0
Oeu005324.1 Olea europaea HOM05D006369 ORTHO05D007764 8.9e-50 201.1 169 68.0
VMungo1127G0993 Vigna mungo HOM05D006369 ORTHO05D007764 2.6e-49 199.5 206 56.8
Phvul.011G021200 Phaseolus vulgaris HOM05D006369 ORTHO05D007764 4.4e-49 198.7 201 58.2
GSVIVG01024423001 Vitis vinifera HOM05D006369 ORTHO05D007764 4.4e-49 198.7 172 59.3
BcaB01g04960 Brassica carinata HOM05D006369 ORTHO05D007764 5.8e-49 198.4 208 54.8
Haze_00598 Corylus avellana HOM05D006369 ORTHO05D007764 7.5e-49 198.0 182 64.3
AT5G17070 Arabidopsis thaliana HOM05D006369 ORTHO05D007764 9.8e-49 197.6 207 53.1
Glyma.11G092500 Glycine max HOM05D006369 ORTHO05D007764 9.8e-49 197.6 205 56.1
Psat7g171520 Pisum sativum HOM05D006369 ORTHO05D007764 1.7e-48 196.8 206 52.9
Aa31LG11G12610 Aethionema arabicum HOM05D006369 ORTHO05D007764 2.9e-48 196.1 209 54.5
Duzib211G0044 Durio zibethinus HOM05D006369 ORTHO05D007764 3.7e-48 195.7 210 53.8
Glyma.12G018800 Glycine max HOM05D006369 ORTHO05D007764 2.4e-47 193.0 201 54.7
Ah.08g212670 Amaranthus hybridus HOM05D006369 ORTHO05D007764 4.1e-47 192.2 216 53.7
Lsat_1_v5_gn_3_37940 Lactuca sativa HOM05D006369 ORTHO05D007764 2.0e-46 189.9 223 52.5
Nn3g21321 Nelumbo nucifera HOM05D006369 ORTHO05D007764 3.5e-46 189.1 218 50.9
Aqoxy2G03109 Aquilegia oxysepala HOM05D006369 ORTHO05D007764 7.8e-46 188.0 207 51.2
vmacro02505 Vaccinium macrocarpon HOM05D006369 ORTHO05D007764 7.8e-46 188.0 247 47.8
EL10Ac7g17391 Beta vulgaris HOM05D006369 ORTHO05D007764 1.0e-45 187.6 212 53.8
Ca_04928_v3 Cicer arietinum L. HOM05D006369 ORTHO05D007764 1.0e-45 187.6 206 51.5
SGA_v2.0_scaffold18G08505 Striga asiatica HOM05D006369 ORTHO05D007764 6.6e-45 184.9 209 51.2
ECA246G2850 Erigeron canadensis HOM05D006369 ORTHO05D007764 4.7e-43 178.7 213 50.7
PGR042G2784 Punica granatum HOM05D006369 ORTHO05D007764 6.2e-43 178.3 223 50.7
TPR.G39567 Trifolium pratense HOM05D006369 ORTHO05D007764 8.1e-43 177.9 212 49.1
arahy.Tifrunner.gnm1.ann1.WFP97B Arachis hypogaea HOM05D006369 ORTHO05D007764 1.4e-42 177.2 235 46.4
Medtr4g077610 Medicago truncatula HOM05D006369 ORTHO05D007764 1.4e-42 177.2 178 55.1
Eucgr.A02962 Eucalyptus grandis HOM05D006369 ORTHO05D007764 5.2e-42 175.3 199 51.3
Lj3g0017971 Lotus japonicus HOM05D006369 ORTHO05D007764 6.8e-42 174.9 211 48.8
Psat1g047200 Pisum sativum HOM05D006369 ORTHO05D007764 8.9e-42 174.5 149 59.1
MBI06_g08525_MAGBIO Magnolia biondii HOM05D006369 ORTHO05D007764 2.6e-41 172.9 182 53.8
Sc05g0004440 Simmondsia chinensis HOM05D006369 ORTHO05D007764 1.7e-40 170.2 180 55.6
arahy.Tifrunner.gnm1.ann1.F9R2PF Arachis hypogaea HOM05D006369 ORTHO05D007764 1.9e-39 166.8 250 43.6
Psat1g047280 Pisum sativum HOM05D006369 ORTHO05D007764 1.9e-39 166.8 131 62.6
unitig_747.g21708 Utricularia gibba HOM05D006369 ORTHO05D007764 2.7e-38 162.9 255 42.7
PSO170G0520 Papaver somniferum HOM05D006369 ORTHO05D007764 7.8e-38 161.4 206 48.5
PSO210G6912 Papaver somniferum HOM05D006369 ORTHO05D007764 1.0e-37 161.0 206 48.5
Psat1g047240 Pisum sativum HOM05D006369 ORTHO05D007764 1.7e-37 160.2 120 65.8
DCAR_020401 Daucus carota HOM05D006369 ORTHO05D007764 6.6e-37 158.3 211 46.0
Rhsim13G0016700 Rhododendron simsii HOM05D006369 ORTHO05D007764 8.6e-37 157.9 283 40.6
HPP92_026820 Vanilla planifolia HOM05D006369 ORTHO05D007764 1.3e-32 144.1 179 44.1
BraA03t10137Z Brassica rapa HOM05D006369 ORTHO05D007764 3.8e-32 142.5 169 47.9
Os06g0300700 Oryza sativa ssp. japonica HOM05D006369 ORTHO05D007764 1.9e-31 140.2 198 43.4
Zm00001eb381130 Zea mays HOM05D006369 ORTHO05D007764 1.2e-30 137.5 205 41.5
CDE02G3455 Ceratophyllum demersum HOM05D006369 ORTHO05D007764 2.1e-30 136.7 210 40.0
SEGI_01011 Sequoiadendron giganteum HOM05D006369 ORTHO05D007764 2.7e-30 136.3 132 51.5
ATR0213G006 Amborella trichopoda HOM05D006369 ORTHO05D007764 7.3e-28 128.3 165 48.5
Pp3c20_5600 Physcomitrium patens HOM05D006369 ORTHO05D007764 8.4e-24 114.8 222 36.5
CBR_g17900 Chara braunii HOM05D006369 ORTHO05D007764 3.5e-22 109.4 169 41.4
AagrBONN_evm.TU.Sc2ySwM_344.1770 Anthoceros agrestis HOM05D006369 ORTHO05D007764 1.3e-21 107.5 250 34.0
COL.COLO4_13442 Corchorus olitorius HOM05D006369 ORTHO05D007764 5.1e-21 105.5 194 42.3
PGSC0003DMG401008641 Solanum tuberosum HOM05D006369 ORTHO05D007764 5.1e-21 105.5 97 71.1
Mapoly0084s0069 Marchantia polymorpha HOM05D006369 ORTHO05D007764 1.9e-20 103.6 196 38.3
PGSC0003DMG402008641 Solanum tuberosum HOM05D006369 ORTHO05D007764 6.2e-19 98.6 50 88.0
Dinv06133 Davidia involucrata HOM05D006369 ORTHO05D007764 1.8e-18 97.1 71 64.8
Hma1.2p1_1235F.1_g269100 Hydrangea macrophylla HOM05D006369 ORTHO05D007764 9.9e-17 91.3 148 47.3
SMO141G0301 Selaginella moellendorffii HOM05D006369 ORTHO05D007764 2.2e-16 90.1 158 36.7
BolC3t13440H Brassica oleracea HOM05D006369 ORTHO05D007764 2.3e-13 80.1 123 49.6
RcHm_v2.0_Chr5g0041771 Rosa chinensis HOM05D006369 ORTHO05D007764 2.3e-13 80.1 68 52.9
C03p09390 Brassica napus HOM05D006369 ORTHO05D007764 1.1e-12 77.8 115 47.8
Cpa.g.sc39.77 Carica papaya HOM05D006369 ORTHO05D007764 1.5e-12 77.4 50 68.0
Lsat_1_v5_gn_5_27580 Lactuca sativa HOM05D005974 ORTHO05D007201 1.5e-12 77.4 77 53.2
BcaB01g05232 Brassica carinata HOM05D006369 ORTHO05D007764 1.9e-12 77.0 115 47.8
Sabra19G0056300 Salix brachista HOM05D006369 ORTHO05D007764 2.6e-09 66.6 96 45.8
Sabra19G0056200 Salix brachista HOM05D006369 ORTHO05D007764 7.6e-09 65.1 49 73.5
Cre10.g463700 Chlamydomonas reinhardtii HOM05D006369 ORTHO05D007764 2.2e-08 63.5 146 34.2
A03p08120 Brassica napus HOM05D006369 ORTHO05D007764 7.1e-07 58.5 171 35.1
Sabra19G0056100 Salix brachista HOM05D006369 ORTHO05D007764 3.5e-06 56.2 49 46.9


User provided reference genes

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