Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000816g0080 Nicotiana tabacum HOM05D006894 ORTHO05D008724 1.5e-242 842.4 421 100.0
Nitab4.5_0010336g0030 Nicotiana tabacum HOM05D006894 ORTHO05D008724 1.4e-227 792.7 410 95.9
CAN.G798.8 Capsicum annuum HOM05D006894 ORTHO05D008724 5.3e-208 727.6 420 88.6
Solyc01g104060.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 3.8e-206 721.5 420 86.7
Sopen01g046470 Solanum pennellii HOM05D006894 ORTHO05D008724 1.6e-204 716.1 418 86.6
PGSC0003DMG400023767 Solanum tuberosum HOM05D006894 ORTHO05D008724 2.4e-192 675.6 438 81.1
Peaxi162Scf00017g02640 Petunia axillaris HOM05D006894 ORTHO05D008724 8.3e-185 650.6 348 92.0
Peaxi162Scf00011g00531 Petunia axillaris HOM05D006894 ORTHO05D008724 3.6e-180 635.2 380 84.5
QL02p099211 Quercus lobata HOM05D006894 ORTHO05D008724 4.4e-170 601.7 377 75.1
Cfa005507 Carpinus fangiana HOM05D006894 ORTHO05D008724 7.8e-167 590.9 364 76.6
Ciclev10001270m.g Citrus clementina HOM05D006894 ORTHO05D008724 1.8e-163 579.7 372 73.9
CANSAT11G1074 Cannabis sativa HOM05D006894 ORTHO05D008724 2.4e-163 579.3 409 70.4
Oeu027798.1 Olea europaea HOM05D006894 ORTHO05D008724 3.1e-163 578.9 415 69.9
Atru.chr6.599 Acer truncatum HOM05D006894 ORTHO05D008724 6.8e-163 577.8 377 74.0
Atru.chr6.614 Acer truncatum HOM05D006894 ORTHO05D008724 1.2e-162 577.0 377 74.0
GSVIVG01022874001 Vitis vinifera HOM05D006894 ORTHO05D008724 5.8e-162 574.7 393 72.5
Lsat_1_v5_gn_9_118621 Lactuca sativa HOM05D006894 ORTHO05D008724 7.6e-162 574.3 367 74.7
Gohir.A03G193500 Gossypium hirsutum HOM05D006894 ORTHO05D008724 2.2e-161 572.8 371 72.5
Thecc.02G114400 Theobroma cacao HOM05D006894 ORTHO05D008724 2.9e-161 572.4 415 67.0
TAR628G1558 Trochodendron aralioides HOM05D006894 ORTHO05D008724 4.9e-161 571.6 362 76.2
MD08G1235500 Malus domestica HOM05D006894 ORTHO05D008724 1.9e-160 569.7 365 73.2
VMungo0251G0921 Vigna mungo HOM05D006894 ORTHO05D008724 3.2e-160 568.9 377 72.4
Glyma.05G168900 Glycine max HOM05D006894 ORTHO05D008724 5.4e-160 568.2 376 72.6
Gohir.D02G214600 Gossypium hirsutum HOM05D006894 ORTHO05D008724 5.4e-160 568.2 371 72.2
Gorai.005G242400 Gossypium raimondii HOM05D006894 ORTHO05D008724 5.4e-160 568.2 371 72.2
Phvul.002G249600 Phaseolus vulgaris HOM05D006894 ORTHO05D008724 5.4e-160 568.2 407 68.1
CiPaw.05G048800 Carya illinoinensis HOM05D006894 ORTHO05D008724 2.1e-159 566.2 416 66.6
Duzib248G0689 Durio zibethinus HOM05D006894 ORTHO05D008724 3.5e-159 565.5 391 69.3
RcHm_v2.0_Chr7g0221781 Rosa chinensis HOM05D006894 ORTHO05D008724 6.0e-159 564.7 399 69.9
Prupe.1G571400 Prunus persica HOM05D006894 ORTHO05D008724 7.8e-159 564.3 359 74.4
Migut.B00823 Erythranthe guttata HOM05D006894 ORTHO05D008724 1.3e-158 563.5 375 73.3
TWI14G1412 Tripterygium wilfordii HOM05D006894 ORTHO05D008724 5.1e-158 561.6 371 70.6
COL.COLO4_11781 Corchorus olitorius HOM05D006894 ORTHO05D008724 6.6e-158 561.2 378 72.0
FAN08G3638 Fragaria x ananassa HOM05D006894 ORTHO05D008724 8.6e-158 560.8 408 66.9
Nn1g08851 Nelumbo nucifera HOM05D006894 ORTHO05D008724 2.5e-157 559.3 364 72.0
TPR.G23092 Trifolium pratense HOM05D006894 ORTHO05D008724 5.6e-157 558.1 403 68.2
Manes.07G017700 Manihot esculenta HOM05D006894 ORTHO05D008724 7.3e-157 557.8 369 72.6
arahy.Tifrunner.gnm1.ann1.7VS6FJ Arachis hypogaea HOM05D006894 ORTHO05D008724 1.2e-156 557.0 373 71.0
arahy.Tifrunner.gnm1.ann1.NZQI89 Arachis hypogaea HOM05D006894 ORTHO05D008724 1.6e-156 556.6 373 71.0
PSO528G0189 Papaver somniferum HOM05D006894 ORTHO05D008724 2.8e-156 555.8 384 70.6
CsaV3_6G037480 Cucumis sativus L. HOM05D006894 ORTHO05D008724 1.1e-155 553.9 363 72.5
HanXRQChr09g0249011 Helianthus annuus HOM05D006894 ORTHO05D008724 1.1e-155 553.9 369 71.0
Lalb_Chr12g0204471 Lupinus albus HOM05D006894 ORTHO05D008724 1.1e-155 553.9 366 71.0
Psat7g062040 Pisum sativum HOM05D006894 ORTHO05D008724 1.8e-155 553.1 399 68.4
Medtr8g088790 Medicago truncatula HOM05D006894 ORTHO05D008724 2.4e-155 552.7 396 67.9
PSO170G1552 Papaver somniferum HOM05D006894 ORTHO05D008724 2.4e-155 552.7 368 72.0
Lj9A304G82 Lonicera japonica HOM05D006894 ORTHO05D008724 3.1e-155 552.4 407 67.6
Ca_17824_v3 Cicer arietinum L. HOM05D006894 ORTHO05D008724 6.9e-155 551.2 360 72.2
Eucgr.G00568 Eucalyptus grandis HOM05D006894 ORTHO05D008724 3.4e-154 548.9 413 65.9
AT1G60990 Arabidopsis thaliana HOM05D006894 ORTHO05D008724 1.3e-153 547.0 375 69.9
Carub.0002s0422 Capsella rubella HOM05D006894 ORTHO05D008724 6.4e-153 544.7 375 69.9
AL2G15470 Arabidopsis lyrata HOM05D006894 ORTHO05D008724 2.4e-152 542.7 375 69.9
CARHR052050 Cardamine hirsuta HOM05D006894 ORTHO05D008724 9.3e-152 540.8 410 65.6
Sp2g03530 Schrenkiella parvula HOM05D006894 ORTHO05D008724 1.2e-151 540.4 375 69.3
vmacro01754 Vaccinium macrocarpon HOM05D006894 ORTHO05D008724 1.6e-151 540.0 461 61.6
Thhalv10023478m.g Eutrema salsugineum HOM05D006894 ORTHO05D008724 2.7e-151 539.3 375 69.1
Cc02_g22630 Coffea canephora HOM05D006894 ORTHO05D008724 3.5e-151 538.9 429 65.7
Aqoxy6G00238 Aquilegia oxysepala HOM05D006894 ORTHO05D008724 4.6e-151 538.5 364 70.1
ECA240G3758 Erigeron canadensis HOM05D006894 ORTHO05D008724 1.0e-150 537.3 373 69.7
DCAR_006702 Daucus carota HOM05D006894 ORTHO05D008724 3.0e-150 535.8 392 67.3
MSTRG.20303 Avicennia marina HOM05D006894 ORTHO05D008724 1.1e-149 533.9 389 68.9
THA.LOC104809620 Tarenaya hassleriana HOM05D006894 ORTHO05D008724 4.3e-149 531.9 410 64.4
A01p29780 Brassica napus HOM05D006894 ORTHO05D008724 9.6e-149 530.8 360 69.2
C01p37610 Brassica napus HOM05D006894 ORTHO05D008724 1.6e-148 530.0 360 69.4
BcaC09g49347 Brassica carinata HOM05D006894 ORTHO05D008724 2.1e-148 529.6 360 69.4
Aa31LG2G9600 Aethionema arabicum HOM05D006894 ORTHO05D008724 4.9e-145 518.5 423 61.5
Lj4g0002387 Lotus japonicus HOM05D006894 ORTHO05D008724 1.9e-144 516.5 340 70.6
Sed0001229 Sechium edule HOM05D006894 ORTHO05D008724 9.3e-144 514.2 341 72.4
FAN18G4164 Fragaria x ananassa HOM05D006894 ORTHO05D008724 2.1e-143 513.1 415 62.7
PGR042G0448 Punica granatum HOM05D006894 ORTHO05D008724 3.9e-142 508.8 414 62.6
CDE08G1218 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 1.1e-141 507.3 360 66.7
ATR0665G083 Amborella trichopoda HOM05D006894 ORTHO05D008724 1.9e-141 506.5 360 67.5
Sc15g0002580 Simmondsia chinensis HOM05D006894 ORTHO05D008724 3.3e-141 505.8 366 66.9
FvH4_5g29120 Fragaria vesca HOM05D006894 ORTHO05D008724 1.6e-140 503.4 378 65.9
Actinidia39033 Actinidia chinensis HOM05D006894 ORTHO05D008724 2.1e-140 503.1 345 72.2
Rhsim11G0128300 Rhododendron simsii HOM05D006894 ORTHO05D008724 3.7e-140 502.3 455 59.6
FAN04G0479 Fragaria x ananassa HOM05D006894 ORTHO05D008724 3.4e-138 495.7 378 65.1
MBI06_g01072_MAGBIO Magnolia biondii HOM05D006894 ORTHO05D008724 1.6e-135 486.9 536 51.3
Actinidia30531 Actinidia chinensis HOM05D006894 ORTHO05D008724 4.0e-131 472.2 349 68.2
BcaB04g20304 Brassica carinata HOM05D006894 ORTHO05D008724 6.9e-131 471.5 360 63.1
SEGI_07604 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 1.0e-129 467.6 362 61.6
Dinv19376 Davidia involucrata HOM05D006894 ORTHO05D008724 3.9e-126 455.7 288 76.7
Mapoly0039s0108 Marchantia polymorpha HOM05D006894 ORTHO05D008724 1.7e-116 423.7 369 54.2
MELO3C014368.2 Cucumis melo HOM05D006894 ORTHO05D008724 2.2e-113 413.3 403 54.1
AagrBONN_evm.TU.Sc2ySwM_344.1590 Anthoceros agrestis HOM05D006894 ORTHO05D007218 2.9e-113 412.9 326 58.3
Haze_01731 Corylus avellana HOM05D006894 ORTHO05D008724 1.1e-112 411.0 432 50.9
Pp3c9_20800 Physcomitrium patens HOM05D006894 ORTHO05D008724 2.2e-105 386.7 360 51.4
CSS0024184 Camellia sinensis var. sinensis HOM05D006894 ORTHO05D008724 1.1e-104 384.4 364 56.9
SMO119G0367 Selaginella moellendorffii HOM05D006894 ORTHO05D008724 5.5e-104 382.1 346 52.6
FAN13G2283 Fragaria x ananassa HOM05D006894 ORTHO05D008724 2.1e-103 380.2 378 53.7
CBR_g30837 Chara braunii HOM05D000019 ORTHO05D000048 9.1e-99 364.8 401 48.6
unitig_749.g14128 Utricularia gibba HOM05D006894 ORTHO05D008724 5.0e-97 359.0 313 59.4
BolC1t03726H Brassica oleracea HOM05D006894 ORTHO05D008724 1.6e-95 354.0 234 71.4
BraA01t03106Z Brassica rapa HOM05D006894 ORTHO05D008724 3.6e-95 352.8 234 70.5
SEGI_10844 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 1.5e-80 304.3 319 50.2
Rhsim09G0048600 Rhododendron simsii HOM05D006894 ORTHO05D008724 1.6e-66 257.7 400 41.2
Cre12.g552850 Chlamydomonas reinhardtii HOM05D006894 ORTHO05D008724 6.0e-66 255.8 376 38.8
Cpa.g.sc30.18 Carica papaya HOM05D006894 ORTHO05D008724 1.6e-50 204.5 129 74.4
ClCG09G014030 Citrullus lanatus HOM05D006894 ORTHO05D008724 1.6e-47 194.5 125 69.6
Rhsim09G0016000 Rhododendron simsii HOM05D006894 ORTHO05D008724 2.3e-41 174.1 183 50.3
BcaB01g03502 Brassica carinata HOM05D006894 ORTHO05D008724 1.5e-37 161.4 144 56.9
BcaB05g23073 Brassica carinata HOM05D006894 ORTHO05D008724 1.1e-35 155.2 108 66.7
CAN.G798.10 Capsicum annuum HOM05D006894 ORTHO05D008724 7.1e-27 125.9 180 46.7
ClCG09G014040 Citrullus lanatus HOM05D006894 ORTHO05D008724 1.0e-25 122.1 79 67.1
BcaB02g10691 Brassica carinata HOM05D000189 ORTHO05D000474 1.8e-25 121.3 125 50.4
Cpa.g.sc30.19 Carica papaya HOM05D006894 ORTHO05D008724 1.8e-25 121.3 111 55.0
PRCOL_00004673 Prasinoderma coloniale HOM05D006894 ORTHO05D008724 1.5e-24 118.2 376 27.1
Pp3c5_7230 Physcomitrium patens HOM05D006894 ORTHO05D008724 3.3e-24 117.1 178 39.3
Solyc09g015460.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 9.6e-24 115.5 67 80.6
unitig_749.g14127 Utricularia gibba HOM05D006894 ORTHO05D008724 1.1e-22 112.1 76 69.7
Duzib052G1224 Durio zibethinus HOM05D006894 ORTHO05D008724 2.4e-22 110.9 85 64.7
ClCG09G014050 Citrullus lanatus HOM05D006894 ORTHO05D008724 3.2e-19 100.5 101 60.4
Glyma.08G127500 Glycine max HOM05D006894 ORTHO05D008724 3.0e-17 94.0 99 46.5
Peaxi162Scf01350g00016 Petunia axillaris HOM05D006894 ORTHO05D008724 1.1e-14 85.5 53 75.5
Cpa.g.sc3656.1 Carica papaya HOM05D006894 ORTHO05D008724 3.4e-13 80.5 58 69.0
Phvul.006G148700 Phaseolus vulgaris HOM05D004784 ORTHO05D005762 2.2e-12 77.8 333 24.3
CDE06G1775 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 4.2e-11 73.6 224 27.2
CAN.G536.1 Capsicum annuum HOM05D006894 ORTHO05D000067 1.3e-07 62.0 32 84.4


User provided reference genes

Program Settings